sp|Q39211|NRPB3_ARATH ----> DNA-directed RNA polymerases II, IV and V subunit 3
Intron 1 GTGAGCATTA ... CTTGAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 83.24 | 47 | 200 | 267 |
| A2 | 76.89 | 52 | 155 | 191 |
| A3 | 78.46 | 49 | 167 | 190 |
| A4 | 77.63 | 51 | 168 | 186 |
| A5 | 73.41 | 23 | 56 | 71 |
| A6 | 75.75 | 209 | 612 | 694 |
| A7 | 72.11 | 364.5 | 913 | 972 |
| A8 | 76.5 | 378.5 | 1125 | 1340 |
| A9 | 75.84 | 318 | 937 | 1058.5 |
| A10 | 73.64 | 232.5 | 665 | 634 |
>TRINITY_DN112748_c0_g2_i2 from sample A3 / Example spliced isoformGCAAAATGGTCACCAGCTGCAACAGTTACTTTTATGTATGAGCCTGATATTCACATTAATGAAAATTTGATGGAGACTTTAACTCTTGATGAAAAGCGGGATTGGATTGAGAGCTGTCCTACGAAAGTTTTTGATATTAATCCAGATACACAACAGGTGGTTGTGTTCGATGCTGAAGCATACGCCTATGATGATGAGGT
CATCAAGAAAGCTGAGGCGATGGGAAAGCCAGGACTTTTAGGCTGTCACCAGAAACTGAAGAAGATGATGCACAATTTATTGATTTAGAGCAGCACATGAGAGGTGGAGGTGGAAGATGATTTCGTGATGCATATGTGGTATCTACTTGAACCGATTTTCACTTTAATTTGCATTAAAGTGCTTGCCGCTTTGTTCTGTA
AAATATCGCCGTACAACAGTGCTTCAATCTTTGCAACCTTTTTGGCTATGGCCATTTTTGATGGAAGAAATTCCCAAGGTCAAAATAATATATTAAAGATTGTAACTACTACAGTGCTCTTCCTACAATGCACACACAAAATCGGTGGACTTGAATTATATTTCATGAGTGGGAGCATTGGGAAAACCTATTGCTGGCTT
TGTAAATTACCGGATATGATGTGCTTATCTGAAACTCTTATTGAATATGACTCATATTTATAATCACATTGAATGCAAACAGTCTTGGTTTC
>TRINITY_DN112748_c0_g2_i3 from sample A3 / Example unspliced isoform:GCAAAACGTTCTTCCTCCCCTTTCAGTAAAATCAGCTGCTACTGTGTGCGTAAAGGCAAGGGTAGGTGCAGGGAAATATGGAGGGCCAAGGGCAAATGTCATCCTCCTACCAGCGCTTTCCGACAGTCAAAATTCGGGAACTGAAGGACGACTACATGAAGTTCGAGCTGAAGAACACGGATCCCTCCATCGCCAACGCC
CTACGCAGGGTGATGATTGCAGAAGTACCCACCATTGCCATTGACCTTGTTGAAATTGAGAGCAACTCCTCGGTCCTCAACGACGAGTTTCTTGCGCACAGGCTCGGCTTGATTCCCCTCATCAGCGAACGCGCCATGGAAATGCGGTACTCCCGCGATTGCGACACGTGTGATGGCGACGCTCAGTGCCATTATTGTTC
GGTGGAGTTTAAGCTCAACGTGAAATGCGACGGCGATCAAACCCTAGACGTCACGAGCTTAGATCTTGTGTCTTCCGATATGAGAGATAATCCCGTCGTCGCCGTGGACCGTGCTGCCGATATGAACGTCTTCGACGCTTCTGAACTAAGGGGCATAATCATTGTGAAACTTCGACGTGGCCAGGAATTGAGGCTTCGTG
CAATAGCCAGAAAGGGTATTGGTAAGGACCATGCAAAATGGTCACCAGCTGCAACAGTTACTTTTATGTATGAGCCTGATATTCACATTAATGAAAATTTGATGGAGACTTTAACTCTTGATGAAAAGCGGGATTGGATTGAGAGCTGTCCTACGAAAGTTTTTGATATTAATCCAGATACACAACAGGTGGTTGTGTTC
GATGCTGAAGCATACGCCTATGATGATGAGGTCATCAAGAAAGCTGAGGCGATGGGAAAGCCAGGACTTgtgagcattaatgccagagatgatagttttatattcactgttgaaaccacaggagcactcaaagcttctcaattgtttcttaatgctattgatatccttaaacataaacttgaaacagTTAGGCTGTCACC
AGAAACTGAAGAAGATGATGCACAATTTATTGATTTAGAGCAGCACATGAGAGGTGGAGGTGGAAGATGATTTCGTGATGCATATGTGGTATCTACTTGAACCGATTTTCACTTTAATTTGCATTAAAGTGCTTGCCGCTTTGTTCTGTAAAATATCGCCGTACAACAGTGCTTCAATCTTTGCAACCTTTTTGGCTATG
GCCATTTTTGATGGAAGAAATTCCCAAGGTCAAAATAATATATTAAAGATTGTAACTACTACAGTGCTCTTCCTACAATGCACACACAAAATCGGTGGACTTGAATTATATTTCATGAGTGGGAGCATTGGGAAAACCTATTGCTGGCTTTGTAAATTACCGGATATGATGTGCTTATCTGAAACTCTTATTGAATATGA
CTCATATTTATAATCACATTGAATGCAAACAGTCTTGGTTTC