sp|Q9FF52|RL123_ARATH ----> Large ribosomal subunit protein uL11x
Intron 1 GTAATTGAAA ... CATGAAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.93 | 69 | 95 | 22 |
| A2 | 71.43 | 30 | 75 | 18 |
| A3 | 69.71 | 53 | 122 | 17 |
| A4 | 68.64 | 37 | 81 | 15 |
| A5 | 66.36 | 37 | 73 | 18 |
| A6 | 65.92 | 635 | 1228 | 103 |
| A7 | 55.99 | 290 | 369 | 75 |
| A8 | 57.3 | 351 | 471 | 40 |
| A9 | 61.94 | 322 | 524 | 52 |
| A10 | 58.09 | 189 | 262 | 51 |
>TRINITY_DN35643_c0_g3_i1 from sample A6 / Example spliced isoformGGAATGCATAATGCAAATGTTTACTCACGGACCTAAAACCCTAAATCCCCCAAAACCTGCAATCAAAGGGCCCATATTCAACAATCAACGCGCACCGTCGATCGTAGGGTTTGTAGAACCTTAAAATCAGATAGGGTTCAGGGGTTTTCTTCCTTTCATTTAGTAGGTTTTATTAATTCGGAGTCGGGGATCAGGTGGAT
TTAGATTTGCAGAGAGCGGCCAGTAGTAGCAAGAGTAGGGAAGAATCTCTAGGGTGTTTTGAAAAATTTGACAGTCATGCCTCCCAAGCTCGATCCTTCCCAAGTGGTCGAAGTGTACGTGAGGGTCACAGGGGGCGAAGTGGGAGCAGCTTCGTCTCTTGCCCCAAAGATCGGTCCTCTGGGTCTCTCGCCCAAGAAGA
TCGGAGAAGACATTGCAAAGGAAACGGCAAAGGACTGGAAGGGTTTGAGGGTGACGGTAAAGCTCACTGTTCAGAACAGGCAGGCCAAAGTCGCCGTGGTGCCGAGCGCCGCTGCCCTGGTCATAAAAGCCCTCAAGGAGCCCGAGAGAGACAGGAAGAAGACGAAGAACATCAAGCACAATGGAAATATCGGCCTCGAC
GATGTCATTGAGATCGCTAAGGTTATGAAGCCGAGGTCCATGGCGAAGGAATTGGCCGGGACGGTGAAGGAGATTCTAGGCACATGCCTTTCCGTTGGCTGCACCGTGGATGGAAAGGATCCCAAGGATCTCCAGACCGAGATTGATGAAGGAGAGGTCGAGATCCCCGAAGAATGAAGAGCGGATTTTAATTTGAAGTT
TGATCGAATTCATCGGTTGGAGCAATGCCATCAAGCAATTATTATTTTCTGCAAATGCAAAGGGAAACGAATCCAGAAACTAATGCATTCCTTTTTCCATTCCTTGAAGGCCTGTCTCATCGAGAGTACCTCCTCCTTTGTTTTAAGAAATCATAACAAATATAGTCAGGGATTTTGGTTAAGGAACTTGGGTTTGTAAT
ATCACGTTTATGTTGGGAGTATGAGTGGTATTTTTTGTGGTAATACGAGGTTTTTAGTTCATTGGACTACAAGTTTTCTATTTATCATTTGAGAATGTGTTATTTGCTTGTGGTTATATGAATGTTGTTCGTTGGAG
>TRINITY_DN35643_c0_g3_i4 from sample A6 / Example unspliced isoform:GGAATGCATAATGCAAATGTTTACTCACGGACCTAAAACCCTAAATCCCCCAAAACCTGCAATCAAAGGGCCCATATTCAACAATCAACGCGCACCGTCGATCGTAGGGTTTGTAGAACCTTAAAATCAGATAGGGTTCAGGGGTTTTCTTCCTTTCATTTAGTAGGTTTTATTAATTCGGAGTCGGGGATCAGGTGGAT
TTAGATTTGCAGAGAGCGGCCAGTAGTAGCAAGAGTAGGGAAGAATCTCTAGGGTGTTTTGAAAAATTTGACAGTCATGCCTCCCAAGCTCGATCCTTCCCAAGTGGTCGAAGTGTACGTGAGGGTCACAGGGGGCGAAGTGGGAGCAGCTTCGTCTCTTGCCCCAAAGATCGGTCCTCTGGGTCTCTCGCCCAAGAAGA
TCGGAGAAGACATTGCAAAGGAAACGGCAAAGGACTGGAAGGGTTTGAGGGTGACGGTAAAGCTCACTGTTCAGAACAGGCAGGCCAAAGTCGCCGTGGTGCCGAGCGCCGCTGCCCTGGTCATAAAAGCCCTCAAGGAGCCCGAGAGAGACAGGAAGAAGACGAAGAACATCAAGCACAATGGAAATATCGGCCTCGAC
GATGTCATTGAGATCGCTAAGGTTATGAAGCCGAGGTCCATGGCGAAGGAATTGGCCGGGACGGTGAAGGAGATTCTAGGCACATGCCTTTCCGTTGGCTGCACCGTGGATGGAAAGGATCCCAAGGATCTCCAGACCGAGATTGATGAAGGAGAGGTCGAGATCCCCGAAGAATGAAGAGCGGATTTTAATTTGgtaat
tgaaatgcaagccttttattatttttattgtcgggcatttgttcgttttgtttagggtttttaatgtttgagaaagtcgaaaactggaaaaaggtgccctgttaatttatttcagggcctcgagggttttgagacatttaggggcctgtgaatttgatttcaggccctggaggttttgagactttttgcacttttttgaa
gacttggggtatttatataatatatgtacttgccgatccgctaaatgttgaaagaatttgttggaagagaaattattgtttgacattataattagggttttctaattttactgctgtattacatggattgcagtatgttagtgtcgtgtgggtaggtattgtcgtgtgggtaggttaatgtaagttattagaagcagagt
ttgttcgatgggcaatgacgactatgatatgaagtgttttgtatgtttttggaagtataaatgctctgttttcatattccttgtcgttttatgtattattggttacaaaacaaaaatgtgcaaatggacatagatctatcttttctgattgcatgaagcagAAGTTTGATCGAATTCATCGGTTGGAGCAATGCCATCAA
GCAATTATTATTTTCTGCAAATGCAAAGGGAAACGAATCCAGAAACTAATGCATTCCTTTTTCCATTCCTTGAAGGCCTGTCTCATCGAGAGTACCTCCTCCTTTGTTTTAAGAAATCATAACAAATATAGTCAGGGATTTTGGTTAAGGAACTTGGGTTTGTAATATCACGTTTATGTTGGGAGTATGAGTGGTATTTT
TTGTGGTAATACGAGGTTTTTAGTTCATTGGACTACAAGTTTTCTATTTATCATTTGAGAATGTGTTATTTGCTTGTGGTTATATGAATGTTGTTCGTTGGAG