NA ----> NA

Intron 1 GTAGGTATTC ... ACATCTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	45.45	6	8	2
A2	100	0	2	7
A3	52.38	5	4	7
A4	57.14	6	12	4
A5	100	0	1	2
A6	41.67	28	26	14
A7	48.15	14	14	12
A8	48.67	29	38	17
A9	44.16	43	42	26
A10	42.47	21	19	12

>TRINITY_DN126132_c1_g1_i3 from sample A1 / Example spliced isoform

AACTTAGAATTTTCTGTCAGGATCCTGGAAGACGCCTGCAAGGATGATGTGGAGCTTCGTGAAATAATTGGAGATGCTATGGGCAATGCTGATTTGATGAAGCAACGGATAGAGGAGAGGGTGAAAAGGAAAGGAAGAGACTTTTTGCAACCAAAAACAGGATCTGTGGTGGCCACGAAAATTATCTTTAGAGATTTTAA
TCCCACTGATTCCTACATATGGATTGAACTATATGCTGCTCCATCAGATAAAGATTTGGATTTCATTGGTCGTACTATTCGTTCTTGGTACGTGCTTGGTAGGTTGGGAGGTTTCAATTCTACAAATTTGCAGTTGACAGAGTTAGGAATAAATGAGAAACCGAGGTACAGTTTGGCTCAAGCATCAAAAGCACTTCCTG
CATCCTTCCATGATATAAGTAATGTTGAGTTTCAGGACAACCTGGGCCGGTTTTGGGTGGACATGGGAACTGCTGATGTATTAGCATTGGATATATTGATCAATGCTCTCTTAGGCTTGAACTCAGATTATGTTGGTATTAAGCAACTTGTTTTTGGTGGAGCACGCTTTGGGGATTGGGAACAAGGCATGACATCTGTT
GAATATGGTTACAGAGTTTACAAAATTTGAACTCACTTACTTGTACATAAGATTCCTAGATCACAGGCTTTGAAAAAACATTTCAGAGGAGCTTCCTGACTGTAAATTACTACACTCAAAAAGTAGATAGCACTCAGTTTATGGTCTCCCATTATGAGAGATATCATAGTTAAAGTATGTGCTTCAATGTTGAAGAAATT
TTAGGCATGTGTTATGAAAATACCTCACATGCATTTTGGAATCAAAATTAATCATGTG

>TRINITY_DN126132_c1_g1_i4 from sample A1 / Example unspliced isoform:

AGTCAGTTTTTGCAGTGAGTTAAGCATTTTTTCTACTTTGGCAGTTATGTTGGTATTAAGCAACTTGTTTTTGGTGGAGCACGCTTTGGGGATTGGGAACAAGGCATGACATCTGTTGAATATGGTTACAGAGTTTACAAAATTTGAACTCACTTACTTGTACATAAGATTCCTAGATCACAGgtaggtattccattttc
agtatcacacgtattgttctcaattggagaatgaaacacttttcttatcactgtctacaaacataaacatctgcagGCTTTGAAAAAACATTTCAGAGGAGCTTCCTGACTGTAAATTACTACACTCAAAAAGTAGATAGCACTCAGTTTATGGTCTCCCATTATGAGAGATATCATAGTTAAAGTATGTGCTTCAATGT
TGAAGAAATTTTAGGCATGTGTTATGAAAATACCTCACATGCATTTTGGAATCAAAATTAATCATGTG