sp|Q5JJY4|P2C04_ORYSJ ----> Protein kinase and PP2C-like domain-containing protein
Intron 1 GTAATCCTGC ... ATATAAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52 | 12 | 8 | 18 |
| A2 | 50 | 2 | 1 | 3 |
| A3 | 57.14 | 3 | 1 | 7 |
| A4 | 47.37 | 5 | 5 | 4 |
| A5 | 100 | 0 | 2 | 3 |
| A6 | 50 | 2 | 1 | 3 |
| A7 | 37.93 | 9 | 1 | 10 |
| A8 | 49.02 | 13 | 8 | 17 |
| A9 | 54.55 | 5 | 5 | 7 |
| A10 | 40 | 9 | 4 | 8 |
>TRINITY_DN33136_c0_g1_i2 from sample A9 / Example spliced isoformGTTATGAGTATTCTGAAGCGGATTAAAAAAACAAAATCTCACTCCAGACCGCTCTCATGTGATGCACATAATCATGTTATGAATATTCTGAAGCGGATTGGATCTGGGATTTGTCCACAGCGATTCTCCAATGTTGCCGAAGCATGCCACCACATAACAATAACTAGAAGAGTCTCCCAGCGAATCCTCTCATTATCATG
CGCTAAATTATCCAAACGAAGTGGCTGCGAACAACATATCTCAACTGAAGTTGGCAGCAATCCGTGATTGGCGAGCGCTCTGTGAAGATGCCGGAAGCAGAGGCCATTCCATCGAATACATGCGTGCGGGGGTGCTGTAACATCGACACCGTTCGCCTCTCTCTTCCCAGTTCTTCTTTTAAATTGCTTTCCCAGATTGC
CAGAGGCTCTGAGAGCGTTGTTTATGAGGCATTGTTAGAAGGAGACAAAGTGGCAGCAAAGAAACCCATTTTATCTACTGCAGAAGATATCGACCGTTTTCATAAAGAATTGCAAATTTTATGTAAGTTGGATCATCCTAGCATATCAAATTTGGTGGCAGCAAATGCAAGACCCCCAAATTACATGTTTTTCTTCCCCT
TCTATGAGAATGGTAGCTTGGCTCAAGCTTTGCATGTTAAGGAATGGAATCCATCTGTGGAGCAAATACTAACAATAACAATACAACTAGCCAGGGCTTTGGAGTACCTTCATAAACTTGGAATTGTCCATAGGGATGTTAAACCTGCAAATATTCTTCTTGACAACAAATTGGAAGCACACCTTGCAGACTTTGGATTG
GCAGTATATGGAAAAGATCTTGAAAAGACAACTGTACAAAATTGGAAGTCATCTGGGAAACCAACTGGGGGTTTTCATAAAAAGAACATGGTTGGAACACTTATTTATATGGCACCAGAAGTACTCAAAAAAGAAATACATACGGAAAAGTCAGATATATATAGTTTTGCAATCACAATCAATGAACTCGTGACAGGAGT
TGTTCCTTACACTGACCTTCGGACTGAGGCTCAGGCTCATACAGTACTAGAAATGACTTATACTGAACAACAACTTACAGCAGCTATTACCTCTGAGGGATTACGCCCAGTACTTGCTGGTCCAGAGTCAGGGCTCCCATCCAGTCTGTTGTCACTAATACAGCTTTGCTGGGATGGAGGTACTAGAAAATAAGAACAGA
GATGGTAATTCTATTTTGGATGCAAACCAACCGTGTCCAACCCCAATTAGCTGTAACGATCAAAATCAAGTGGATATCAATTGGTCACTTCAGGGGGCAATAAATGCAGAGAAACGGCAATCTGATGATCAGTTTACTGTTAAGAAGTGGCTTAAACCTTTAGCTGAACAGGCTGTGTATCATCCAACATTATCATGGGG
TTCATTTGCCACTTGTGGTAGGCGAGAAACCATGGAGGACACACACTTTCTGTTGCCTCATTTGGGAAATGAGAAACATGTCTTTGCATTTGGGATCTTCGATGGTCATCGAGGTGCTGCAGCTGCACAGTTTGCAGTAAATGCTATGCCAGGAGTTTTGTATTCAGTCAGTTCATTCCAAAGCCCATCAGAAGCATTGG
TGAATGCATTTATCAGAACAGACATCTTGTTCCGTGATGAACTGGAATTGCATTGTTATACAACGAAAGGTAGACGTAAGGATTGGCACCCTGGTTGCACTGCTGCAGTAGCATTGATTGTAGAAAACAGGGTTTTTGTAGCAAATGCTGGTGACTGTAGGACAATTTTGTGCAGAAAAGGACATGCAGTTGCTCTTAGT
AAGGACCATGTTGCAAGCTGCGTGGAAGAAAGAGATCGAGTCATCAAAGCAGGAGGACAGGTTAAATGGCAAATAGATACTTGGCGTGTTGGTTCAGCCGCTCTCCAGGTTACACGTTCCATTGGAGATGACGATGTGAAGCCAGCAGTAACTGCGGAGCCAGAAGTTACAGAGACTATATTATCAACAGATGATGAATT
CTTGGTGATGGCAAGTGATGGACTTTGGGATATAATAAGCAATGAAGAAGTTATATCTATTATCAAAGATACTGTTAAAGAACCTGGCATGTGCTCTAAAAGACTTGCAACAGAGGCCGTTGAAAGAGGGAGTAAAGATAATATAACAGTAATTGTTATTTTTCTTCGTCCAGTCTCAACTGCAGAGCGAATCTATTGAT
TATGATCATAAGGTCCAAGTTAGCGAGGAACAAAAGACTTTTTCGCTTTCCATAAGTTGATTGGCCTGATAATTTGGTGTTCACACCTACAACAACGTCTATTTTTTATTCTATACACCTACAACAAAAGACTTACTCATGCTTTCCTGTCTTCTCTTAAATACACGGTTGATATTCTATGATGTAGTCGCCGAAAATAA
AATTAAAAATTATTTATGAATATTTTAAACATGCGTTTATTGTTTATTTGATCATTTGAATGGCAGCATGAACGAATGCTTTAACTACAAGTTGTACAAGCAAGGAAAGCAGTGCCATATCCAATTGTTCTACAAAACTTATGAAGATGAATAGTAATACGTATTGTGTAAGATAATGTGGATTAATAATAGTGTGGTTG
GACGCTACGACAATAGAGCATACAAGAAATCAATTACTATCTACCAATAAGTTGCTATAAGTTGAC
>TRINITY_DN33136_c0_g1_i1 from sample A9 / Example unspliced isoform:GTTATGAGTATTCTGAAGCGGATTAAAAAAACAAAATCTCACTCCAGACCGCTCTCATGTGATGCACATAATCATGTTATGAATATTCTGAAGCGGATTGGATCTGGGATTTGTCCACAGCGATTCTCCAATGTTGCCGAAGCATGCCACCACATAACAATAACTAGAAGAGTCTCCCAGCGAATCCTCTCATTATCATG
CGCTAAATTATCCAAACGAAGTGGCTGCGAACAACATATCTCAACTGAAGTTGGCAGCAATCCGTGATTGGCGAGCGCTCTGTGAAGATGCCGGAAGCAGAGGCCATTCCATCGAATACATGCGTGCGGGGGTGCTGTAACATCGACACCGTTCGCCTCTCTCTTCCCAGTTCTTCTTTTAAATTGCTTTCCCAGATTGC
CAGAGGCTCTGAGAGCGTTGTTTATGAGGCATTGTTAGAAGGAGACAAAGTGGCAGCAAAGAAACCCATTTTATCTACTGCAGAAGATATCGACCGTTTTCATAAAGAATTGCAAATTTTATGTAAGTTGGATCATCCTAGCATATCAAATTTGGTGGCAGCAAATGCAAGACCCCCAAATTACATGTTTTTCTTCCCCT
TCTATGAGAATGGTAGCTTGGCTCAAGCTTTGCATGTTAAGGAATGGAATCCATCTGTGGAGCAAATACTAACAATAACAATACAACTAGCCAGGGCTTTGGAGTACCTTCATAAACTTGGAATTGTCCATAGGGATGTTAAACCTGCAAATATTCTTCTTGACAACAAATTGGAAGCACACCTTGCAGACTTTGGATTG
GCAGTATATGGAAAAGATCTTGAAAAGACAACTGTACAAAATTGGAAGTCATCTGGGAAACCAACTGGGGGTTTTCATAAAAAGAACATGGTTGGAACACTTATTTATATGGCACCAGAAGTACTCAAAAAAGAAATACATACGGAAAAGTCAGATATATATAGTTTTGCAATCACAATCAATGAACTCGTGACAGGAGT
TGTTCCTTACACTGACCTTCGGACTGAGGCTCAGGCTCATACAGTACTAGAAATGACTTATACTGAACAACAACTTACAGCAGCTATTACCTCTGAGGGATTACGCCCAGTACTTGCTGGTCCAGAGTCAGGGCTCCCATCCAGTCTGTTGTCACTAATACAGCTTTGCTGGGATGgtaatcctgcacagcgcccttcct
ttgattttttggttaaaagcttggaattaattattgttcaatataagcagGAGGTACTAGAAAATAAGAACAGAGATGGTAATTCTATTTTGGATGCAAACCAACCGTGTCCAACCCCAATTAGCTGTAACGATCAAAATCAAGTGGATATCAATTGGTCACTTCAGGGGGCAATAAATGCAGAGAAACGGCAATCTGAT
GATCAGTTTACTGTTAAGAAGTGGCTTAAACCTTTAGCTGAACAGGCTGTGTATCATCCAACATTATCATGGGGTTCATTTGCCACTTGTGGTAGGCGAGAAACCATGGAGGACACACACTTTCTGTTGCCTCATTTGGGAAATGAGAAACATGTCTTTGCATTTGGGATCTTCGATGGTCATCGAGGTGCTGCAGCTGC
ACAGTTTGCAGTAAATGCTATGCCAGGAGTTTTGTATTCAGTCAGTTCATTCCAAAGCCCATCAGAAGCATTGGTGAATGCATTTATCAGAACAGACATCTTGTTCCGTGATGAACTGGAATTGCATTGTTATACAACGAAAGGTAGACGTAAGGATTGGCACCCTGGTTGCACTGCTGCAGTAGCATTGATTGTAGAAA
ACAGGGTTTTTGTAGCAAATGCTGGTGACTGTAGGACAATTTTGTGCAGAAAAGGACATGCAGTTGCTCTTAGTAAGGACCATGTTGCAAGCTGCGTGGAAGAAAGAGATCGAGTCATCAAAGCAGGAGGACAGGTTAAATGGCAAATAGATACTTGGCGTGTTGGTTCAGCCGCTCTCCAGGTTACACGTTCCATTGGA
GATGACGATGTGAAGCCAGCAGTAACTGCGGAGCCAGAAGTTACAGAGACTATATTATCAACAGATGATGAATTCTTGGTGATGGCAAGTGATGGACTTTGGGATATAATAAGCAATGAAGAAGTTATATCTATTATCAAAGATACTGTTAAAGAACCTGGCATGTGCTCTAAAAGACTTGCAACAGAGGCCGTTGAAAG
AGGGAGTAAAGATAATATAACAGTAATTGTTATTTTTCTTCGTCCAGTCTCAACTGCAGAGCGAATCTATTGATTATGATCATAAGGTCCAAGTTAGCGAGGAACAAAAGACTTTTTCGCTTTCCATAAGTTGATTGGCCTGATAATTTGGTGTTCACACCTACAACAACGTCTATTTTTTATTCTATACACCTACAACA
AAAGACTTACTCATGCTTTCCTGTCTTCTCTTAAATACACGGTTGATATTCTATGATGTAGTCGCCGAAAATAAAATTAAAAATTATTTATGAATATTTTAAACATGCGTTTATTGTTTATTTGATCATTTGAATGGCAGCATGAACGAATGCTTTAACTACAAGTTGTACAAGCAAGGAAAGCAGTGCCATATCCAATT
GTTCTACAAAACTTATGAAGATGAATAGTAATACGTATTGTGTAAGATAATGTGGATTAATAATAGTGTGGTTGGACGCTACGACAATAGAGCATACAAGAAATCAATTACTATCTACCAATAAGTTGCTATAAGTTGAC