NA ----> NA
Intron 1 GTAGAGAAGC ... GTAATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 51 | 0 | 0 |
| A2 | 0 | 46.7 | 0 | 0 |
| A3 | 7.87 | 47.3 | 0 | 4 |
| A4 | 24.08 | 31.7 | 1 | 10 |
| A5 | 0 | 28.7 | 0 | 0 |
| A6 | 7.91 | 58.7 | 0 | 5 |
| A7 | 0 | 121.7 | 0 | 0 |
| A8 | 0 | 51 | 0 | 0 |
| A9 | 0 | 115.7 | 0 | 0 |
| A10 | 0 | 134.3 | 0 | 0 |
>TRINITY_DN98911_c0_g3_i5 from sample A4 / Example spliced isoformCGGCCACAATTGCTGCAGTAGCCCTCTTTTTCACAAGTGCCATCACAGCCCACAGCAATATCGATATCCCTCGCTTGAATTCAGCCAGCCGGGGGCGCGAGCCAGTCTTCTACCTCAAGTGCCAGTCTTCGACCTCAAGTGTTTGCTACATTCCATTTAGTTGTACACCATCGATCAATCAGTCAATGAAGGTGTCGTGG
ATAACTCCGGCTAGAGACTGCAATGCAAAACAGGCATGACCGGGAGTGAAAATTAAGTGTAGGAAGCAGAGGGGAGGGATGGCATTGGTGGTACCCTCTCAAACACAGCATTGTTCGTAGCACAGCTATTGGACCTGTTTTAAGAGTAAACTACCAATGTTTGAAGGCCTTATCATTTCAAGAGGATACCAAGAAGAATG
ATTCTAATGGAAGGGAAGGTAAAAAGTTGCGGAGTCTTCCAATGTATTTATATCGTGCATGGCAAGGAATGGAAGGGGCTGAAAAGAGTTCTCCCCAGTCAGCACGAGGTTCAAGTTGGTTCACTAAGTTACAAAAGCAGAATGTTATTGAGCTAACAAAGGAAATTTTACAAAAGCCACAATCCAGGCTGAAATTCCTA
GACAAAGATCAGATGATTAAGCAATTACAAGAGGCCCAATTGAACCACACCATTTTGGAGTTTTGGAAGAGTTCAGAAGTCTCGATCAAGTGGCCGTTGGCAGTATTCTTTTCTTGTTATGTTGCTATTACAGTCTTCTTTGGATTTCGTGCTTCCAGTGATCTACTCCCTTTGTGGATTATAGGGCCTCTTATGATGGG
CATCTTCATCAAATTATGTCAGATTGTTTATTCTAATTGCATACGCATCACAACCAATGCAGTAATTAAGGTAAAGGCTACATACATAGCTGCAAAGAATGGTGATATTACACGAGGCATGCAGTTGCAGTTTGAGCAATTTTTGGAGGGCAAAAGGTCTGAACTTGTGGGCTATTTGGACTACTTCAAGGGTGAGAGAT
TCAAGAAATTCTTGCAGAAAAAGCAGGAAGAATATAAAGAACGGATTTCAGAGGCCATACAGGATTATGCTGAGGCTAATTGGCCACGATGGCGTGCCACAACGAGATTCCTAAGAAAGATATTTCCCAAATAGGAACATCAAGATACATATATGTTCCTACTGGGGACTTGTTTTCACTTGAGTTTTGGTATAATATAT
ATTCTGCTATAAGTGAAATCATATTTATAGGTGCACCGTCGTCAATTTTAATGCTGAAATTTGCATTCTATGTCAAGACAGCTGTGGGTATCCGGAAACTATGCATGACTATTTTGTTATGTTAAAGAAATGTACTCGGATGCACCATAAAGAAACTGCAAAATGTGAGTGCAGAGAAAACACAACAGAATAGCACATCA
GATGCAGAACACTTCGGCAATTTGCACTGCTGTTTAACCTCGTTTGTATCCATTATTAGTGATAAAATTGTTGCCCATCTCTTTAAATGACTAGGGCTATACTTTTTTTTTTCCTATTTCAGCATTTTGAGCACGTCCAACTGTGCTTTTCTTGTATTTATTGCTTTGCGCT
>TRINITY_DN98911_c0_g3_i4 from sample A4 / Example unspliced isoform:TAGAGACTGCAATGCAAAACAGgtagagaagccgaaaagaggacaccaagatgagcccaaaaaagcaaaacaaatggttatttaacagaacatacacatacattcttaaaaactgtattttaagatttatggagctatgatgcactccgtacacgtgtttctttctcctttttcacgagggtttcgtaatcatatgggtt
gttattcgcttacggtaatatccattttgttttgtaatttcagGCATGACCGGGAGTGAAAATTAAGTGTAGGAAGCAGAGGGGAGGGATGGCATTGGTGGTACCCTCTCAAACACAGGTAATTCTCTTTCTTATCAAACTTAGGGTACCATGCTTTGCACGGTTGGTTTAATAATAATTGTGCAGGTGCTTGTGATTCC
TGTAGGAGAAAGTTATATACCATTAAGTTTCTGAACTAAAAATATGATAGCAAGTTGGATAAATGAAGGGAGAATGGCAGCATTTATATCTGTAACAGGCATGGAAAACAATGGGTGAAATCTAGATTGACAAAAAAACATTAAGAGGAATGTAAACACGAAGAATAACTGATTGCTTGACGAAAGACAAAACACCCAAT
AGTTTGTTGAATTCTTGAGCAGTGAAAAGACAATAGAAAACTGCACCATAGCTGCACGTAGTTGTTGAATTCTTGAGCAATTAAAAAACAATAGAAAACTGCATCATAGCTGCCCGTAAGAGTTGTAGAAACAATTCCAGGACCTTAATTGGGGTCTGCCACTTTGCCAATTTATTTGGTGTGTTCGATATTTTTTATGT
GCATGTGGGTATGTCTATTATCATGTGAAAAGAGTACTACAGAGTACTGCCAGCTAAGGATTTTTTAATTTTTGTCCTTCAAAAGAGGAGAGGGGAAGACTATGCAAGTAAGCATACTCACCTCATTCCCAATCAATCATTATGTAAGCTTAGTCATTTGAAATTTAAAATTGTTAAACATCATCGTCAGCCGACTTTTA
AAATTGTTAAATTTCATCGTTAGCCGACTTTTAAGTCTAATTTCAAGCTTTAACCCAAAAGGTTTTATTCTGGATATCTGACA