sp|B6EUB3|PDS5A_ARATH ----> Sister chromatid cohesion protein PDS5 homolog A
Intron 1 GTAAGTATTT ... ATGGTTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.44 | 17 | 6 | 5 |
| A2 | 30.77 | 9 | 7 | 1 |
| A3 | 35 | 13 | 10 | 4 |
| A4 | 47.37 | 5 | 5 | 4 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 33.33 | 1 | 1 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 0 | 3 | 0 | 0 |
| A10 | 0 | 2 | 0 | 0 |
>TRINITY_DN100436_c0_g2_i6 from sample A4 / Example spliced isoformAACAAGGGACGTTGGTGATATTATTGTATGAAATGTTCCAAATTCTGTGTTCTGTATTTCTTATGTACGCTATGAAGTATTTGAGAGGTTGCTATTTTGAAAATTTTAATTTGAAGAAAGCAATCATGGGTATATTAATATCATGTTCTTATGAATCTTTCTTAGATTCTGTGATTTGTCAATTTTGTTCCAGGATATTT
CTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTACCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTGACT
CAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAATCC
ATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACATTGG
AAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACATTGG
ATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCCCAA
AGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTTTTG
GCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTGCATTAAAGAGGGAGTGATGCACATT
TTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGA
TGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAA
CTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATA
AATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATTTGT
TGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGGTTCTCCAGAAATTGTTCTTAGTTATTTGATACACTCCCTGGCACACCATCCTGATTTTCCTGTTTCTAATAAAAGTTTATTCGCAGAAGCATTTGAGCCATTTTATCGGCAGTTGCATTTTTTTCTTTCAGAAA
TACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAAAGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAACACA
GGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCAATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGCTCC
AATCAGAGGTAAAAATGATGTTAACAAATAACATTTTTCAAAGAGGAGCAATAATAAATCAAATGAAAATTCGAAGTAAAGCATATATAGAAGCCCAAAAACTCCAGAAATTGTCATAGAACAGCTAGATTGTGGTTTGGATGCATCTAATAAATCACTGGTTTTTGGCATAATTGAAGAAGGTAAGGGACTGGATGCTG
AGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGTTATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGACAG
GGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAATCCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGAGAG
TTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATGATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAAAGC
CTTCAGAAAAGCATGGGAAGCAATCAAAAAGCAGGATAAAGGATGTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTCCAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGAC
AAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCAGACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTAC
AATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCAGATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATT
TAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATCAAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGTG
>TRINITY_DN100436_c0_g2_i7 from sample A4 / Example unspliced isoform:AACAAGGGACGTTGGTGATATTATTGTATGAAATGTTCCAAATTCTGTGTTCTGTATTTCTTATGTACGCTATGAAGTATTTGAGAGGTTGCTATTTTGAAAATTTTAATTTGAAGAAAGCAATCATGGGTATATTAATATCATGTTCTTATGAATCTTTCTTAGATTCTGTGATTTGTCAATTTTGTTCCAGGATATTT
CTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTACCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTGACT
CAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAATCC
ATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACATTGG
AAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACATTGG
ATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCCCAA
AGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTTTTG
GCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTGCATTAAAGAGGGAGTGATGCACATT
TTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGA
TGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAA
CTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATA
AATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATTTGT
TGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGGTTCTCCAGAAATTGTTCTTAGTTATTTGATACACTCCCTGGCACACCATCCTGATTTTCCTGTTTCTAATAAAAGTTTATTCGCAGAAGCATTTGAGCCATTTTATCGGCAGTTGCATTTTTTTCTTTCAGAAA
TACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAAAGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAACACA
GGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCAATTTTCCTCTCAAGTGATCAGgtaagtatttctgaatgtgcttaatgttttcttgttcaggattttggttt
ccatagggctaccagttatggattccttattcttttcaaatggttttagTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGCTCCAATCAGAGGTAAAAATGATGTTAACAAATAACATTTTTCAAAGAGGAGCAATAATAAATCAAATGAAAATTCGAAGTAAAGCATATATAGAAGCCCAAAAA
CTCCAGAAATTGTCATAGAACAGCTAGATTGTGGTTTGGATGCATCTAATAAATCACTGGTTTTTGGCATAATTGAAGAAGGTAAGGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAAT
GTTATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGA
ATCCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTA
TGATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAAAAGCAGGATAAAGGATGTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAA
GCATTGGTCCTTTCCAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAA
AAGGAAGCGAGGCAGACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCA
CTAAGGGGTCAGCAGATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCC
AGACAGAAACAATCAAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGTG
Intron 2 GTACGAGTTG ... GCATTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 47.83 | 12 | 11 | 3 |
| A2 | 33.33 | 22 | 11 | 2 |
| A3 | 41.38 | 17 | 12 | 0 |
| A4 | 8.33 | 11 | 1 | 2 |
| A5 | 30.77 | 9 | 4 | 0 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 50 | 2 | 2 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 0 | 1 | 0 | 0 |
| A10 | -1 | 0 | 0 | 0 |
>TRINITY_DN122354_c6_g1_i8 from sample A1 / Example spliced isoformTTTGAAGAAAGCAATCATGGGTATATTAATATCATGTTCTTATGAATCTTTCTTAGATTCTGTGATTTGTCAATTTTGTTCCAGGATATTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATC
TAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTGACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTC
TCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAATCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAAT
TATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACATTGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGA
CAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACATTGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGG
AAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCCCAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACT
ATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTTTTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGT
TTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTGCATTAAAGAGGGAGTGATGCACATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATG
CAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTT
CTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGA
AGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGACTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTC
ACAGTAAATATGCATGTGCTTTTGTACTTAGC
>TRINITY_DN122354_c6_g1_i3 from sample A1 / Example unspliced isoform:GGGTAAGTTAAATAATAGTCCTAATGTTTGTGAATAATCTATTTCTTTATTAGAGCATTAATATATTGTCTTGTTTTTTCTCTATATAAATAACTGGCTTGGCATGCAGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAG
GATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTgtacgagttggaaa
atgaaaacataagtttgtgcattgctgttttctttgtgtacctgttattttggaattagtcgcaataatgcactaatagattactagttatgcattttcagATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAACTCTTGTGAGAAGTTATTTACCT
AACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGACTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATAAATCCCCAGCTTTTTCATTTGAC
ACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGC
Intron 3 GTGCATGTTA ... TTGTTACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.43 | 22 | 4 | 8 |
| A2 | 14.29 | 15 | 2 | 3 |
| A3 | 34.69 | 16 | 9 | 8 |
| A4 | 14.29 | 15 | 1 | 4 |
| A5 | 7.14 | 13 | 2 | 0 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 0 | 3 | 0 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 33.33 | 1 | 1 | 0 |
| A10 | 0 | 1 | 0 | 0 |
>TRINITY_DN112046_c0_g2_i3 from sample A3 / Example spliced isoformAGTCGGGCAGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAAATTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGACCTCACTTGCAGGTCGGCCACTACCG
TGGCTCCCCCCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTCTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACAC
CATGATAACGATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAG
GCTATGTGTCATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAA
ATGGGGATATTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATT
CCGAATTTGACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTAT
TTTGTCAAATCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAA
AGTACACATTGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGA
GTAAAACATTGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAA
CGACGTTCCCAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTT
ATTTGCTTTTTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGA
GTGATGTACATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATAT
GTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATAT
GCGGTATTAAAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGG
GACTGTCATATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTT
>TRINITY_DN112046_c0_g2_i1 from sample A3 / Example unspliced isoform:AGTCGGGCAGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAAATTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGACCTCACTTGCAGGTCGGCCACTACCG
TGGCTCCCCCCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTCTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACAC
CATGATAACGATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAG
GCTATGTGTCATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAA
ATGGGGATATTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATT
CCGAATTTGACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTAT
TTTGTCAAATCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAA
AGTACACATTGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGA
GTAAAACATTGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAA
CGACGTTCCCAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTT
ATTTGCTTTTTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGA
GTGATGTACATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATAT
GTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATAT
GCGGTATTAAAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGgtgcatgttatacaaggctatccttgcttaatttgaattgacaactgacaagcatgatggtgatgta
aatatgaaaagttttctcattaaaattattctacttgttaccagCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTT
Intron 4 GTTCTCCAGA ... TTTCTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.82 | 2 | 8 | 10 |
| A2 | 57.14 | 6 | 11 | 5 |
| A3 | 53.25 | 18 | 22 | 19 |
| A4 | 62.79 | 8 | 8 | 19 |
| A5 | 100 | 0 | 1 | 2 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 71.43 | 1 | 2 | 3 |
| A8 | 50 | 1 | 1 | 1 |
| A9 | 55.56 | 2 | 3 | 2 |
| A10 | 100 | 0 | 0 | 3 |
>TRINITY_DN117629_c0_g2_i3 from sample A2 / Example spliced isoformGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAATTTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGATCTCACTTGCAGGTCGGCCACTACCGTGGCTCCCC
CCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTTTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACACCATGATAAC
GATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAGGCTATGTGT
CATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAAATGGGGATA
TTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTG
ACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAA
TCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACAT
TGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACAT
TGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCC
CAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTT
TTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGAGTGATGCAC
ATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAG
TGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTA
AAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCAT
ATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATT
TGTTGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGAAATACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAA
AGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAACACAGGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCA
ATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGCTCCAATCAGAGGTAAGGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGT
TATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAAT
CCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATG
ATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTC
CAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCA
GACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCA
GATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATC
AAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTTCAGATGTAGTTCCTCGGAAAAATATGGTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTC
GGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAAGGTTCAGGCAAAAGATCTGATTCTAACGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAAT
GTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAAAACCATCGAGAAAAACCCACCAGGAGATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATT
GAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAGTGGAGAAGAAACCTGCCAATCGACCAGAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTC
AAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGATAAAAGATTTTATGTGGGAGTTGTGGAATCATATGATCCTGAATATAGAAGACACAAAGTGATTTATCATGATGGAGACATGGAAGTTCTAAGACTTGGGAGGGAGCAGTGGGAACTGATTGATGGTAAACCT
ATGTCTAAGAAGGCGATGAGGACATCAGTCAAAAGTGCTACATCTAATGGAGAGACTTCATTATATAAAACCAGAAGCAAAACTGGACTTCGAAATGTGAATTCCAATGCTCATGGTTTATTGAAACAAAGATCCAATGCTTGCTTATCTGAAAGTGAAAAGCACTCAGGAGAAAGGACTGCAGGCTCTCTTGTGTTTAC
AGATGCAAATGCAAATATTTGTTCCAAAGGGCATCGACAAGAAAATCAAGGTTCAGAAGGCAGAAAGGTTAGGAGGAAAACTCCTATGACCAAGCCAATAAGGAGGGTTTTGCGGAGTGTCAAAGAAACTAAAGAAAAAAGCAATAGATGTGCTTACAAAAGGCGGGGTGGACTAGCTGTGGCATGAGGTACTTGAGTGC
CAAGCCTCTGTTAAGTGAAATATAGATTGACAATTTGCTCCTTTCTCTGGGCATCTCTCTGAAAATGGTTCCACAATGTCACGTCTGGCTAAGATTTAAGGGGATTTAATGAATGCATAAGTGAAGTGAGCTAACTGTTTCAACATCCAAGCTTATATGTAGATCAGTGATGATCTCTTTTTTCTTGTGAGCAATGATTG
CTTACTTTGAACAGAATTATGATCTTTATCCCAATTCCAACTCTTGTACCAGAGCTACCCG
>TRINITY_DN117629_c0_g2_i8 from sample A2 / Example unspliced isoform:GCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAATTTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGATCTCACTTGCAGGTCGGCCACTACCGTGGCTCCCC
CCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTTTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACACCATGATAAC
GATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAGGCTATGTGT
CATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAAATGGGGATA
TTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTG
ACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAA
TCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACAT
TGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACAT
TGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCC
CAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTT
TTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGAGTGATGCAC
ATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAG
TGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTA
AAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCAT
ATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATT
TGTTGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGgttctccagaaattgttcttagttatttgatacactccctggcacaccatcctgattttcctgtttctaataaaagtttattcgcagaagcatttgagccattttatcggcagttgcatttttttctttcag
AAATACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAAAGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAAC
ACAGGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCAATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGC
TCCAATCAGAGGTAAGGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGTTATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGG
GAGATTTGGCCTCGCAAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAATCCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCA
GACAAGAATGTTCCCGAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATGATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAA
TGATGGTCAGAGTTTTGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTCCAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGC
CTTCAGAACAGCATGACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCAGACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAA
GAGCAATCACAAAGTACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCAGATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCG
ACCTAAGAGAGGGTATTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATCAAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTT
CAGATGTAGTTCCTCGGAAAAATATGGTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTCGGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAA
GGTTCAGGCAAAAGATCTGATTCTAACGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAATGTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAA
AACCATCGAGAAAAACCCACCAGGAGATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATTGAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAG
TGGAGAAGAAACCTGCCAATCGACCAGAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTCAAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGAT
AAAAGATTTTATGTGGGAGTTGTGGAATCATATGATCCTGAATATAGAAGACACAAAGTGATTTATCATGATGGAGACATGGAAGTTCTAAGACTTGGGAGGGAGCAGTGGGAACTGATTGATGGTAAACCTATGTCTAAGAAGGCGATGAGGACATCAGTCAAAAGTGCTACATCTAATGGAGAGACTTCATTATATAA
AACCAGAAGCAAAACTGGACTTCGAAATGTGAATTCCAATGCTCATGGTTTATTGAAACAAAGATCCAATGCTTGCTTATCTGAAAGTGAAAAGCACTCAGGAGAAAGGACTGCAGGCTCTCTTGTGTTTACAGATGCAAATGCAAATATTTGTTCCAAAGGGCATCGACAAGAAAATCAAGGTTCAGAAGGCAGAAAGG
TTAGGAGGAAAACTCCTATGACCAAGCCAATAAGGAGGGTTTTGCGGAGTGTCAAAGAAACTAAAGAAAAAAGCAATAGATGTGCTTACAAAAGGCGGGGTGGACTAGCTGTGGCATGAGGTACTTGAGTGCCAAGCCTCTGTTAAGTGAAATATAGATTGACAATTTGCTCCTTTCTCTGGGCATCTCTCTGAAAATGG
TTCCACAATGTCACGTCTGGCTAAGATTTAAGGGGATTTAATGAATGCATAAGTGAAGTGAGCTAACTGTTTCAACATCCAAGCTTATATGTAGATCAGTGATGATCTCTTTTTTCTTGTGAGCAATGATTGCTTACTTTGAACAGAATTATGATCTTTATCCCAATTCCAACTCTTGTACCAGAGCTACCCG
Intron 5 GTATTAGCCA ... ATTGTGTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.73 | 17 | 6 | 4 |
| A2 | 22.81 | 22 | 5 | 8 |
| A3 | 41.67 | 14 | 11 | 9 |
| A4 | 24.14 | 11 | 1 | 6 |
| A5 | 9.09 | 10 | 2 | 0 |
| A6 | 0 | 2 | 0 | 0 |
| A7 | 11.11 | 28 | 1 | 6 |
| A8 | 27.54 | 25 | 8 | 11 |
| A9 | 20.93 | 17 | 5 | 4 |
| A10 | 9.09 | 20 | 2 | 2 |
>TRINITY_DN117629_c0_g2_i3 from sample A2 / Example spliced isoformGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAATTTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGATCTCACTTGCAGGTCGGCCACTACCGTGGCTCCCC
CCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTTTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACACCATGATAAC
GATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAGGCTATGTGT
CATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAAATGGGGATA
TTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTG
ACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAA
TCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACAT
TGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACAT
TGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCC
CAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTT
TTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGAGTGATGCAC
ATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAG
TGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTA
AAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCAT
ATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATT
TGTTGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGAAATACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAA
AGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAACACAGGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCA
ATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGCTCCAATCAGAGGTAAGGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGT
TATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAAT
CCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATG
ATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTC
CAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCA
GACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCA
GATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATC
AAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTTCAGATGTAGTTCCTCGGAAAAATATGGTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTC
GGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAAGGTTCAGGCAAAAGATCTGATTCTAACGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAAT
GTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAAAACCATCGAGAAAAACCCACCAGGAGATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATT
GAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAGTGGAGAAGAAACCTGCCAATCGACCAGAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTC
AAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGATAAAAGATTTTATGTGGGAGTTGTGGAATCATATGATCCTGAATATAGAAGACACAAAGTGATTTATCATGATGGAGACATGGAAGTTCTAAGACTTGGGAGGGAGCAGTGGGAACTGATTGATGGTAAACCT
ATGTCTAAGAAGGCGATGAGGACATCAGTCAAAAGTGCTACATCTAATGGAGAGACTTCATTATATAAAACCAGAAGCAAAACTGGACTTCGAAATGTGAATTCCAATGCTCATGGTTTATTGAAACAAAGATCCAATGCTTGCTTATCTGAAAGTGAAAAGCACTCAGGAGAAAGGACTGCAGGCTCTCTTGTGTTTAC
AGATGCAAATGCAAATATTTGTTCCAAAGGGCATCGACAAGAAAATCAAGGTTCAGAAGGCAGAAAGGTTAGGAGGAAAACTCCTATGACCAAGCCAATAAGGAGGGTTTTGCGGAGTGTCAAAGAAACTAAAGAAAAAAGCAATAGATGTGCTTACAAAAGGCGGGGTGGACTAGCTGTGGCATGAGGTACTTGAGTGC
CAAGCCTCTGTTAAGTGAAATATAGATTGACAATTTGCTCCTTTCTCTGGGCATCTCTCTGAAAATGGTTCCACAATGTCACGTCTGGCTAAGATTTAAGGGGATTTAATGAATGCATAAGTGAAGTGAGCTAACTGTTTCAACATCCAAGCTTATATGTAGATCAGTGATGATCTCTTTTTTCTTGTGAGCAATGATTG
CTTACTTTGAACAGAATTATGATCTTTATCCCAATTCCAACTCTTGTACCAGAGCTACCCG
>TRINITY_DN117629_c0_g2_i7 from sample A2 / Example unspliced isoform:GGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGTTATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGC
AAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAATCCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCC
GAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATGATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTT
TGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTCCAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATG
ACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCAGACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGT
ACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCAGATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTA
TTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATCAAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTTCAGATGTAGTTCCTC
GGAAAAATATGGTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTCGGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAAGGTTCAGGCAAAAGA
TCTGATTCTAACGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAATGTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAAAACCATCGAGAAAAA
CCCACCAGGAGATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATTGAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAGTGGAGAAGAAACCTG
CCAATCGACCAGAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTCAAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGATAAAAGATTTTATGTG
GGAGTTGTGGAATCATATGATCCTGAATATAGAAGACACAAAgtattagccaacaacttctgcggcattaaactttctactatgaaataaggttgttttattatgtttggcatgtctgatctaaatttcattgtgttagGTGATTTATCATGATGGAGACATGGAAGTTCTAAGACTTGGGAGGGAGCAGTGGGAACTGA
TTGATGGTAAACCTATGTCTAAGAAGGCGATGAGGACATCAGTCAAAAGTGCTACATCTAATGGAGAGACTTCATTATATAAAACCAGAAGCAAAACTGGACTTCGAAATGTGAATTCCAATGCTCATGGTTTATTGAAACAAAGATCCAATGCTTGCTTATCTGAAAGTGAAAAGCACTCAGGAGAAAGGACTGCAGGC
TCTCTTGTGTTTACAGATGCAAATGCAAATATTTGTTCCAAAGGGCATCGACAAGAAAATCAAGGTTCAGAAGGCAGAAAGGTTAGGAGGAAAACTCCTATGACCAAGCCAATAAGGAGGGTTTTGCGGAGTGTCAAAGAAACTAAAGAAAAAAGCAATAGATGTGCTTACAAAAGGCGGGGTGGACTAGCTGTGGCATG
AGGTACTTGAGTGCCAAGCCTCTGTTAAGTGAAATATAGATTGACAATTTGCTCCTTTCTCTGGGCATCTCTCTGAAAATGGTTCCACAATGTCACGTCTGGCTAAGATTTAAGGGGATTTAATGAATGCATAAGTGAAGTGAGCTAACTGTTTCAACATCCAAGCTTATATGTAGATCAGTGATGATCTCTTTTTTCTT
GTGAGCAATGATTGCTTACTTTGAACAGAATTATGATCTTTATCCCAATTCCAACTCTTGTACCAGAGCTACCCG
Intron 6 GTAAAAATGA ... ATTGAAGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.51 | 25 | 17 | 6 |
| A2 | 40 | 6 | 5 | 3 |
| A3 | 33.33 | 13 | 4 | 9 |
| A4 | 50 | 4 | 2 | 6 |
| A5 | 55.56 | 4 | 1 | 9 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | -1 | 0 | 0 | 0 |
| A8 | 100 | 0 | 1 | 3 |
| A9 | 25 | 6 | 3 | 1 |
| A10 | 27.27 | 4 | 1 | 2 |
>TRINITY_DN117629_c0_g2_i3 from sample A2 / Example spliced isoformGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAATTTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTACGATGACGAAGCCAGATCTCACTTGCAGGTCGGCCACTACCGTGGCTCCCC
CCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTTTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAACACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACACCATGATAAC
GATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTTGGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAGGCTATGTGT
CATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGAGCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAAATGGGGATA
TTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTG
ACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAA
TCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACAT
TGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACAT
TGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCC
CAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTT
TTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTACATTAAAGAGGGAGTGATGCAC
ATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAG
TGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTA
AAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGGCTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCAT
ATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAAATATGCATGTGCTTTTGTACTTAGCACAGCTGGAGAAACTGAGCATGCTCTTTTAGAGGCTAGACAATACCTGGTTGAATT
TGTTGAGACATGTCGAGATACCCAGTTGCATCAATCCTCCTTGCAATTAGATTGCAACTCATCTACAGAAATACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAA
AGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAACACAGGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCA
ATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGCTCCAATCAGAGGTAAGGGACTGGATGCTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGT
TATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGACAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAAT
CCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGAGAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATG
ATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAAAGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTC
CAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGACAAGCAATCGAAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCA
GACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTACAATAAAAGCAGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCA
GATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATTTAAAATTCTCGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATC
AAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTTCAGATGTAGTTCCTCGGAAAAATATGGTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTC
GGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAAGGTTCAGGCAAAAGATCTGATTCTAACGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAAT
GTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAAAACCATCGAGAAAAACCCACCAGGAGATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATT
GAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAGTGGAGAAGAAACCTGCCAATCGACCAGAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTC
AAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGATAAAAGATTTTATGTGGGAGTTGTGGAATCATATGATCCTGAATATAGAAGACACAAAGTGATTTATCATGATGGAGACATGGAAGTTCTAAGACTTGGGAGGGAGCAGTGGGAACTGATTGATGGTAAACCT
ATGTCTAAGAAGGCGATGAGGACATCAGTCAAAAGTGCTACATCTAATGGAGAGACTTCATTATATAAAACCAGAAGCAAAACTGGACTTCGAAATGTGAATTCCAATGCTCATGGTTTATTGAAACAAAGATCCAATGCTTGCTTATCTGAAAGTGAAAAGCACTCAGGAGAAAGGACTGCAGGCTCTCTTGTGTTTAC
AGATGCAAATGCAAATATTTGTTCCAAAGGGCATCGACAAGAAAATCAAGGTTCAGAAGGCAGAAAGGTTAGGAGGAAAACTCCTATGACCAAGCCAATAAGGAGGGTTTTGCGGAGTGTCAAAGAAACTAAAGAAAAAAGCAATAGATGTGCTTACAAAAGGCGGGGTGGACTAGCTGTGGCATGAGGTACTTGAGTGC
CAAGCCTCTGTTAAGTGAAATATAGATTGACAATTTGCTCCTTTCTCTGGGCATCTCTCTGAAAATGGTTCCACAATGTCACGTCTGGCTAAGATTTAAGGGGATTTAATGAATGCATAAGTGAAGTGAGCTAACTGTTTCAACATCCAAGCTTATATGTAGATCAGTGATGATCTCTTTTTTCTTGTGAGCAATGATTG
CTTACTTTGAACAGAATTATGATCTTTATCCCAATTCCAACTCTTGTACCAGAGCTACCCG
>TRINITY_DN117629_c0_g2_i10 from sample A2 / Example unspliced isoform:AAATACTGCATGAAGATCCAAGTAAAACCCATGATTCAGAAAATACAAATAAACTCGATAATATTCCATTGATCCTGACAGTGTTTCGGACCATCAAGCAAATGGAAGATGCAGTTGACAAATCTAAGTCAAAGAACCTCTATGCCTTGTGTGATCTTGGTCTTTGGATCATAAAGGACTTTGCTCACAGTCAGATCAAC
ACAGGGAGTGAAGGAATATCAGTATCACTCCCACGATTGTACTGCAGGACTCAAGATGCCCATTTAAAGGAAGATGGGAGCCATTTACCTCCTTGTCTTGGGGATGATCTGTTGAGACGATTCAAAGCTGCAATTTTCCTCTCAAGTGATCAGTTGACTCCGGATCAGAAGTTGTGCAAGAGCAGTGCATATGAGAATGC
TCCAATCAGAGgtaaaaatgatgttaacaaataacatttttcaaagaggagcaataataaatcaaatgaaaattcgaagtaaagcatatatagaagcccaaaaactccagaaattgtcatagaacagctagattgtggtttggatgcatctaataaatcactggtttttggcataattgaagaagGTAAGGGACTGGATG
CTGAGAGTTTGGAGTCTGGAAATCCTTTAGAGCATTTTGAAGAACAATTCAAAAGAACAATATTAGAAGTGGTGCCTAGTGAAGTCAAGTCTGCTGAGGATAATGTTATGAATAATTTTGCAAAAACAGCAGTTCTTTCCAAAAGGAAACGAGGCCGACCGAGTAAGAGAATGGGAGATTTGGCCTCGCAAGGAAATGGA
CAGGGCTCATCAGGTAAGGATTCTAATCACATGAAGTTGTCTCAACCACAGCGAGGGCATAAAAAATTTCTGGGTTGCAAACAAGCTGTTCAAAGCGAGAGAGAATCCACAGATTTAAAATTGGCATCTGGAACTCAGGAGAATCCTGATGAAAAGTTATCTAATAGGAGTCCAGACAAGAATGTTCCCGAAGATGGTGA
GAGTTTGGAGTCTGAAAAAGCTTCAGAACAGCATGAGGAGCAATCAAAAAGAATAATAGTAGAAGTGGCGCTCAATAAAGTCAAGTCTGCTGCAGATAATGTTATGATGACTGTTGCAGAAGCATCGGTCCTTCCCAAAACGAAACAAGGTGGACCATGCGAGAATGGTCCCAATGATGGTCAGAGTTTTGAGTTTGAAA
AGCCTTCAGAAAAGCATGGGAAGCAATCAAGTCCGCTGGTTCCCATTGGGGTCAAGTCCGCTGCAGATAATCTTATGATGACGATTGCAAAAGCATTGGTCCTTTCCAGAAGCAAACGAGGCAGACCATACAAGGATGGTCCCAAAGACGGTGAGAATTTGGAGTTTGAAAAGCCTTCAGAACAGCATGACAAGCAATCG
AAAAGCAGAACAAAAGAAGTGATCCCCAGCGAAGTCAAGTCTGCTGCAGATAATGATATGATGACAGTTACAGAAGTATCTGTCTTTCCCAAAAGGAAGCGAGGCAGACCGTTCAAGAAAGGTCCCAAAGATCATGAAAGTTTGGAGTTCGAAAATCCTTCAGAACAGCATGAAGAGCAATCACAAAGTACAATAAAAGC
AGTTCTCAATGAAGTTAAGTCTGCTGCAGATAATATTATGATCTCAGTTGCAGAAGCATCAGTCCTTCCCAAAAGGAAACGAGGAAGACCCACTAAGGGGTCAGCAGATTTGGCCTCCCAGGGAAATAGGCAAAGCTTATCAGGCAAGGATACTAATAAGTTGAATTTGTCTCGACCTAAGAGAGGGTATTTAAAATTCT
CGGGATGCAAATCTGAGAGAATATTGAGAAGTCTCTCTAGAGCACCTGGGATGCGCCATAATGATCAACTGATCCAAAGAAGTAAATTTTCCAGACAGAAACAATCAAAGTGTTCAAGGAAGTTGGATATGGAAGCAACATACAGGGTTGAACGAGAAAGAAAGAGGAAAACTTCAGATGTAGTTCCTCGGAAAAATATG
GTTGGTGAGGTTAATTTTACCTCTGCCGATATAGAAGCATTGGCCTTGTCTAAGAGGAAAAAGAGGTGTGTCCGCAAGGAATCACCAGAGTTTCCTTCTCCAGGTCGGCAGCAATGCCTGTTAGAGAAGTCTGAAGGCTTAAAGTTATCTCAATGCAGGGGAGGCTGTCCAAAAGGTTCAGGCAAAAGATCTGATTCTAA
CGAAAAACTTAAGTTGCCAGATTTGACAAGGGCTATTGAGAGAGTGCCAGTTGGGTCCTCAGGAGCTAAATTAACTCCTTACTGTCAACCATTAGAAGAAGATAATGTTTCTGGACAAAAAGTACCAAAGAGTTCCAATAATAGGTTAGGTGACAATCATGATAAACTTGAAAAAACCATCGAGAAAAACCCACCAGGAG
ATCAAAAGCCTTCTACAGAAATTGAAACTCTGGATCTGAAGTCAGAGATTGTGTGTTTGCATGAAAAGAAACCTGCCAATCCACCAGAGTTTCCAGAGAAGGTATTGAATGAAGATGGAAACAACCCCAAAGGGACTCCAAGAAAGCTTTTAAGGAGCAAAAGATTCTCTGGAGTGGAGAAGAAACCTGCCAATCGACCA
GAGTCTCCAGAGAAAGGATTGAATGAAGATGGGAATAACCACAGTGGGACTCCAGGAAGGCTTTTAAGGAGCAAAAGCTTCTCTGGACTGGAGAAAAGTGCTTCTCAAAAACTTGATAAGGAAATTGGAGAGGAGTTGGTTGGGCATAGGATAAAGGTTTGGTGGCCACTAGATAAAAGATTTTATGTGGGAGTTGTGGA
ATCATATGATCCTGAATATAGAAGACACAAAGT
Intron 7 GTGCAATTCT ... TTGTGGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 36.36 | 7 | 3 | 5 |
| A2 | 20 | 22 | 7 | 4 |
| A3 | 33.33 | 10 | 3 | 7 |
| A4 | 31.71 | 14 | 5 | 8 |
| A5 | 33.33 | 1 | 0 | 1 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 0 | 1 | 0 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | -1 | 0 | 0 | 0 |
| A10 | 0 | 3 | 0 | 0 |
>TRINITY_DN122354_c6_g1_i8 from sample A1 / Example spliced isoformTTTGAAGAAAGCAATCATGGGTATATTAATATCATGTTCTTATGAATCTTTCTTAGATTCTGTGATTTGTCAATTTTGTTCCAGGATATTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATC
TAAAAATGATCCGTACAATTATCACGAGATCATCTTTAACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTGACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTC
TCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTGGAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAATCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAAT
TATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGAAGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACATTGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGA
CAAGAATTTCAGATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACATTGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGG
AAAAAATCAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCCCAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACT
ATTGATTACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTTTTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGT
TTTCCCTTCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTGCATTAAAGAGGGAGTGATGCACATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATG
CAGTGCAAGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTT
CTTCGGAAAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGA
AGTGCAGTCAAGCAAGGTTGATAAATCTCATATAAGACTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTC
ACAGTAAATATGCATGTGCTTTTGTACTTAGC
>TRINITY_DN122354_c6_g1_i1 from sample A1 / Example unspliced isoform:CATATATTTATAAGAAAGCGGAATACCTCACACACGGGTTTTGTCGGGCAGCTACCTGTTGTTGCTCCAATTTACTGGATTTGCGCTGGTTAAAAGTATTGCACGCTAAGGGTCGGCTGCTAATTTTTTTGATTCAGCTGTGTCGGCATTCAAAGTTCGAATCCCGTTAAGGCATTCAAAGTTCGAATACGTTAAGGTAC
GATGACGAAGCCAGATCTCACTTGCAGGTCGGCCACTACCGTGGCTCCCCCCCTCGTAAAGAAATTGTTCGAAATTGGCAAGAAGTTGAAGAAACCTCGTTTTTCCAAAGAATATTTACTCGAGATCTTGGAGCAAGCTGTGATGTATTTGGCTGAGGTTAATCAGTCACCTTCTGATCCGATATTAACATCATTAACAA
CACCAATGCATGCATTAGTTATGCCAAAGATTTTGAGACACCATGATAACGATGTAAGGATTTTGGTGGCTACCTGCATCAGTGAAATCATGAGGATAACAGCACCAGCAGCTCTATACAGTGATGATATTCTAAAGGAAATATTTGAGCTGATTGTTGCAACATTTCGTGGATTAGACGAGATTCACAGTCCTTCATTT
GGAAGAAGGGTCATAATTCTAGAAACTGTTGCAAAAGTTAGGCTATGTGTCATTATGTTGGATCTTCAATGTGATGACCTGATTTTGGAAATGTTTTATGTCTTCTTTTCCAAGGCCAGAGAAGATCATCCAGAAAATGTCTTAACATCAATGCAAACAATCCTGACTGAGGTTCTCAATGAAAGTGAAGTCATTTCGGA
GCAACTATCATCAATCTTATTAAACAGATTAAGAAGAGAAAATGGGGATATTTCTCCAGCTGCCTATAGACTAGCTATGAATGTTATGAAGTGTGTGGCAGTCAAGCTTGAGCCAAATGTGAATCTCTTCCTCACATCACTAATGTCAGCTGAAAGAAAATCTAAAAATGATCCGTACAATTATCACGAGATCATCTTTA
ACATTTATCAGTGTGCACCCAAGATATTGCGGTCCATCATTCCGAATTTGACTCAAGAGCTTCTGTCGGAGTTATCAGATGTGCGGCTAAGTTCAGTAAAGCTTCTTGGGCGTATCTTTGCAACTCCAGGTTATGATCTTGAAAAAGAGTTTCAACCACTTCTCTCAGAATTTTTAAAGAGATTTGCAGACAATTCTGTG
GAAGTTCGATTGGCAGCTGTGAAATATGCTAAAGAATGTATTTTGTCAAATCCATTTAGGCCTGAATCATCTGGGATAATTGCTGCTCTTCGTGATCGATTGTTGGATTCTAATGAGGACGTTCGGAAGCAAGTTATTGGAGCAATTTGTGATGTAGTAAATTATGCCCCAAACTCCATTCCGATCGAGGCTATCAGAGA
AGTAGCAGATTGCCTTCATGACAAAATGGTTTCAGTACAAAAGTACACATTGGAAAGACTTGTAGGTGTGTACAGAGTTTATTGTTCAAAAAGTTTGGATGGCTCAGTTGGTAACTTTGAGTTTGTTTGGATTCCTGGGAAAATTCTAGGATGTTGTTATGACAAGAATTTCAGgtgcaattctttagaaattatggaat
ctaaaatataatttatactctttgcgagatatgtgaactagtctctgtatttacgacttgttcatgctatttaagtggatgtcatcagcatagaagtcgataatttctatttttattgtccgagcagccaaatttctttttggatgcatgacaacagttatttgcaacaaaaggtcaatcatttaatttggttgattgtg
ggcagATCTCAAGTAGTGGAAGAGGCTTTTTCTCAATCACTTTTCCCTTCCGACCTTCCACTTCCAGAAAGAGTAAAACATTGGATTGCAATGTTTTCTGCATTTGAAAAACCAGAGATTAAGGCTTTTGAGGAAGTTTTGAATCAAAAGAAAAGGTTACAAGTACACATGCAGAACTTCCTATTATGGCAGGAAAAAAT
CAAGGAAGAAGATACACCTGAGCTGAAAAATAAGATTCTTAGTTGCACCAAAATTATGTCAAGGTCCTTCAACGACGTTCCCAAAGGAGAGGAAAGCTTTATAAAATTAAGCCAAATAAAAGACAACAATATTTGGAAGGCATTATCCAGCTTACTTGATTCCAGATTGACTTTTGTTCAAACACAATTAACTATTGATT
ACTTGCTTAAGCAACTTGGTGGTGGACATCCTCAATATGAGTTTATGAAGACACTTGCCATGAGGTGTTCTTATTTGCTTTTTGGCAAAGAACATGTGAAAGAAATGCTTAAAGAGATTGCAGTGAATACACTATCAGGGAAAGACAAAATTGTTGTGTCAAGCATGAACCTACTTGTGCTTTTTGCTAGGGTTTTCCCT
TCATTGTTTGATGGAGTAGTAGAAGATATGCTTCAGCTGCTTAAGGACGATAATGATTGCATTAAAGAGGGAGTGATGCACATTTTGGCCAAAACTGGTACTATCCATGAAGATATGATTGAGAATAGTGGCCCCATAGATCTTCTGCTTGAAAAGTTATGCTTAGAAGGTAGTCGAAAGCAGGCCAAGTATGCAGTGCA
AGCTATTGTTTCAATAAAAAAGGATTTTGGATCCAGGACACTTTCTGCATTGTACAAGAGACTTGTCGATATGTTGGAAAGTGATGAACATCTGGCAACAGTGCTGCAATCCTTAGGTTGCATTGCTCAAACTGCAATGCCAGTTTTTGAGACTCGGGAGAATGAGATTATTCAGTTTATTTGTCGTAAACTTCTTCGGA
AAAGCAGTATTCCCGTTGACATTTCCAAGACAGGATGGCATGACAGAAGTAAAGAGTGTTTTTTGAAGATATGCGGTATTAAAACTCTTGTGAGAAGTTATTTACCTAACAGTAATGCTCATTTAAGACAAAGGATAAAAGCTTTGTTTGGGGTGCTTACAAAACTTATTACTACAGGCGAAATATCAGAGGAAGTGCAG
TCAAGCAAGGTTGATAAATCTCATATAAGACTTGCTGCTGCCAAGGCAGTTTTGCGGCTTTCTAGGCAGTGGGACTGTCATATAAATCCCCAGCTTTTTCATTTGACACTGCGAACTGCACAGGACATTTGTCCTCATGTGAGGAAACAATTTCTTGCTAAGGTTCATAGGTACCTGAAGGATAGGAATCTTCACAGTAA
ATATGCATGTGCTTTTGTACTTAGC