sp|Q10AZ7|GPA3_ORYSJ ----> Protein GLUTELIN PRECURSOR ACCUMULATION 3
Intron 1 GTAGGAGAAT ... ATCCTTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.43 | 8 | 4 | 3 |
| A2 | 33.33 | 1 | 0 | 1 |
| A3 | 30.77 | 9 | 3 | 5 |
| A4 | 18.75 | 13 | 5 | 1 |
| A5 | 33.33 | 2 | 1 | 1 |
| A6 | 14.29 | 6 | 0 | 2 |
| A7 | 31.25 | 11 | 3 | 7 |
| A8 | 15.38 | 11 | 0 | 4 |
| A9 | 35.71 | 18 | 8 | 12 |
| A10 | 22.22 | 7 | 1 | 3 |
>TRINITY_DN41212_c0_g1_i2 from sample A7 / Example spliced isoformTTGAATTTTACGCCTTATACAACTAAACATATATATGTAGAATACATATATATAGATTGTTATCATGGTCATTAGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTT
CAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGTTAGGGAAGAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATGGCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACGCATGCAATACTCT
CAGAAATGGCCGCTCTTTCTATGTTTTCGGAGGCTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATGTTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGCCACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGA
ATCCTCTTAGAGACCTGGTCATACTTGATACAGCTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGGACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGGGAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACT
AACATGACCTGGACAAGAGCTGTGACAAGTGGTAAACCACCATCTGCACGTGATAGCCATACCTGTTCATCATGGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCCTTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACC
ACGAGCAGGCCATTCTACAGTCTCTTTGGGAAAATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTCTTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTGGGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTC
TTGTATTCATTGGAGGTTGCAATGAGAAACTAGAGGCACTTGATGAGTTGTACTATCTACACACTG
>TRINITY_DN41212_c0_g1_i6 from sample A7 / Example unspliced isoform:TTGAATTTTACGCCTTATACAACTAAACATATATATGTAGAATACATATATATAGATTGTTATCATGGTCATTAGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTT
CAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGgtaggagaataaagttttctgtctcataggtctcatcattcgttcattaaaatttaaggtagaggcaggtttctgtgatttgttgcagactttcagagtatgtttggggatttttttgcttgtaatgagacaata
aatatctggcttcttaatttgaatcctttgagTTAGGGAAGAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATGGCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACGCATGCAATACTCTCAGAAATGGCCGCTCTTTCTATGTTTTCGGAGG
CTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATGTTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGCCACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGAATCCTCTTAGAGACCTGGTCATACTTGATACAG
CTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGGACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGGGAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACTAACATGACCTGGACAAGAGCTGTGACAAGTGGT
AAACCACCATCTGCACGTGATAGCCATACCTGTTCATCATGGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCCTTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACCACGAGCAGGCCATTCTACAGTCTCTTTGGGAAA
ATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTCTTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTGGGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTCTTGTATTCATTGGAGGTTGCAATGAGAAACTAG
AGGCACTTGATGAGTTGTACTATCTACACACTG
Intron 2 GTAGGAGAAT ... AAAATTTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.19 | 7.2 | 2 | 0.6 |
| A2 | 82.86 | 0.6 | 2 | 2.6 |
| A3 | 53.14 | 7 | 7 | 8 |
| A4 | 23.15 | 12.6 | 6 | 1.6 |
| A5 | 33.33 | 1.6 | 1 | 0.6 |
| A6 | 28.33 | 4.4 | 0 | 3.2 |
| A7 | 46.02 | 8 | 5 | 7.4 |
| A8 | 18.57 | 9 | 1 | 3.4 |
| A9 | 42 | 15.2 | 8 | 13.6 |
| A10 | 21.33 | 5 | 1 | 1.8 |
>TRINITY_DN100282_c0_g1_i4 from sample A3 / Example spliced isoformAGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTTCAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGTTAGGGAA
GAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATGGCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACACATGCAATACTCTCAGAAATGGCCGCTCTTTCTATGTTTTCGGAGGCTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATG
TTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGCCACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGAATCCTCTTAGAGACCTGGTCATACTTGATACAGCTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGG
ACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGGGAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACTAACATGACCTGGACAAGAGCTGTGACAAGTGGTAAACCACCATCTGCACGTGATAGCCATACCTGTTCATCAT
GGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCCTTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACCACGAGCAGGCCATTCTACAGTCTCTTTGGGAAAATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTC
TTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTGGGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTCTTGTATTCATTGGAGGTTGCAATGAGAAACTAGAGGCACTTGATGAGTTGTACTATCTACACACTGAGATGGT
ACTGGAAAATGAGCAAGAGGAACAAAAGCCAGAAAAGTTATCTTTAAGAAAGGAGTTGAAAAGAAAGCGCCAAGAGCATACTATTTTGTCTAATAATACTGTAAGAGAGAGAGACATGCCCAAGTTTGATGGGATTAATACACCAGCTTTGCCAACAGTTCCGCCTGGGCATACCTCTGCTGGTAACTACCTTTATTTAA
TTTTCTCATGTGACACTCTTGTGATCTAATATCATCTCCGGGGTGAACTCCTCATCATTTCTGCATTTTAG
>TRINITY_DN100282_c0_g1_i2 from sample A3 / Example unspliced isoform:AGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTTCAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGgtaggaga
ataaagttttctgtctcataggtctcatcattcgttcattaaaatttaagTTAGGGAAGAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATGGCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACACATGCAATACTCTCAGAAATGGCCGCTC
TTTCTATGTTTTCGGAGGCTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATGTTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGCCACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGAATCCTCTTAGAGACC
TGGTCATACTTGATACAGCTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGGACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGGGAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACTAACATGACCTGGACA
AGAGCTGTGACAAGTGGTAAACCACCATCTGCACGTGATAGCCATACCTGTTCATCATGGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCCTTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACCACGAGCAGGCCATTC
TACAGTCTCTTTGGGAAAATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTCTTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTGGGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTCTTGTATTCATTGGAG
GTTGCAATGAGAAACTAGAGGCACTTGATGAGTTGTACTATCTACACACTGAGATGGTACTGGAAAATGAGCAAGAGGAACAAAAGCCAGAAAAGTTATCTTTAAGAAAGGAGTTGAAAAGAAAGCGCCAAGAGCATACTATTTTGTCTAATAATACTGTAAGAGAGAGAGACATGCCCAAGTTTGATGGGATTAATACA
CCAGCTTTGCCAACAGTTCCGCCTGGGCATACCTCTGCTGGTAACTACCTTTATTTAATTTTCTCATGTGACACTCTTGTGATCTAATATCATCTCCGGGGTGAACTCCTCATCATTTCTGCATTTTAG
Intron 3 GTAGAGGCAG ... ATCCTTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75 | 1 | 3 | 3 |
| A2 | 50 | 3 | 5 | 1 |
| A3 | 23.08 | 10 | 1 | 5 |
| A4 | 20 | 2 | 0 | 1 |
| A5 | 33.33 | 1 | 0 | 1 |
| A6 | 20 | 4 | 0 | 2 |
| A7 | 33.33 | 9 | 2 | 7 |
| A8 | 28.57 | 5 | 0 | 4 |
| A9 | 33.33 | 16 | 4 | 12 |
| A10 | 33.33 | 3 | 0 | 3 |
>TRINITY_DN41212_c0_g1_i5 from sample A7 / Example spliced isoformTTGAATTTTACGCCTTATACAACTAAACATATATATGTAGAATACATATATATAGATTGTTATCATGGTCATTAGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTT
CAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGGTAGGAGAATAAAGTTTTCTGTCTCATAGGTCTCATCATTCGTTCATTAAAATTTAAGTTAGGGAAGAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATG
GCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACGCATGCAATACTCTCAGAAATGGCCGCTCTTTCTATGTTTTCGGAGGCTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATGTTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGC
CACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGAATCCTCTTAGAGACCTGGTCATACTTGATACAGCTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGGACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGG
GAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACTAACATGACCTGGACAAGAGCTGTGACAAGTGGTAAACCACCATCTGCACGTGATAGCCATACCTGTTCATCATGGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCC
TTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACCACGAGCAGGCCATTCTACAGTCTCTTTGGGAAAATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTCTTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTG
GGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTCTTGTATTCATTGGAGGTTGCAATGAGAAACTAGAGGCACTTGATGAGTTGTACTATCTACACACTG
>TRINITY_DN41212_c0_g1_i6 from sample A7 / Example unspliced isoform:TTGAATTTTACGCCTTATACAACTAAACATATATATGTAGAATACATATATATAGATTGTTATCATGGTCATTAGCATGCATATCGAATATTCGTTAGCTTCTCCCTCGTAGTATCGCTGGGCTTATTAAGTCAGTCTGCATGTCACCCACAAATCGTGGAGCAATAAAAGACCAGATCGAATGAATAAACGCCTGTCTT
CAAACACATCATACCAATAGCCGAAAGTAACTCTGCTTCTGAAAGGAAGTAAAAACACAAGAAGGGTAGGAGAATAAAGTTTTCTGTCTCATAGGTCTCATCATTCGTTCATTAAAATTTAAGgtagaggcaggtttctgtgatttgttgcagactttcagagtatgtttggggatttttttgcttgtaatgagacaata
aatatctggcttcttaatttgaatcctttgagTTAGGGAAGAATGAGGTGGGAAAAGGTGAAGATTAAGATAAAAGGCGGAGAGGACCCAGACGCGAAGAAGTCTCATGGCAGGAAAGGTGGTGGGTTGGGTCCAGGCAAGAGATGGGGCCACGCATGCAATACTCTCAGAAATGGCCGCTCTTTCTATGTTTTCGGAGG
CTATGGGAAGGACAATTCCCAGACAAATGACGTTCACATGTTTGACCCGAACAAGCAAACGTGGACGAAGCCGAATTTGAAAGGAAATTCTCCTACTCCCAGGGATAGCCACAGTTGTACAACTGTCGGATCATGTCTATTTGTTTTTGGCGGCACCGATGGGGAGAATCCTCTTAGAGACCTGGTCATACTTGATACAG
CTACAAACTCATGGATGGAACCTGAAGTACATGGTGAAGGACCAGCAGCTCGAGAGGGGCATAGTGCTGCACTTATTGGCCATCGTCTGTTTATCTTCGGAGGATGTGGGAAAACTCAAGAAGAAGATGAGATTTATTACAATGACCTTTATATTTTGGACACAACTAACATGACCTGGACAAGAGCTGTGACAAGTGGT
AAACCACCATCTGCACGTGATAGCCATACCTGTTCATCATGGAACAACAAAATTATAGTAGTTGGTGGTGAGGATGCATTGGGTTCATATTTGTCTGATGTTCATGTCCTTGATGCAGATACTCTTGTTTGGGAACAGCTTAAAACAACTGGTCAAATCCTGACACCACGAGCAGGCCATTCTACAGTCTCTTTGGGAAA
ATATTTGTTTGTCTTTGGTGGTTTTACTGATGATCGCTTCTTATTTGATGATTTGCATATACTAAACATAGAGACTGGTGCATGGACGGAAGCAGTTACCGATGGCGTGGGCCCTTCTTCCAGATTCTCTGTTGCAGGGGATTGTTTAGATTACAAGAGAGGTGTTCTTGTATTCATTGGAGGTTGCAATGAGAAACTAG
AGGCACTTGATGAGTTGTACTATCTACACACTG