sp|F4J3H7|ZRK7_ARATH ----> Serine/threonine-protein kinase ZRK7

Intron 1 GTAATTGCAG ... CGCATTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60	10	13	17
A2	63.89	13	19	27
A3	50.59	21	20	23
A4	57.14	6	3	13
A5	61.04	15	23	24
A6	53.1	34	27	50
A7	52.94	20	19	26
A8	48.84	11	10	11
A9	43.4	15	9	14
A10	53.85	15	12	23

>TRINITY_DN41613_c0_g1_i6 from sample A6 / Example spliced isoform

CAAGTGTAGTATCTGTTCTTATCAGTTCAATATCTGATACGTGGTTCATAGAACCACATGATATTAAATGTATTTTTATAGGGGGAGGGTCCACTTACAGTAGCTTGCTACTGGGGCTCTCAGGCGTCGCTTGAGCGTTGCACTACAGCACAAGCCCGGCGCACCCCAACAACACAAAAACAAATGTAATCAGTACATCC
CGGGGACGGCAGGCTAAGGACACAGAATCAGCGCGACATACCTGAGCAACACAAGCACGAAGTGTTGAATAGTTTGTGTTGAATACCCTTAAATGAAAGATCGTTGTCTTCGATGGGTTTGGTTTGGCTGAATTTCTTCTTCTTAACGGGTTCCTCAAATGAAAGACAATGTAAGTGTTATTTGTATTTGCAGCATTTGT
ATTTCAGATCGTTGTCTTGGATGGGTTTCTTCCGTTTTCAGTTGCTGTTGTTGGTTACTGACGATACGGATGTGGTGCTCAACAAGAGAAGAGGATCAGG

>TRINITY_DN41613_c0_g1_i10 from sample A6 / Example unspliced isoform:

CAAGTGTAGTATCTGTTCTTATCAGTTCAATATCTGATACGTGGTTCATAGAACCACATGATATTAAATGTATTTTTATAGGGGGAGGGTCCACTTACAGTAGCTTGCTACTGGGGCTCTCAGGCGTCGCTTGAGCGTTGCACTACAGCACAAGCCCGGCGCACCCCAACAACACAAAAACAAATGTAATCAGTACATCC
CGGGGACGGCAGGCTAAGGACACAGAATCAGCGCGACATACCTGAGCAACACAAGCACGAAGTGTTGAATAGTTTGTGTTGAATACCCTTAAATGAAAGgtaattgcagacggtttagtttggctgaatttctctctttacgggttcctcagtgtttcagatcgttgtcttggatgggtttcatttttgcgcattgcagA
TCGTTGTCTTCGATGGGTTTGGTTTGGCTGAATTTCTTCTTCTTAACGGGTTCCTCAAATGAAAGACAATGTAAGTGTTATTTGTATTTGCAGCATTTGTATTTCAGATCGTTGTCTTGGATGGGTTTCTTCCGTTTTCAGTTGCTGTTGTTGGTTACTGACGATACGGATGTGGTGCTCAACAAGAGAAGAGGATCAGG
AT

Intron 2 GTAATTGCAG ... CGCATTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	69.38	6.4	13	16
A2	87.95	3.2	21	24.4
A3	66.91	9.8	22	18
A4	71.05	3	4	11
A5	67.56	10.6	23	21.2
A6	62.27	28.4	27	64.2
A7	48.25	29.6	19	34.2
A8	43.6	19	10	19
A9	48.2	16.2	9	19.4
A10	58.08	13.2	12	24.4

>TRINITY_DN41613_c0_g1_i2 from sample A6 / Example spliced isoform

CAAGTGTAGTATCTGTTCTTATCAGTTCAATATCTGATACGTGGTTCATAGAACCACATGATATTAAATGTATTTTTATAGGGGGAGGGTCCACTTACAGTAGCTTGCTACTGGGGCTCTCAGGCGTCGCTTGAGCGTTGCACTACAGCACAAGCCCGGCGCACCCCAACAACACAAAAACAAATGTAATCAGTACATCC
CGGGGACGGCAGGCTAAGGACACAGAATCAGCGCGACATACCTGAGCAACACAAGCACGAAGTGTTGAATAGTTTGTGTTGAATACCCTTAAATGAAAGATCGTTGTCTTCGATGGGTTTGGTTTGGCTGAATTTCTTCTTCTTAACGGGTTCCTCAAATGAAAGACAATATGGTTGCATGGGTATAGAGGTCAATAATG
AATATCATTATTGTTGGTTATCATTGACAATCATCCATCCATATGCATGCGACACTCAATAAGAGAAGAGGATCAAGAAACCTGAGAATTCATTCAAGGTACACCATCAAGGAGCATGAGCATTCATTCAAGATATCCTTTGCAACTGTCTATACAAGGGACTTGTCAAGCACTTTGGAGCAAAAATATAATAGTTCAGA
ACTAGTCCAGAACACTCTCAACGAGTTGTTTCACAAAACCAAAGGTTACTTGGAG

>TRINITY_DN41613_c0_g1_i3 from sample A6 / Example unspliced isoform:

CAAGTGTAGTATCTGTTCTTATCAGTTCAATATCTGATACGTGGTTCATAGAACCACATGATATTAAATGTATTTTTATAGGGGGAGGGTCCACTTACAGTAGCTTGCTACTGGGGCTCTCAGGCGTCGCTTGAGCGTTGCACTACAGCACAAGCCCGGCGCACCCCAACAACACAAAAACAAATGTAATCAGTACATCC
CGGGGACGGCAGGCTAAGGACACAGAATCAGCGCGACATACCTGAGCAACACAAGCACGAAGTGTTGAATAGTTTGTGTTGAATACCCTTAAATGAAAGgtaattgcagacggtttagtttggctgaatttctctctttacgggttcctcagtgtttcagatcgttgtcttggatgggtttctttgcgcattgcagATCG
TTGTCTTCGATGGGTTTGGTTTGGCTGAATTTCTTCTTCTTAACGGGTTCCTCAAATGAAAGACAATATGGTTGCATGGGTATAGAGGTCAATAATGAATATCATTATTGTTGGTTATCATTGACAATCATCCATCCATATGCATGCGACACTCAATAAGAGAAGAGGATCAAGAAACCTGAGAATTCATTCAAGGTACA
CCATCAAGGAGCATGAGCATTCATTCAAGATATCCTTTGCAACTGTCTATACAAGGGACTTGTCAAGCACTTTGGAGCAAAAATATAATAGTTCAGAACTAGTCCAGAACACTCTCAACGAGTTGTTTCACAAAACCAAAGGTTACTTGGAG