sp|Q8W571|ATL32_ARATH ----> RING-H2 finger protein ATL32
Intron 1 GTTTGACAAA ... TTTGAGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 20 | 11 | 9 |
| A2 | 27.27 | 12 | 3 | 6 |
| A3 | 16.13 | 26 | 5 | 5 |
| A4 | 26.67 | 11 | 6 | 2 |
| A5 | 9.09 | 10 | 2 | 0 |
| A6 | 23.86 | 67 | 24 | 18 |
| A7 | 25.79 | 59 | 26 | 15 |
| A8 | 24.56 | 43 | 17 | 11 |
| A9 | 19.15 | 38 | 11 | 7 |
| A10 | 21.95 | 32 | 6 | 12 |
>TRINITY_DN105501_c0_g1_i3 from sample A1 / Example spliced isoformATTTGTCTTGTTCCCTTTAACAAACACAACCCCATTTCGATGCATCATACCCGGCCTTTCTAGGTGGCACTGACCTCATTAAATCTGCATCGTGCATTCTCAACTCCCACTCCAAACCCATTTTTCTGCCACACTTTCCTCCATTGTTCATGTGCTTCTGCTGCATCTGAATATCTAATGGCACACTTTGTTGTATTTTA
GTGTTTCCTCAACTTTTACAAAGCCTTCACTGGCGATCTTGGGTTCTCCGCTTGGCCTTCTTCCAGCCTGTCCTCCATCAGTACAAACGGTTACCCAATTAAGCTATTTCACCCATGATCCCATCCTCCTCCTATTCTGGTCAATGCCCATTTCAAAGTTCTAACTATGGCCACAATCCCGAGTCTTGAAAACTGACCTG
GATTCTGATTTAAAAACCTGGTTCTAATTTGAATGCAAATGTGAACAAAAGGCCTGATCCTGCAGAGGGGTATTCTTCTGGTTGAACTTTCTGAATTGGGTCCAATCAAGAAGGCCGTATTCTGATTGAAATCTTTGGTTTATGTTTAATACGAATGAAAAGGGCCTGTTCTTGTAGCTGAGTATTCTTCTGGGCTACCT
TTCTGGTTTGAATCCAATCAGGGTGAGGTTTATACTGCAATCCCAGCTTTGCTTAATACGCTAATGGAGAAAGGAAATCAATAAGGGGATTCTTGTCTGCAATCCTTCTCTCTAATCTATTCGTCAGCCTTTGAATCCTGGGATTTTGATAAGGATTCAAATAAGTTAATAGAAATCCAGATTTGTTTTGAAGATTGAAA
ATGGGATCAAGCAGTAGCAGAAATGCAGTCCCATCTTCCCCACCAGAAATAAATGAACCAAGAAGAGCAGAGGGGCATCGCAAGTTTCATTCTCGGTGTTTTTATCCTTCTACAGATTCTCCTGATAAAGCTCCAAATTCTGCTTCTCATGAGGGACCGTGTGGTGGGACTATGGCTACTGCAAGTGTGAATGAAGTTGT
AGGAGACAATGATCCCGTGAAGTCTCTTAGTGGAAAGATTAAATGCATATCTAAGTCTTCTATAAACTGTGTTGAAAGAAGTCAAAAAAGGCTTTTTCATCCGGTTTCTGATGCTAGCAGCAGCTCCACTCAGGTTTCTAGAGCTCAAGTACTAGAGTCCTCAAGCAATTTTCCCTGTAGAAGTTCAGATAGAGGTGAAA
TTGTTGAACAATCTGTTCACAATTGCAGCTTAAATGGTTCTAGTTGCAACAAACGCCATTCTAATGTTAGGTTAAGGAGGGCGAGAAGTTTAGGGTCATCAGAAGCCTATTCTTTCTTTGCAAGGAGACTTAGGCGTCAGTCTTCCAGTGTTGAACGGAACAGAGGGTTTGATAATGGTCACTCGAGAAACAGCAGTGAC
CAACAGCAAGTGCAGGGTAACAGGTCACACAATTTTTGTGAAAGTAGACCTGGGCATCAAAGTGAGCAGTCAATGCAATCAAGAGTTGGACAATGCACAGAGCTTCCTCTCAATGCACTAGAGTGGGGAGATGCATTTCCTGAACCTTCCAGAGAGGCACATCGTGACGATAGGGCTCGTGATGATAGGGCTTCCCAACA
TGATTTAACTTGCAACATCGATCAATCTGCAGCCTCTGTTCAAAATGTATCTTCTGTGATCCATTCCTATTCTACTCCAGTGGAGTCAAGGGATTCAAGACGTATCCAGAGAAGAGGGACACCTGAACATGTTGAAGACAATGTAAGTTTCAGAAGAACACGCAGTGTGGGGCGACTTCGTGACAGAGTGCTTAGGAGGA
CATCATCATCTGAGGGCTCTTTTGGCATTCTGCAAGGAGATTCTATAGCAAGGGATTCGAGACAACATAATGGGAGAAGGTTCTGGGAAGCGTTAACTAGAGCTTCCTCAAACAGACATGCTGGAACAACACCAACTCTTGCACAAGATCAGTTTCTTCGTACTCTTAGATCCATGAATGACAGTCGGAGACAAAGGGAG
GAGAGAAGCCACGTGAATGAAGACACACCTCATAATAACAGCAACATACTGGAACATAGAAGCCTGTACCTTGAGGAACGGAGGCGGAGGGCAAGATCTCAGGTTCGGGCTCTGCAACGTTTAAGCAGCAGTTTTGAGAATTTAGCTGGGCATGAGAGGTCATGTATTTTTGCTGGCCACCATCGTACAGGACGTTGCTC
CTGCCAAAATGTTGGAAGGACAGATGACTCAAATACCAGGGCAAGCATCTCAAGGATTATCATGTTGGCAGAAGCTCTGTTTGAGGTTCTTGATGAAATTCATCACCAGTCTATGGCGTTGTCCTCCCGATCCCCAGTTTCCTCGCTTGGATCGTTCCCTGCTCCTGATGATGTTGTTAACTCCATGCCAGTGCGGATGT
ACAGCAAAAAAGAAAACTGTGTAAATGAAGATGATGCACAGTGCTACATATGTCTTGTGGAGTATGAAGAAGGAGAACGTATGAGAGTGTTGCCCTGCCATCACGAATTTCATCTACTCTGTGTTGATAAATGGTTGAAAGAGGTTCACAGAGTTTGCCCACTTTGTCGGGGAAATGTTTGTGACAGCCTCACAAATCAG
GTGGGGGTAGCCTCACAAGGGGTGCTATAAAAGTGGTCTTTGCATGGGACACGTTTTGAGTTTGATTAACAAAATACCAACGTGAGGTTGGTATTCATGAATGAACACAACCTATTTTGAGAATACATCTTTTCGATGTAAATCTCTGTATTTTATCCCTCATAAGCAATAGTTTTGTTAGAAAATTCTTTTTTCTACTG
AGCTCAATCCAGCTGTAGTTCTGCATCACTTTAAATGCAAGCTTAGGATTGTATAGTTTATGTGTATATCTCATTGTTGG
>TRINITY_DN105501_c0_g1_i1 from sample A1 / Example unspliced isoform:ATTTGTCTTGTTCCCTTTAACAAACACAACCCCATTTCGATGCATCATACCCGGCCTTTCTAGGTGGCACTGACCTCATTAAATCTGCATCGTGCATTCTCAACTCCCACTCCAAACCCATTTTTCTGCCACACTTTCCTCCATTGTTCATGTGCTTCTGCTGCATCTGAATATCTAATGGCACACTTTGTTGTATTTTA
GTGTTTCCTCAACTTTTACAAAGCCTTCACTGGCGATCTTGGGTTCTCCGCTTGGCCTTCTTCCAGCCTGTCCTCCATCAGTACAAACGGTTACCCAATTAAGCTATTTCACCCATGATCCCATCCTCCTCCTATTCTGGTCAATGCCCATTTCAAAGTTCTAACTATGGCCACAATCCCGAGTCTTGAAAACTGACCTG
GATTCTGATTTAAAAACCTGGTTCTAATTTGAATGCAAATGTGAACAAAAGGCCTGATCCTGCAGAGGGGTATTCTTCTGGTTGAACTTTCTGAATTGGGTCCAATCAAGAAGGCCGTATTCTGATTGAAATCTTTGGTTTATGTTTAATACGAATGAAAAGGGCCTGTTCTTGTAGCTGAGTATTCTTCTGGGCTACCT
TTCTGGTTTGAATCCAATCAGGGTGAGGTTTATACTGCAATCCCAGCTTTGCTTAATACGCTAATGGAGAAAGGAAATCAATAAGGGGATTCTTGTCTGCAATCCTTCTCTCTAATCTATTCGTCAGCCTTTGAATCCTGGGATTTTGATAAGGATTCAAATAAGTTAATAGAAATCCAGATTTGTTTTGAAGATTGAAA
ATGGGATCAAGCAGTAGCAGAAATGCAGTCCCATCTTCCCCACCAGAAATAAATGAACCAAGAAGAGCAGAGGGGCATCGCAAGTTTCATTCTCGGTGTTTTTATCCTTCTACAGATTCTCCTGATAAAGCTCCAAATTCTGCTTCTCATGAGGGACCGTGTGGTGGGACTATGGCTACTGCAAGTGTGAATGAAGTTGT
AGGAGACAATGATCCCGTGAAGTCTCTTAGTGGAAAGATTAAATGCATATCTAAGTCTTCTATAAACTGTGTTGAAAGAAGTCAAAAAAGGCTTTTTCATCCGGTTTCTGATGCTAGCAGCAGCTCCACTCAGGTTTCTAGAGCTCAAGTACTAGAGTCCTCAAGCAATTTTCCCTGTAGAAGTTCAGATAGAGGTGAAA
TTGTTGAACAATCTGTTCACAATTGCAGCTTAAATGGTTCTAGTTGCAACAAACGCCATTCTAATGTTAGGTTAAGGAGGGCGAGAAGTTTAGGGTCATCAGAAGCCTATTCTTTCTTTGCAAGGAGACTTAGGCGTCAGTCTTCCAGTGTTGAACGGAACAGAGGGTTTGATAATGGTCACTCGAGAAACAGCAGTGAC
CAACAGCAAGTGCAGGGTAACAGGTCACACAATTTTTGTGAAAGTAGACCTGGGCATCAAAGTGAGCAGTCAATGCAATCAAGAGTTGGACAATGCACAGAGCTTCCTCTCAATGCACTAGAGTGGGGAGATGCATTTCCTGAACCTTCCAGAGAGGCACATCGTGACGATAGGGCTCGTGATGATAGGGCTTCCCAACA
TGATTTAACTTGCAACATCGATCAATCTGCAGCCTCTGTTCAAAATGTATCTTCTGTGATCCATTCCTATTCTACTCCAGTGGAGTCAAGGGATTCAAGACGTATCCAGAGAAGAGGGACACCTGAACATGTTGAAGACAATGTAAGTTTCAGAAGAACACGCAGTGTGGGGCGACTTCGTGACAGAGTGCTTAGGAGGA
CATCATCATCTGAGGGCTCTTTTGGCATTCTGCAAGGAGATTCTATAGCAAGGGATTCGAGACAACATAATGGGAGAAGGTTCTGGGAAGCGTTAACTAGAGCTTCCTCAAACAGACATGCTGGAACAACACCAACTCTTGCACAAGATCAGTTTCTTCGTACTCTTAGATCCATGAATGACAGTCGGAGACAAAGGGAG
GAGAGAAGCCACGTGAATGAAGACACACCTCATAATAACAGCAACATACTGGAACATAGAAGCCTGTACCTTGAGGAACGGAGGCGGAGGGCAAGATCTCAGGTTCGGGCTCTGCAACGTTTAAGCAGCAGTTTTGAGAATTTAGCTGGGCATGAGAGGTCATGTATTTTTGCTGGCCACCATCGTACAGGACGTTGCTC
CTGCCAAAATGTTGGAAGGACAGATGACTCAAATACCAGGGCAAGCATCTCAAGGATTATCATGTTGGCAGAAGCTCTGTTTGAGgtttgacaaaatgcttcagttgtttttcaaattcattctgaaggctgaattagagtcttagtcagcgctgatcatatatgatgtccgtttggttgattcaatatggtttttaaag
gtaccttaacaatgaataggttgtttgagtcagGTTCTTGATGAAATTCATCACCAGTCTATGGCGTTGTCCTCCCGATCCCCAGTTTCCTCGCTTGGATCGTTCCCTGCTCCTGATGATGTTGTTAACTCCATGCCAGTGCGGATGTACAGCAAAAAAGAAAACTGTGTAAATGAAGATGATGCACAGTGCTACATATG
TCTTGTGGAGTATGAAGAAGGAGAACGTATGAGAGTGTTGCCCTGCCATCACGAATTTCATCTACTCTGTGTTGATAAATGGTTGAAAGAGGTTCACAGAGTTTGCCCACTTTGTCGGGGAAATGTTTGTGACAGCCTCACAAATCAGGTGGGGGTAGCCTCACAAGGGGTGCTATAAAAGTGGTCTTTGCATGGGACAC
GTTTTGAGTTTGATTAACAAAATACCAACGTGAGGTTGGTATTCATGAATGAACACAACCTATTTTGAGAATACATCTTTTCGATGTAAATCTCTGTATTTTATCCCTCATAAGCAATAGTTTTGTTAGAAAATTCTTTTTTCTACTGAGCTCAATCCAGCTGTAGTTCTGCATCACTTTAAATGCAAGCTTAGGATTGT
ATAGTTTATGTGTATATCTCATTGTTGG
Intron 2 GTTCTTGATG ... TCATCACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.84 | 21 | 20 | 17 |
| A2 | 55.56 | 10 | 12 | 13 |
| A3 | 48 | 26 | 26 | 22 |
| A4 | 46.34 | 11 | 11 | 8 |
| A5 | 50 | 9 | 10 | 8 |
| A6 | 46.88 | 68 | 67 | 53 |
| A7 | 47.23 | 62 | 59 | 52 |
| A8 | 50 | 40 | 43 | 37 |
| A9 | 49.32 | 37 | 38 | 34 |
| A10 | 56.76 | 24 | 32 | 31 |
>TRINITY_DN39511_c0_g1_i2 from sample A8 / Example spliced isoformCTGTGATTGTGTATGTCTGCTATTTGAAATGGAATTGGAATCTATTGGGCGTGGTTTGATTTGTCTTGTTCCCTTTAACAAACACAACCCCATTTCGATGCATCATACCCGGCCTTTCTAGGTGGCACTGACCTCATTAAATCTGCATCGTGCATTCTCAACTCCCACTCCAAACCCATTTTTCTGCCACACTTTCCTCC
ATTGTTCATGTGCTTCTGCTGCATCTGAATATCTAATGGCACACTTTGTTGTATTTTAGTGTTTCCTCAACTTTTACAAAGCCTTCACTGGCGATCTTGGGTTCTCCGCTTGGCCTTCTTCCAGCCTGTCCTCCATCAGTACAAACGGTTACCCAATTAAGCTATTTCACCCATGATCCCATCCTCCTCCTATTCTGGTC
AATGCCCATTTCAAAGTTCTAACTATGGCCACAATCCCGAGTCTTGAAAACTGACCTGGATTCTGATTTAAAAACCTGGTTCTAATTTGAATGCAAATGTGAACAAAAGGCCTGATCCTGCAGAGGGGTATTCTTCTGGTTGAACTTTCTGAATTGGGTCCAATCAAGAAGGCCGTATTCTGATTGAAATCTTTGGTTTA
TGTTTAATACGAATGAAAAGGGCCTGTTCTTGTAGCTGAGTATTCTTCTGGGCTACCTTTCTGGTTTGAATCCAATCAGGGTGAGGTTTATACTGCAATCCCAGCTTTGCTTAATACGCTAATGGAGAAAGGAAATCAATAAGGGGATTCTTGTCTGCAATCCTTCTCTCTAATCTATTCGTCAGCCTTTGAATCCTGGG
ATTTTGATAAGGATTCAAATAAGTTAATAGAAATCCAGATTTGTTTTGAAGATTGAAAATGGGATCAAGCAGTAGCAGAAATGCAGTCCCATCTTCCCCACCAGAAATAAATGAACCAAGAAGAGCAGAGGGGCATCGCAAGTTTCATTCTCGGTGTTTTTATCCTTCTACAGATTCTCCTGATAAAGCTCCAAATTCTG
CTTCTCATGAGGGACCGTGTGGTGGGACTATGGCTACTGCAAGTGTGAATGAAGTTGTAGGAGACAATGATCCCGTGAAGTCTCTTAGTGGAAAGATTAAATGCATATCTAAGTCTTCTATAAACTGTGTTGAAAGAAGTCAAAAAAGGCTTTTTCATCCGGTTTCTGATGCTAGCAGCAGCTCCACTCAGGTTTCTAGA
GCTCAAGTACTAGAGTCCTCAAGCAATTTTCCCTGTAGAAGTTCAGATAGAGGTGAAATTGTTGAACAATCTGTTCACAATTGCAGCTTAAATGGTTCTAGTTGCAACAAACGCCATTCTAATGTTAGGTTAAGGAGGGCGAGAAGTTTAGGGTCATCAGAAGCCTATTCTTTCTTTGCAAGGAGACTTAGGCGTCAGTC
TTCCAGTGTTGAACGGAACAGAGGGTTTGATAATGGTCACTCGAGAAACAGCAGTGACCAACAGCAAGTGCAGGGTAACAGGTCACACAATTTTTGTGAAAGTAGACCTGGGCATCAAAGTGAGCAGTCAATGCAATCAAGAGTTGGACAATGCACAGAGCTTCCTCTCAATGCACTAGAGTGGGGAGATGCATTTCCTG
AACCTTCCAGAGAGGCACATCGTGACGATAGGGCTCGTGATGATAGGGCTTCCCAACATGATTTAACTTGCAACATCGATCAATCTGCAGCCTCTGTTCAAAATGTATCTTCTGTGATCCATTCCTATTCTACTCCAGTGGAGTCAAGGGATTCAAGACGTATCCAGAGAAGAGGGACACCTGAACATGTTGAAGACAAT
GTAAGTTTCAGAAGAACACGCAGTGTGGGGCGACTTCGTGACAGAGTGCTTAGGAGGACATCATCATCTGAGGGCTCTTTTGGCATTCTGCAAGGAGATTCTATAGCAAGGGATTCGAGACAACATAATGGGAGAAGGTTCTGGGAAGCGTTAACTAGAGCTTCCTCAAACAGACATGCTGGAACAACACCAACTCTTGC
ACAAGATCAGTTTCTTCGTACTCTTAGATCCATGAATGACAGTCGGAGACAAAGGGAGGAGAGAAGCCACGTGAATGAAGACACACCTCATAATAACAGCAACATACTGGAACATAGAAGCCTGTACCTTGAGGAACGGAGGCGGAGGGCAAGATCTCAGGTTCGGGCTCTGCAACGTTTAAGCAGCAGTTTTGAGAATT
TAGCTGGGCATGAGAGGTCATGTATTTTTGCTGGCCACCATCGTACAGGACGTTGCTCCTGCCAAAATGTTGGAAGGACAGATGACTCAAATACCAGGGCAAGCATCTCAAGGATTATCATGTTGGCAGAAGCTCTGTTTGAGTCTATGGCGTTGTCCTCCCGATCCCCAGTTTCCTCGCTTGGATCGTTCCCTGCTCCT
GATGATGTTGTTAACTCCATGCCAGTGCGGATGTACAGCAAAAAAGAAAACTGTGTAAATGAAGATGATGCACAGTGCTACATATGTCTTGTGGAGTATGAAGAAGGAGAACGTATGAGAGTGTTGCCCTGCCATCACGAATTTCATCTACTCTGTGTTGATAAATGGTTGAAAGAGGTTCACAGAGTTTGCCCACTTTG
TCGGGGAAATGTTTGTGACAGCCTCACAAATCAGGTGGGGGTAGCCTCACAAGGGGTGCTATAAAAGTGGTCTTTGCATGGGACACGTTTTGAGTTTGATTAACAAAATACCAACGTGAGGTTGGTATTCATGAATGAACACAACCTATTTTGAGAATACATCTTTTCGATGTAAATCTCTGTATTTTATCCCTCATAAG
CAATAGTTTTGTTAGAAAATTCTTTTTTCTACTGAGCTCAATCCAGCTGTAGTTCTGCATCACTTTAAATGCAAGCTTAGGATTGTATAGTTTATGTGTATATCTCATTGTTGGTCATTTCAAATCCATTTTTTTGGAGAAGCAATTATATTAATTTGTAATTTTGTAGCTATGCTTCACATAATTAGTGCTTTTTTTTT
AATGTAGACTAGTGTCCCAAATATAAAAATGCAGGAGCAAAGTGAACTGCAAGAGTTCTCGTGTCTATAAGATATGTTTTTTCAACCCAGATTATATACTGCAATCAATCAGTGAATACTTTTAGCCTTACAATTCGAAATTTAGACATTTCTCTAATGTCCTCTGTAGTTGGAGTCAATTTGTTATAAAGGCAGATGAT
CGGGG
>TRINITY_DN39511_c0_g1_i1 from sample A8 / Example unspliced isoform:TATCCCCTGTGTGCCTTGGCAGTTTCAGAAGAACACGCAGTGTGGGGCGACTTCGTGACAGAGTGCTTAGGAGGACATCATCATCTGAGGGCTCTTTTGGCATTCTGCAAGGAGATTCTATAGCAAGGGATTCGAGACAACATAATGGGAGAAGGTTCTGGGAAGCGTTAACTAGAGCTTCCTCAAACAGACATGCTGGA
ACAACACCAACTCTTGCACAAGATCAGTTTCTTCGTACTCTTAGATCCATGAATGACAGTCGGAGACAAAGGGAGGAGAGAAGCCACGTGAATGAAGACACACCTCATAATAACAGCAACATACTGGAACATAGAAGCCTGTACCTTGAGGAACGGAGGCGGAGGGCAAGATCTCAGGTTCGGGCTCTGCAACGTTTAAG
CAGCAGTTTTGAGAATTTAGCTGGGCATGAGAGGTCATGTATTTTTGCTGGCCACCATCGTACAGGACGTTGCTCCTGCCAAAATGTTGGAAGGACAGATGACTCAAATACCAGGGCAAGCATCTCAAGGATTATCATGTTGGCAGAAGCTCTGTTTGAGgttcttgatgaaattcatcaccagTCTATGGCGTTGTCCT
CCCGATCCCCAGTTTCCTCGCTTGGATCGTTCCCTGCTCCTGATGATGTTGTTAACTCCATGCCAGTGCGGATGTACAGCAAAAAAGAAAACTGTGTAAATGAAGATGATGCACAGTGCTACATATGTCTTGTGGAGTATGAAGAAGGAGAACGTATGAGAGTGTTGCCCTGCCATCACGAATTTCATCTACTCTGTGTT
GATAAATGGTTGAAAGAGGTTCACAGAGTTTGCCCACTTTGTCGGGGAAATGTTTGTGACAGCCTCACAAATCAGGTGGGGGTAGCCTCACAAGGGGTGCTATAAAAGTGGTCTTTGCATGGGACACGTTTTGAGTTTGATTAACAAAATACCAACGTGAGGTTGGTATTCATGAATGAACACAACCTATTTTGAGAATA
CATCTTTTCGATGTAAATCTCTGTATTTTATCCCTCATAAGCAATAGTTTTGTTAGAAAATTCTTTTTTCTACTGAGCTCAATCCAGCTGTAGTTCTGCATCACTTTAAATGCAAGCTTAGGATTGTATAGTTTATGTGTATATCTCATTGTTGGTCATTTCAAATCCATTTTTTTGGAGAAGCAATTATATTAATTTGT
AATTTTGTAGCTATGCTTCACATAATTAGTGCTTTTTTTTTAATGTAGACTAGTGTCCCAAATATAAAAATGCAGGAGCAAAGTGAACTGCAAGAGTTCTCGTGTCTATAAGATATGTTTTTTCAACCCAGATTATATACTGCAATCAATCAGTGAATACTTTTAGCCTTACAATTCGAAATTTAGACATTTCTCTAATG
TCCTCTGTAGTTGGAGTCAATTTGTTATAAAGGCAGATGATCGGGG