sp|Q9LND7|SKI16_ARATH ----> F-box protein SKIP16
Intron 1 GTAACATTCT ... TTCTGATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.25 | 15 | 0 | 1 |
| A2 | 0 | 28 | 0 | 0 |
| A3 | 35.57 | 24 | 4 | 13 |
| A4 | 28.24 | 20.3 | 0 | 8 |
| A5 | 36.75 | 8.7 | 0 | 5 |
| A6 | 9.72 | 93.3 | 0 | 10 |
| A7 | 8.58 | 64 | 0 | 6 |
| A8 | 8.02 | 80.3 | 0 | 7 |
| A9 | 17.52 | 75.3 | 0 | 16 |
| A10 | 3.37 | 57.3 | 0 | 2 |
>TRINITY_DN103467_c0_g1_i4 from sample A3 / Example spliced isoformTGATAAAGGTCGGCGGAAGTGACTTGCCGGGGAAGGAGGGGCGGTTGCGATTGCGCCACGACATCATGTCCATGACCGTGACCGTGACCTCCGCGGCAAATGATGGATAGGGCTATTACTCTTTGATAGATCTCATCGACATTATATTTTGTCGCGGGAGTTTAGGCTGCAGCAGGGAGGTTGAGTGATAGTTTGATTGT
CAGAAAGTAGAGCAGATCATAGAGATTGAAATTGAGATTGCGCATGGAAGATTTGCAGGAGCCAATTCTACAATTAATATTGCTGAGAACAGATGCCAAAAGGACGGCAAAACTTGGGTGTGTGAGCCAGCGGTGGCATTCTGTGGCTTCCGATGACCATGTCTGGTCTCGCTTTTGCGCTCAAGATTTCAATGTTTCGT
CTCGCATCGATCCTTCTGGAAGCTCTTGTTCGTCTTACAAGGAAACCTATGAGAAATGGCACGAAGCATTTTGCATGTATCCTTTATCGATCGTAAGAAGAGCCAAGCATTGCTGGGATAGTATTAGAAATTGGACCTCAATCCATTTTCCAGAGGTGACAAATACTTTAGCACTCGGGGCATCTGAAGATGAAATTAGG
AGGACAGAGGATAAACTTGGGTGGCAACTACCTGTTTCTACAAGGATTCTGTATCGTTTTTGTAATGGCCAAGTAGTCCCGCATGGTAGTTCTTCTCAAACTAAGCAGCTATCTGTCTTGGGCCTTTTAGGAGGTTATCATTTTTATGACCACATTGTTAACGTGCGTTTGTTACCCTTGAAAGAGATTTTGAAACTCAC
TAAATATTGTGCTTCATGTATAAGACTCCCTAGAGGGTCAAAGCATACTGTTGTTGCAGCTTCATGTAATATGAATAAGTTTTTTTTCCTCGACTGTTCTGATGGCCAACTTTATGTTGGCACTAAGAACCTTGCTGAAAGTGGGGAGATGATGCCATGTGTGTCTAGTACATTGGTAGATGTAGCTCAGCAAGATGCGA
TGCTCCTGTGGTTGGAAGAATATGGCAGACAATTAGAAGCTGGATTGCTTTCTGTTCGCAAAGATGGTGATATTCGGAGTATCGCTTTGTTTCCTGAAAAGCCGCCTCCATGTAGTGAGGCTGTGACAAATGGTGTACAGGTACGCGCTTCTGCAGTGTTTGTGCCAGAGGCTAGCGATTTACAGGATAGCAGTGAAAAA
TATTATTTTTGCTATTCAATTCGCATGTGCCTGTTACGCCAAGAAAAAATTTCTGAGGGGAAATTGTTAAGTTCATGCCAACTAGCTAGAAGGCATTGGATAATTCGAGCAAATGACACTATCATAGATGATGTTCATGGTGAAGCTGTTATTGGGAAGTATCCATATTTGAAAGAAGGCGGTGATGTATTTGTATATCA
GAGCTGCAGTCCTCTGCCAGTTTCTTCTGGCTCAGTTGAAGGTGATTTTACATTTGTTCCTGGAAGGTTAAGCAAGCCCGATGGACCAGAATTCAGTGTCCGGGTGGCTCCATTTCCTCTTGAGATTCCTCAGTATATATTTTGATTGCCAAGAATGCAAAAGTGAGATTGTGCTAATTCAAAGAGCTTTGATACATAAC
TCGAAAGTGGACAGTGACAGGAAGGTGATGTTTCTGTTGGGGCAAACGAAATTTCTACACTCTAGACTCGAACTCTGAGGCATAGGCACTGCTGTGCTGTGGTAGGGTTAATTGGTGTTTTTAATGGCATCTAAACTACACTCTAGACCCCTTGAACTCTGAGGCATAGGCACTGTCTGTGCTGTGGTAGGGTTAATTGG
TGTTTTTAATGGCATCTAAACTACACTCTAGACCCCTTGAACTCTGAGGCATAGGCACTGTCTGTGCTGTGGTAGGGTTAATTG
>TRINITY_DN103467_c0_g1_i7 from sample A3 / Example unspliced isoform:TGAAGCTGTTATTGGGAAGgtaacattctgaaaagctagtttttatattttctaataagttgagatttcatgtttggttggtatttctaacttagagttggttctgatcagTATCCATATTTGAAAGAAGGCGGTGATGTATTTGTATATCAGAGCTGCAGTCCTCTGCCAGTTTCTTCTGGCTCAGTTGAAGGTGATTT
TACATTTGTTCCTGGAAGGTATGTAATTAGTACGAACTTCATCTGTTTGTTATATTT
Intron 2 GTATGTAATT ... GATGGTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.32 | 28 | 9 | 4.5 |
| A2 | 25 | 36 | 12 | 6 |
| A3 | 35.29 | 22 | 12 | 5 |
| A4 | 33.33 | 22 | 11 | 3.5 |
| A5 | 36.55 | 13 | 7.5 | 2.5 |
| A6 | 9.77 | 157 | 17 | 22.5 |
| A7 | 16.11 | 125 | 24 | 18 |
| A8 | 15.97 | 121 | 23 | 20.5 |
| A9 | 12 | 110 | 15 | 19.5 |
| A10 | 14.85 | 86 | 15 | 15.5 |
>TRINITY_DN88318_c1_g1_i4 from sample A4 / Example spliced isoformTGTGATGATAAAGGTCGGCGGAAGTGACTTGCCGGGGAAGGAGGGGCGGTTGCGATTGCGCCACGACATCATGTCCATGACCGTGACCGTGACCTCCGCGGCAAATGATGGATAGGGCTATTACTCTTTGATAGATCTCATCGACATTATATTTTGTCGCGGGAGTTTAGGCTGCAGCAGGGAGGTTGAGTGATAGTTTG
ATTGTCAGAAAGTAGAGCAGATCATAGAGATTGAAATTGAGATTGCGCATGGAAGATTTGCAGGAGCCAATTCTACAATTAATATTGCTGAGAACAGATGCCAAAAGGACGGCAAAACTTGGGTGTGTGAGCCAGCGGTGGCATTCTGTGGCTTCCGATGACCATGTCTGGTCTCGCTTTTGCGCTCAAGATTTCAATGT
TTCGTCTCGCATCGATCCTTCTGGAAGCTCTTGTTCGTCTTACAAGGTACGCGCTTCTGCAGTGTTTGTGCCAGAGGCTAGCGATTTACAGGATAGCAGTGAAAAATATTATTTTTGCTATTCAATTCGCATGTGCCTGTTACGCCAAGAAAAAATTTCTGAGGGGAAATTGTTAAGTTCATGCCAACTAGCTAGAAGGC
ATTGGATAATTCGAGCAAATGACACTATCATAGATGATGTTCATGGTGAAGCTGTTATTGGGAAGTATCCATATTTGAAAGAAGGCGGTGATGTATTTGTATATCAGAGCTGCAGTCCTCTGCCAGTTTCTTCTGGCTCAGTTGAAGGTGATTTTACATTTGTTCCTGGAAGGTTAAGCAAGCCCGATGGACCAGAATTC
AGTGTCCGGGTGGCTCCATTTCCTCTTGAGATTCCTCAGTATATATTTTGATTGCCAAGAATGCAAAAGTGAGATTGTGCTAATTCAAAGAGCTTTGATACATAACTCGAAAGTGGACAGTGACAGGAAGGTGATGTTTCTGTTGGGGCAAACGAAATTTCTACACTCTAGACTCGAACTCTGAGGCATAGGCACTGCTG
TGCTGTGGTAGGGTTAATTGGTGTTTTTAATGGCATCTAAACTACACTCTAGACCCCTTGAACTCTGAGGCATAGGCACTGTCTGTGCTGTGGTAGGGTTAATTGGTGTTTTTAATGGCATCTTTTAGAATCTAGTTTATGTAAATATTATGCCTTTTGGCATTATCAGCATTCTGGTGTTGTTGACGTCAAAGTTTATC
CCTTAAATTAAAAAATAAAATAAAATTGGGGACTGTTGCTTCTGGATTGCTCTATAAGATAGTTTTTATTGGCAAATTATTATGCTGGC
>TRINITY_DN88318_c1_g1_i3 from sample A4 / Example unspliced isoform:TGTGATGATAAAGGTCGGCGGAAGTGACTTGCCGGGGAAGGAGGGGCGGTTGCGATTGCGCCACGACATCATGTCCATGACCGTGACCGTGACCTCCGCGGCAAATGATGGATAGGGCTATTACTCTTTGATAGATCTCATCGACATTATATTTTGTCGCGGGAGTTTAGGCTGCAGCAGGGAGGTTGAGTGATAGTTTG
ATTGTCAGAAAGTAGAGCAGATCATAGAGATTGAAATTGAGATTGCGCATGGAAGATTTGCAGGAGCCAATTCTACAATTAATATTGCTGAGAACAGATGCCAAAAGGACGGCAAAACTTGGGTGTGTGAGCCAGCGGTGGCATTCTGTGGCTTCCGATGACCATGTCTGGTCTCGCTTTTGCGCTCAAGATTTCAATGT
TTCGTCTCGCATCGATCCTTCTGGAAGCTCTTGTTCGTCTTACAAGGTACGCGCTTCTGCAGTGTTTGTGCCAGAGGCTAGCGATTTACAGGATAGCAGTGAAAAATATTATTTTTGCTATTCAATTCGCATGTGCCTGTTACGCCAAGAAAAAATTTCTGAGGGGAAATTGTTAAGTTCATGCCAACTAGCTAGAAGGC
ATTGGATAATTCGAGCAAATGACACTATCATAGATGATGTTCATGGTGAAGCTGTTATTGGGAAGTATCCATATTTGAAAGAAGGCGGTGATGTATTTGTATATCAGAGCTGCAGTCCTCTGCCAGTTTCTTCTGGCTCAGTTGAAGGTGATTTTACATTTGTTCCTGGAAGgtatgtaattagtacgaacttcatctgt
ttgttatatttacactctgacacatattgtgtccttaatatgaattttgatggtgaagGTTAAGCAAGCCCG