NA ----> NA
Intron 1 GTATGCTGTT ... GAATTAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 1 | 0 | 1 |
| A2 | 25 | 3 | 1 | 1 |
| A3 | 71.43 | 1 | 3 | 2 |
| A4 | 100 | 0 | 0 | 1 |
| A5 | 38.46 | 4 | 0 | 5 |
| A6 | 40.91 | 39 | 19 | 35 |
| A7 | 39.33 | 27 | 10 | 25 |
| A8 | 32 | 17 | 4 | 12 |
| A9 | 36.84 | 6 | 3 | 4 |
| A10 | 43.79 | 16 | 11 | 14 |
>TRINITY_DN43289_c0_g1_i1 from sample A7 / Example spliced isoformGGGGCGACTTGACCTAGCTCGGCGCCGGAGGAAGACTTCTTCACGCCGGGGAAACTCTGCCGAGGGAGAGTGATACCCTGTTTTGCTGCGTGAAGGGAGACGAGTGCTCTGTCTTTCATTTTCTGTTTTTGCATTTATCCACTAAAGGAGAAACGCTCAGCTATGTGGGGGCAATCTCACTGTGTTCTCTTAAGCGTTGC
ATTGGTTTTAATGCTGAGAAAAGGGGGATGCCAATGATGGATGGAAGAGCCGAAAGCTCTACGTTTCGTTTAGATTGGCTTCTATCCACTATTTGTTTGGTTGTGCGTTGAGCTAGGCAAAACGGTGTGGAAATTTGTTGATCCCTCTGTATTTTAGTGGGTGTGTGCTGCATGAATAATGGGCTAGACCGGCGTGGTTA
ATGGAGAGGGCATAGCCCTGTGACCCATTCGGCATTTCATGTTAACCCTTACACAGCTAGCGTCCCAACACACCGATAAGGCGCAGCTGAGGCCCATACGAAATTTTATATGGTTACTCGGTTTCCTGCGTAGAGCGTGATGCTCAGAATTGACCCGGCTGTGTTTTGGTGACACTATTTACTGCGTGGAGATTGGAGAG
AGAATCATGCTCCTGTGTTGACACCCTCATTTTTCTTGTTGCTCATTGAAATATATGGTTTATGTTACATGTGGGAGTTCGACCCGGTCTCCGTTTTGATTGTTGAATGAAAAACGAGTGTTGCTCTGTCTCTTCCTTCAGGGATAGAGAAAGTATAAAAAAAAAAGAGTCCTTGTCTACTGCCAGCGACAGCGTGGGTG
CTAGAGATGCCTTTATACTTTGAAGGAACCCTGCTAGAGATGCATTTTTGCTAGGCATTCTGATTGTTTATTTTACCTCTGCGTGAATGTGAATTAGCAGGGACACTCTGCATACTTGACTCGGCGGAAAGCTATATGAGAGTTTTGCTGCTCGGTGTAAATGGGACACTCTGCATACTTGACTCGGCGGAAAGCTATAT
GAGAGTTTTGCTGCTCGGTGTAAATGGTATGCTGTACTTTAGACTACCACCGAGTTGGTAGTATCCCTGTTGGGACCCCTCCTTGATGCATTTAATTGGTTTGGAGGATTTAGTTTAATTGTCTTACGGCTGTAGTTTATTTTTCATTTATGCATGTTGCCATCGAATCGAACTGGAACCTGCCAGGGAATATATATAGA
TATACCCCTTTTTGTGTTATATACATATATACAAATGATGTATGATTTGTGCTTTAAATATATCATACAACGATTATAGTTATACCATGGTTACATTCTTATGTACATGGTAGGAATGGTCTTGTCTTGATTT
>TRINITY_DN43289_c0_g1_i2 from sample A7 / Example unspliced isoform:AATGTGAATTAGCAGGGACACTCTGCATACTTGACTCGGCGGAAAGCTATATGAGAGTTTTGCTGCTCGGTGTAAATGGTATGCTGTCCTTTATACTTTGAAGGAACCCTGCTAGAGATGCATTTTGCTAGGCATTCTGATTGTTTATTTTACCTCTGCGTGAATGTGAATTAGCAGGGACACTCTGCATACTTGACTCG
GCGGAAAGCTATATGAGAGTTTTGCTGCTCGGTGTAAATGgtatgctgttctttatactttgaaggaaccctactagagatgcattttgctaggcattctgattgtttattttacctctgcgtgaatgtgaattagcagGGACACTCTGCATACTTGACTCGGCGGAAAGCTATATGAGAGTTTTGCTGCTCGGTGTAAA
TGGTATGCTGTACTTTAGACTACCACCGAGTTGGTAGTATCCCTGTTGGGACCCCTCCTTGATGCATTTAATTGGTTTGGAGGATTTAGTTTAATTGTCTTACGGCTGTAGTTTATTTTTCATTTATGCATGTTGCCATCGAATCGAACTGGAACCTGCCAGGGAATATATATAGATATACCCCTTTTTGTGTTATATAC
ATATATACAAATGATGTATGATTTGTGCTTTAAATATATCATACAACGATTATAGTTATACCATGGTTACATTCTTATGTACATGGTAGGAATGGTCTTGTCTTGATTT