sp|O48726|RPN13_ARATH ----> 26S proteasome regulatory subunit RPN13
Intron 1 GTATAATATC ... AATTCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.11 | 5 | 0 | 0.7 |
| A2 | 49.86 | 8 | 7 | 8.3 |
| A3 | 20.51 | 9 | 0.3 | 2.7 |
| A4 | 36.91 | 12 | 5.3 | 7.3 |
| A5 | 38.55 | 12 | 5 | 8.3 |
| A6 | 24.13 | 41 | 2 | 14.7 |
| A7 | 27.22 | 14.3 | 1 | 6.7 |
| A8 | 25.93 | 11 | 0.3 | 4.7 |
| A9 | 19.05 | 15 | 0.3 | 4 |
| A10 | 27.27 | 13 | 0.7 | 6 |
>TRINITY_DN110228_c0_g1_i3 from sample A2 / Example spliced isoformACTCACCATTAGGTGGCTGCTTGTTCATTTCTGAGAGTGGCATCATTTTGACACACAGCACCACCTAAAGCCCTTGGACCTCTAGGGAAGATGTGATAAAAATTTGGCACATAACACCTCATGATTCGTTGCTTTATATTAATACTTTTGATACAGGAGATCATGCTGGAATTTCGAGCCGGAATTATGTCACGGCAGGG
GACACTAGTTGTGCCAGATACTCGTAGAGGACTTGTTCGTGTAGTTAGGGGAGATGAGGGGTTGTTGCACTTTCAATGGCTTGTTCGAACAAGTAATGTGGCAGAAATTGATCATATTGTATTTCCCGATGAAGCTGTATTTGAAAAGGTCCAGGAAACCAACGAACGAGTGTACATTTTGAAATTCAAGGAGGATGATC
GCAAATTGCTCTTTTGGATGCAGGAACCCAAAGCTGACGGTGATTCACAGATATGCAGCTCTGTTAACTACTTCATTAATCGCCCAATGGAGGAAGGAGATGAGGTTGAAACTTCGGCATCTCTCCAGAAGTCAGAAACCTCAGACGTTGCTGTTGGAATTGAAGTCTCTTCTAGAGATGCAAATGCAGGGGAGCCTGTA
TCATCTAATGAAGCCTTATCTGGAGATTTAAACCCCTCTGCTGGACCTGTGCAGCTTGCAGATTTGCAGAGAGTATTGAGTAGCCTGGAAGGGAACATTTTAGTGGCACAAGATACAGGGCCAAGTTTAGGAGATCTTCTGAAGCCTGAATTAGTTCTGCCATTGCTGGAACAGTTCTCTTTGGAAGAACGACTTGCACC
CTATTTGCCAGAGGGTAACTGGACTCGTGAAGCTTTTCTAGAACTACTGCAAAGCCCTCAGTTCCGTCAACAAGTGGAGGCTTTTAGTTATGTTCTCCAGACAGGCCAAATTGATTTGTCCCAGTTTGGGATTGATCCTAGCAAGTATAATTTCACCGTGGCATCTTTTCTGGAGGCCTTGGATGATGCAGTTGCAAAGA
ACCCAGAAACAGGTGGTGCTATTGATTCTTTAGCTGCATCTGCTCCAGAAAGTAGGCAAGAGGATAATAAAGACATTGATTGTAGTTCTCAGAAACGAAGTGCTGGTACAGATTCGATGGATGAAGGTCATTAGTGCAGAGTGTATTTTTCTCTTGTTAATTCACTTGCCTTATTTCTTCACCCTTGCCTCCGATTGCTT
CTCGGAGGAAAAGTAAGATGCGGGTGGAGTCTTTGCTGTTAGATTGTTTTATTATATGTGTGTCAATATTTGTATTTAAGTATAATTGCTAATATAATTAG
>TRINITY_DN110228_c0_g1_i6 from sample A2 / Example unspliced isoform:GCCTCTCATTTGCTTCTTTATATACCCTTTTCTGGTCTGCATTACATTCTTATGATTTTGACCCCTTGATAGATGAAACATGTAGAATTGATAACTAGGCCAACTGAATTTTGGTTCCTTTTGTATGCTTTTTTAACATTGTCTTATTCATGTGCATAATGTATTTTATAATGCTTCGAGCTTGCAGAGATGCAAATGCA
GGGGAGCCTGTATCATCTAATGAAGCCTTATCTGGAGATTTAAACCCCTCTGCTGGACCTGTGCAGCTTGCAGATTTGCAGAGAGTATTGAGTAGCCTGGGTAATTGGCTCATTATTGTGCAGTATTTCTTCCAAAATCAATATGTAGTGTGTTGTACTTTTTTGGGCCATGCAGTTTTATTATTATTTATTGTTTGTTT
GATGCAGAAGGGAACATTTTAGTGGCACAAGATACAGgtataatatcgagtttcacaaaatttgatgttgcttgacttcctcttaataaatatcttgcttagtaatgtggcaaaagtttccattttgttgttttattaaatcaaagtttaattcaacagGGCCAAGTTTAGGAGATCTTCTGAAGCCTGAATTAGTTCTG
CCATTGCTGGAACAGTTCTCTTTGGAAGAACGACTTGCACCCTATTTGCCAGAGGTTTGCCCAATAATTATGCAGTTGAATCCCCTTTCAAATGGAGTTACTTTTTCGGAGGATGATGTAGTGAATTTTTAATTTTGAGCATGTGGC
Intron 2 GTAATTGGCT ... TTTGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20 | 10 | 5 | 0 |
| A2 | 33.33 | 6 | 1 | 5 |
| A3 | 0 | 9 | 0 | 0 |
| A4 | 24.14 | 11 | 4 | 3 |
| A5 | 58.33 | 5 | 5 | 9 |
| A6 | 1.59 | 31 | 1 | 0 |
| A7 | 0 | 8 | 0 | 0 |
| A8 | 5.26 | 9 | 1 | 0 |
| A9 | 5.26 | 9 | 1 | 0 |
| A10 | 12 | 11 | 2 | 1 |
>TRINITY_DN110228_c0_g1_i3 from sample A2 / Example spliced isoformACTCACCATTAGGTGGCTGCTTGTTCATTTCTGAGAGTGGCATCATTTTGACACACAGCACCACCTAAAGCCCTTGGACCTCTAGGGAAGATGTGATAAAAATTTGGCACATAACACCTCATGATTCGTTGCTTTATATTAATACTTTTGATACAGGAGATCATGCTGGAATTTCGAGCCGGAATTATGTCACGGCAGGG
GACACTAGTTGTGCCAGATACTCGTAGAGGACTTGTTCGTGTAGTTAGGGGAGATGAGGGGTTGTTGCACTTTCAATGGCTTGTTCGAACAAGTAATGTGGCAGAAATTGATCATATTGTATTTCCCGATGAAGCTGTATTTGAAAAGGTCCAGGAAACCAACGAACGAGTGTACATTTTGAAATTCAAGGAGGATGATC
GCAAATTGCTCTTTTGGATGCAGGAACCCAAAGCTGACGGTGATTCACAGATATGCAGCTCTGTTAACTACTTCATTAATCGCCCAATGGAGGAAGGAGATGAGGTTGAAACTTCGGCATCTCTCCAGAAGTCAGAAACCTCAGACGTTGCTGTTGGAATTGAAGTCTCTTCTAGAGATGCAAATGCAGGGGAGCCTGTA
TCATCTAATGAAGCCTTATCTGGAGATTTAAACCCCTCTGCTGGACCTGTGCAGCTTGCAGATTTGCAGAGAGTATTGAGTAGCCTGGAAGGGAACATTTTAGTGGCACAAGATACAGGGCCAAGTTTAGGAGATCTTCTGAAGCCTGAATTAGTTCTGCCATTGCTGGAACAGTTCTCTTTGGAAGAACGACTTGCACC
CTATTTGCCAGAGGGTAACTGGACTCGTGAAGCTTTTCTAGAACTACTGCAAAGCCCTCAGTTCCGTCAACAAGTGGAGGCTTTTAGTTATGTTCTCCAGACAGGCCAAATTGATTTGTCCCAGTTTGGGATTGATCCTAGCAAGTATAATTTCACCGTGGCATCTTTTCTGGAGGCCTTGGATGATGCAGTTGCAAAGA
ACCCAGAAACAGGTGGTGCTATTGATTCTTTAGCTGCATCTGCTCCAGAAAGTAGGCAAGAGGATAATAAAGACATTGATTGTAGTTCTCAGAAACGAAGTGCTGGTACAGATTCGATGGATGAAGGTCATTAGTGCAGAGTGTATTTTTCTCTTGTTAATTCACTTGCCTTATTTCTTCACCCTTGCCTCCGATTGCTT
CTCGGAGGAAAAGTAAGATGCGGGTGGAGTCTTTGCTGTTAGATTGTTTTATTATATGTGTGTCAATATTTGTATTTAAGTATAATTGCTAATATAATTAG
>TRINITY_DN110228_c0_g1_i6 from sample A2 / Example unspliced isoform:GCCTCTCATTTGCTTCTTTATATACCCTTTTCTGGTCTGCATTACATTCTTATGATTTTGACCCCTTGATAGATGAAACATGTAGAATTGATAACTAGGCCAACTGAATTTTGGTTCCTTTTGTATGCTTTTTTAACATTGTCTTATTCATGTGCATAATGTATTTTATAATGCTTCGAGCTTGCAGAGATGCAAATGCA
GGGGAGCCTGTATCATCTAATGAAGCCTTATCTGGAGATTTAAACCCCTCTGCTGGACCTGTGCAGCTTGCAGATTTGCAGAGAGTATTGAGTAGCCTGGgtaattggctcattattgtgcagtatttcttccaaaatcaatatgtagtgtgttgtacttttttgggccatgcagttttattattatttattgtttgttt
gatgcagAAGGGAACATTTTAGTGGCACAAGATACAGGTATAATATCGAGTTTCACAAAATTTGATGTTGCTTGACTTCCTCTTAATAAATATCTTGCTTAGTAATGTGGCAAAAGTTTCCATTTTGTTGTTTTATTAAATCAAAGTTTAATTCAACAGGGCCAAGTTTAGGAGATCTTCTGAAGCCTGAATTAGTTCTG
CCATTGCTGGAACAGTTCTCTTTGGAAGAACGACTTGCACCCTATTTGCCAGAGGTTTGCCCAATAATTATGCAGTTGAATCCCCTTTCAAATGGAGTTACTTTTTCGGAGGATGATGTAGTGAATTTTTAATTTTGAGCATGTGGC