sp|Q9STS6|LBD27_ARATH ----> LOB domain-containing protein 27

Intron 1 GTACGTTCGT ... TGCAGTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	47.06	18	5.8	16
A2	57.89	8	4.8	11
A3	57.14	3	4.4	4
A4	100	0	3.8	1
A5	16.67	5	1	1
A6	52.25	53	30.8	58
A7	50.44	56	43.2	57
A8	56.63	108	52.2	141
A9	53.66	76	52.8	88
A10	37.5	45	26.8	27

>TRINITY_DN102843_c0_g1_i2 from sample A2 / Example spliced isoform

TATCCCCCTCTCACGCTCTGTTTCGTCCCTGCCCACCTTCCAAAAATCTAAGCCCAACTAATTTGAAACTGGTTTAGTTTTTGCTCAAACTTTGGAGCCACAGAAAAGGAAACGCAGGAGGAATAGTTAATAGGACAGTCTCTGACAATTGCATGGCCGTCTGAAGGGGAAAGGTGGAAAGTAAAGATTTGGGCGGGTCT
GGTCTGTCTGTCTGTCTATATATATTCTTTATGCTTTAGGGTTTGCTTTTCACTCCTCTGTAAAGAATATCACACTTTGACTCGAGACTCTACTGGATATATACACATATCATATCCTTCCAATATGACAGGTAAAGGTGGCATCGGTCAGGCCTGTGCTGCATGCAAGTATCAGAGGAGAAAATGTTCTCCAGATTGCC
CGTTGGCTCCTTATTTTCCACCGGATCAACCCAGACAATTTCTGAACGCACATAAGCTTTTTGGAGTCAGCAACATTTTGAGGATCCTCAAGCAGCTTCCCGACGACAGGCAAAAGAGCGACGCAATGAAATCTATGGTGTACCAAGCCAACGCAAGGGAGAAGGATCCTGTTCATGGCTGTTTTGGAATTATTGTTATG
CTTCAAACTCAGGTGGAGCGATTGAAAGAAGAGCTGGAACTGGTGAGGAGCCAAGTAATGTTTTTCGACCAGCAGTTCCAGAATAAGGCCGACCCATATAATGATAATAATCTACAGCAACAGCAACAGCAACAACAACAGCAACATCAGCAGCAACAGCAGCAGCAGCAACTTCAATCCCTGGGTAATGGCGCTGGATC
TGTGCCTGCCTCCTGGATTTATCCTTCTTATGTGCACTCACCTTACGTAGGCTATGAAGGACAGGGGATTTATCGCCAATGTAATATGAGGCCAAATCATAATTTGCTTGAATACGAACAAAGGCAAGATTATATCGACTCGAAAGAGGCATATGAATCTAGAGTCTTCGCTGAAAGATAGCCAGTGTTTAATGGAGCCT
GTAGCAGATCATGAGCAGCTCAAGAGTGCGGCAGCCTTGTTCACACTCACCAACTAGCACTACTAGAACATTAGACAAGTTTCCGAACTCGATCTGTCTAATAGACTTTGTAGCTAGACCGCCTTATTATCTCCAACATGAGGAAATTCATGGAGTTCCAGAAGGAATGCACATTTTTGTATGAGAGTGATCTCTTTGTT
CATATTATTCTCGGAAATTAATACTGCTTAGAAAGTTCTGAAGCTGAGCAAGTTTTTGTACAGACAAATAGAAAATGAATGGGGCTGGAACACTTACACCACCCGTTTTGCTAGAATCACTTACTCATTAACCTGTTGCTAACGAAATTTTGTGTTATGGTAATGTGACATTATTATTATGTTGAGAACGAACATATATT
TCTGTGTTTTAAAATCTTC

>TRINITY_DN102843_c0_g1_i1 from sample A2 / Example unspliced isoform:

AAAGAGGCATATGAATCTAGgtacgttcgttagtttctctgtcgaatccattttattttcatggattggagagtcacttggtctatctgtttttggaatttcaatagaataagtttttgcaaacatgtatttgcttggtttgtaacggatgcagtgcagAGTCTTCGCTGAAAGATAGCCAGTGTTTAATGGAGCCTGTA
GCAGATCATGAGCAGCTCAAGAGTGCGGCAGCCTTGTTCACACTCACCAACTAGCACTACTAGAACATTAGACAAGTTTCCGAACTCGATCTGTCTAATAGACTTTGTAGCTAGACCGCCTTATTATCTCCAACATGAGGAAATTCATGGAGTTCCAGAAGGAATGCACATTTTTGTATGAGAGTGATCTCTTTGTTCAT
ATTATTCTCGGAAATTAATACTGCTTAGAAAGTTCTGAAGCTGAGCAAGTTTTTGTACAGACAAATAGAAAATGAATGGGGCTGGAACACTTACACCACCCGTTTTGCTAGAATCACTTACTCATTAACCTGTTGCTAACGAAATTTTGTGTTATGGTAATGTGACATTATTATTATGTTGAGAACGAACATATATTTCT
GTGTTTTAAAATCTTC

Intron 2 GTACGTTCGT ... ACGGATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	37.7	19	7	16
A2	50	8	5	11
A3	66.67	2	5	3
A4	100	0	4	2
A5	16.67	5	1	1
A6	46.34	55	36	59
A7	49.09	56	49	59
A8	49.14	103	60	139
A9	49.51	77	61	90
A10	40.54	44	31	29

>TRINITY_DN110257_c0_g1_i1 from sample A1 / Example spliced isoform

CTCTGTTTCGTCCCTGCCCACCTTCCAAAAATCTAAGCCCAACTAATTTGAAACTGGTTTAGTTTTTGCTCAAACTTTGGAGCCACAGAAAAGGAAACGCAGGAGGAATAGTTAATAGGACAGTCTCTGACAATTGCATGGCCGTCTGAAGGGGAAAGGTGGAAAGTAAAGATTTGGGCGGGTCTGGTCTGTCTGTCTGT
CTATATATATTCTTTATGCTTTAGGGTTTGCTTTTCACTCCTCTGTAAAGAATATCACACTTTGACTCGAGACTCTACTGGATATATACACATATCATATCCTTCCAATATGACAGGTAAAGGTGGCATCGGTCAGGCCTGTGCTGCATGCAAGTATCAGAGGAGAAAATGTTCTCCAGATTGCCCGTTGGCTCCTTATT
TTCCACCGGATCAACCCAGACAATTTCTGAACGCACATAAGCTTTTTGGAGTCAGCAACATTTTGAGGATCCTCAAGCAGCTTCCCGACGACAGGCAAAAGAGCGACGCAATGAAATCTATGGTGTACCAAGCCAACGCAAGGGAGAAGGATCCTGTTCATGGCTGTTTTGGAATTATTGTTATGCTTCAAACTCAGGTG
GAGCGATTGAAAGAAGAGCTGGAACTGGTGAGGAGCCAAGTAATGTTTTTCGACCAGCAGTTCCAGAATAAGGCCGACCCATATAATGATAATAATCTACAGCAACAGCAACAGCAACAACAACAGCAACAACAACAGCAACAGCAACAGCAACAACAACAGCAACATCAGCAGCAACAGCAGCAGCAGCAACTTCAATC
CCTGGGTAATGGCGCTGGATCTGTGCCTGCCTCCTGGATTTATCCTTCTTATGTGCACTCACCTTACGTAGGCTATGAAGGACAGGGGATTTATCGCCAATGTAATATGAGGCCAAATCATAATTTGCTTGAATACGAACAAAGGCAAGATTATATCGACTCGAAAGAGGCATATGAATCTAGTGCAGAGTCTTCGCTGA
AAGATAGCCAGTGTTTAATGGAGCCTGTAGCAGATCATGAGCAGCTCAAGAGTGCGGCAGCCTTGTTCACACTCACCAACTAGCACTACTAGAACATTAGACAAGTTTCCGAACTCGATCTGTCTAATAGACTTTGTAGCTAGACCGCCTTATTATCTCCAACATGAGGAAATTCATGGAGTTCCAGAAGGAATGCACAT
TTTTGTATGAGAGTGATCTCTTTGTTCATATTATTCTCGGAAATTAATACTGCTTAGAAAGTTCTGAAGCTGAGCAAGTTTTTGTACAGACAAATAGAAAATGAATGGGGCTGGAACACTTACACCACCCGTTTTGCTAGAATCACT

>TRINITY_DN110257_c0_g1_i2 from sample A1 / Example unspliced isoform:

CTCTGTTTCGTCCCTGCCCACCTTCCAAAAATCTAAGCCCAACTAATTTGAAACTGGTTTAGTTTTTGCTCAAACTTTGGAGCCACAGAAAAGGAAACGCAGGAGGAATAGTTAATAGGACAGTCTCTGACAATTGCATGGCCGTCTGAAGGGGAAAGGTGGAAAGTAAAGATTTGGGCGGGTCTGGTCTGTCTGTCTGT
CTATATATATTCTTTATGCTTTAGGGTTTGCTTTTCACTCCTCTGTAAAGAATATCACACTTTGACTCGAGACTCTACTGGATATATACACATATCATATCCTTCCAATATGACAGGTAAAGGTGGCATCGGTCAGGCCTGTGCTGCATGCAAGTATCAGAGGAGAAAATGTTCTCCAGATTGCCCGTTGGCTCCTTATT
TTCCACCGGATCAACCCAGACAATTTCTGAACGCACATAAGCTTTTTGGAGTCAGCAACATTTTGAGGATCCTCAAGCAGCTTCCCGACGACAGGCAAAAGAGCGACGCAATGAAATCTATGGTGTACCAAGCCAACGCAAGGGAGAAGGATCCTGTTCATGGCTGTTTTGGAATTATTGTTATGCTTCAAACTCAGGTG
GAGCGATTGAAAGAAGAGCTGGAACTGGTGAGGAGCCAAGTAATGTTTTTCGACCAGCAGTTCCAGAATAAGGCCGACCCATATAATGATAATAATCTACAGCAACAGCAACAGCAACAACAACAGCAACAACAACAGCAACAGCAACAGCAACAACAACAGCAACATCAGCAGCAACAGCAGCAGCAGCAACTTCAATC
CCTGGGTAATGGCGCTGGATCTGTGCCTGCCTCCTGGATTTATCCTTCTTATGTGCACTCACCTTACGTAGGCTATGAAGGACAGGGGATTTATCGCCAATGTAATATGAGGCCAAATCATAATTTGCTTGAATACGAACAAAGGCAAGATTATATCGACTCGAAAGAGGCATATGAATCTAGgtacgttcgttagtttc
tctgtcgaatccattttattttcatggattggagagtcacttggtctatctgtttttggaatttcaatagaataagtttttgcaaacatgtatttgcttggtttgtaacggatgcagTGCAGAGTCTTCGCTGAAAGATAGCCAGTGTTTAATGGAGCCTGTAGCAGATCATGAGCAGCTCAAGAGTGCGGCAGCCTTGT
TCACACTCACCAACTAGCACTACTAGAACATTAGACAAGTTTCCGAACTCGATCTGTCTAATAGACTTTGTAGCTAGACCGCCTTATTATCTCCAACATGAGGAAATTCATGGAGTTCCAGAAGGAATGCACATTTTTGTATGAGAGTGATCTCTTTGTTCATATTATTCTCGGAAATTAATACTGCTTAGAAAGTTCTG
AAGCTGAGCAAGTTTTTGTACAGACAAATAGAAAATGAATGGGGCTGGAACACTTACACCACCCGTTTTGCTAGAATCACT