sp|Q84MB6|DIOX2_ARATH ----> Probable 2-oxoglutarate-dependent dioxygenase At3g50210

Intron 1 GTATGTAAGA ... CCTTTGGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	18.07	34	12	3
A2	18.31	29	12	1
A3	25	15	9	1
A4	14.29	12	1	3
A5	40	3	1	3
A6	20.3	108	47	8
A7	22.38	111	37	27
A8	19.59	197	47	49
A9	21.56	131	43	29
A10	23.44	98	42	18

>TRINITY_DN1027_c0_g1_i1 from sample A7 / Example spliced isoform

GGACTAGATTGCGCACGGCTGTAGTTGATACTGCTGATAATTAAATTGCATTGCGGTCGTACTGGTCAATAAAGCATCATCCCCGCTATTCTTTAGCGAGGATATCTGCGATAGAATTCCATATTCTGATTTAATTCCCATTTCCATTTGGCTACTTCTGGTTGTATAGCCATGCTTAATCCAGTAGCAATATCCCTCCC
TCGCATAGATTTGTCAAGTCCCGACCTGCAAAAATTGGCTTCTCTTGTTAAACAGGCATCTCTGGATTCTGGGTTCTTCTACGTGATAAATCATGGCATCAGTGAAGAATTCCAGGAGACAGTATTCAGACAGAGCAGGACATTTTTTGGGCTGCCTAAGGAGGAAAAGATCAAGGTGCTGAGGAACGAAAAACACAGAG
GCTATACTCCCTTCCAAGACGAGACTCTGGACCCAGATAAACAAACCGAAGGGGACTGTAAGGAGGGGTTTTATATTGGAGTTGAGGTGGCTGAGGATGATCCTCAAGCATCAAAGGAATTTTATGGACCTAACATTTGGCCTTCTACAGATTTGCTGCCTGGATGGAGGAAGGTTATGGAGAAATACCACCAAGAGGCT
TTAGAAGTTGCAAGAAAGGTAGCTAAGTTGATAGCTTTGGCACTGGACTTGGATGTGGATTTCTTCAACAAACCGGGAATGCTTGACAAACCCATTGCCGTTCTGCGCCTGCTGCATTATGAAGGCAAAGCATCTAATCCAGAGCTGGGCATATATGGTGCTGGAGCACATTCTGATTATGGGTTGATCACATTGCTAGC
AACAGATGCTGTGGCAGGACTCCAAATCTGCAAGAATAAGGATGCTTGCCCACAGATATGGGAAGATGTGCCTGCTTTGAAAGGGGGATTTATAGTTAATCTTGGTGACATGCTTGAACGATGGAGCAATGGCATTTTCAAGTCAACTTTGCATAGAGTTTTCATATCAAGTCAAGAGCGCTACTCGATAGCATATTTCC
TGGAACCCAGCCATGACTGCATTGTGGAGTGTCTTCCAACTTGTTATTCAGAGACAAATCCTCCCAAGTACCCTCCAGTTAAATGTGAGGATTATCTATCCAAACGGTATAAGGATACTCATAGTGACCTAAGTACATATACAAAGATTTCTGAATCGTGCCAGAGAGAGGACAGTCACACCTTAAACGGTGTACATGTT
TGATTCTCTGTTAAACAGGAAGCAACAAGGATCTTCCCAGATTATCTTATCAAGGCAGACTTCTGATTAATCAGCATGAAGAATATATTCTTGGCCAGCAGGATGACATGCCAATCTAGATGGAAAGCCCAATATTTAGTACTGCATTAATTTGTTACAATGGCTTGATTGATATGTAACCACAGTAAGCATAAACAAGC
CATTTTCAATGTATAAAACACAAAAAATTCATGGTTCAAATCCTCTTTAGTGCATTATGCAACATGTTTCATCTAGAACACTTTGCGATAGGAAAAATATCTTGTTCTCTTTTTAACACACAGGAAACTCGAGTCTACCAGCAATCTGACAAAATCATAACATTCTTTGCAACATTTATTCTTAATGTATCTCCAGTTGG
TTCAATCTGCCAGAATAAATTAATAAAAGCTACACGTATCCAGTTTCATTTGGAATCTGAAGGTCCATATGGGAGCATTTCATCCATGCCTGAAAGGTAAGTGGGGAAACTGAATGATGAATCTGATTATGTGTTCATATTTTCCAAGGTTTTTTTTATTTTCAACTATACTACTAAAGATCTTATTTCTCTTCCCAATG
TTGGCTGAAAAGCATGACTTTTGTAATGATATGTGAATTTAGATATTTAAATGCTCAAATCCTAT

>TRINITY_DN1027_c0_g1_i2 from sample A7 / Example unspliced isoform:

GGACTAGATTGCGCACGGCTGTAGTTGATACTGCTGATAATTAAATTGCATTGCGGTCGTACTGGTCAATAAAGCATCATCCCCGCTATTCTTTAGCGAGGATATCTGCGATAGAATTCCATATTCTGATTTAATTCCCATTTCCATTTGGCTACTTCTGGTTGTATAGCCATGCTTAATCCAGTAGCAATATCCCTCCC
TCGCATAGATTTGTCAAGTCCCGACCTGCAAAAATTGGCTTCTCTTGTTAAACAGGCATCTCTGGATTCTGGGTTCTTCTACGTGATAAATCATGGCATCAGTGAAGAATTCCAGGAGACAGTATTCAGACAGAGCAGGACATTTTTTGGGCTGCCTAAGGAGGAAAAGATCAAGGTGCTGAGGAACGAAAAACACAGAG
GCTATACTCCCTTCCAAGACGAGACTCTGGACCCAGATAAACAAACCGAAGGGGACTGTAAGGAGGGGTTTTATATTGGAGTTGAGGTGGCTGAGGATGATCCTCAAGCATCAAAGGAATTTTATGGACCTAACATTTGGCCTTCTACAGATTTGCTGCCTGGATGGAGGAAGGTTATGGAGAAATACCACCAAGAGGCT
TTAGAAGTTGCAAGAAAGGTAGCTAAGTTGATAGCTTTGGCACTGGACTTGGATGTGGATTTCTTCAACAAACCGGGAATGCTTGACAAACCCATTGCCGTTCTGCGCCTGCTGCATTATGAAGGCAAAGCATCTAATCCAGAGCTGGGCATATATGGTGCTGGAGCACATTCTGATTATGGGTTGATCACATTGCTAGC
AACAGATGCTGTGGCAGGACTCCAAATCTGCAAGAATAAGGATGCTTGCCCACAGATATGGGAAGATGTGCCTGCTTTGAAAGGGGGATTTATAGTTAATCTTGGTGACATGCTTGAACGATGGAGCAATGGCATTTTCAAGTCAACTTTGCATAGAGTTTTCATATCAAGTCAAGAGCGCTACTCGATAGCATATTTCC
TGGAACCCAGCCATGACTGCATTGTGGAGTGTCTTCCAACTTGTTATTCAGAGACAAATCCTCCCAAgtatgtaagagaatattatagtttaactgagtggggagttctaaaaggcccctttctgaggattgaatatcaatttaaatgaaagtttattgacaattgcattcctagaaacattggatacaatggacaatta
aaagtattgttgtgatgaatacctttggcagGTACCCTCCAGTTAAATGTGAGGATTATCTATCCAAACGGTATAAGGATACTCATAGTGACCTAAGTACATATACAAAGATTTCTGAATCGTGCCAGAGAGAGGACAGTCACACCTTAAACGGTGTACATGTTTGATTCTCTGTTAAACAGGAAGCAACAAGGATCTTC
CCAGATTATCTTATCAAGGCAGACTTCTGATTAATCAGCATGAAGAATATATTCTTGGCCAGCAGGATGACATGCCAATCTAGATGGAAAGCCCAATATTTAGTACTGCATTAATTTGTTACAATGGCTTGATTGATATGTAACCACAGTAAGCATAAACAAGCCATTTTCAATGTATAAAACACAAAAAATTCATGGTT
CAAATCCTCTTTAGTGCATTATGCAACATGTTTCATCTAGAACACTTTGCGATAGGAAAAATATCTTGTTCTCTTTTTAACACACAGGAAACTCGAGTCTACCAGCAATCTGACAAAATCATAACATTCTTTGCAACATTTATTCTTAATGTATCTCCAGTTGGTTCAATCTGCCAGAATAAATTAATAAAAGCTACACG
TATCCAGTTTCATTTGGAATCTGAAGGTCCATATGGGAGCATTTCATCCATGCCTGAAAGGTAAGTGGGGAAACTGAATGATGAATCTGATTATGTGTTCATATTTTCCAAGGTTTTTTTTATTTTCAACTATACTACTAAAGATCTTATTTCTCTTCCCAATGTTGGCTGAAAAGCATGACTTTTGTAATGATATGTGA
ATTTAGATATTTAAATGCTCAAATCCTAT