NA ----> NA
Intron 1 GTTGGGTTCA ... TCTGAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 65.5 | 29.5 | 73 | 39 |
| A2 | 61.33 | 29 | 60 | 32 |
| A3 | 55.04 | 29 | 44 | 27 |
| A4 | 63.78 | 23 | 50 | 31 |
| A5 | 64.38 | 13 | 25 | 22 |
| A6 | 63.64 | 2 | 3 | 4 |
| A7 | 53.47 | 23.5 | 25 | 29 |
| A8 | 57.58 | 14 | 24 | 14 |
| A9 | 46.03 | 17 | 16 | 13 |
| A10 | 50.52 | 25 | 27 | 24 |
>TRINITY_DN126732_c0_g1_i3 from sample A1 / Example spliced isoformTGGTTGTGCTAATCCATGCCTTTGAAGTTATGAAAATAATTTATCGAATGGATCCATGCTCACACTTCAACCACAATCTTTACTTTCGCAAGGTGTTTATGCAACCTTTATCAAAGGCTTAGAGGAAGACATTTGACTGGTTATGTCGTAGGCCATCGCTTACGGCCAATCATGAAGACTCATTTCACTCAATCCTTAGT
CATGCTCTTCAAGAACGCTTGTGGGCGGTCACGAATATAAATATATTTTTGTGTCTTCCCACTTTGATCATGGACATTGACAGGGCAGGATCAGCTCCATCCCATCTTTTTGAAAAGGACAACAGCAAATGCAGTTGATGTGCGTGTTCTTTTCTATGCTAAACACAAATTATATTGGACGAATCTTCCGAGAGAGTAGA
AGAATTCAGCCATTGGAGTTCTCAAAAATCATAAATCGTCCTTTGTAATGTTTGCAAATTTGTGTATTTGTACGGGCAGATTGGTATTGAATTCGAGAAGCAGCTAAAACAGGGCTTGGGAAGCTGGATTGCGGACGAGGAAGCTTCGTTTGATGGAGTATCCATATTCATTAAATCTGAGTTGGGTTCATTCAAGATCA
CATAAACCTGAATTGGGTTTCTTCGAAGGTGGTTCTAGGGATTGGATTTGAGCTTGGAGGTCGTTTTCTTGAATATAGGGCTTCTATCAAAGTGGGTTTCAACCATTCAACCCATCGAGGCTCGTTTACAGGGTCAATTCGGGTTCGATCAATATATTTTGGCCATTGAATTAAAGCCCACAAGGGATTTCTTCTGACGT
TGCATTAGGGCTCTGTAGCATTTCTTTGGGTCAGCAGTGGTCTTGGTTACTGAGGTGGGTTGGGCCCACAAGGGATTTCTTCTGACTTTGCATTAGGGCTCTGTAGCATTTCTTTGGGTCAGTTGGTTACTGAGGTGGGTTGGGCCCACAAGGGATTTCTTCTGACGTTGCATTAGGGCTCTGTAGCATT
>TRINITY_DN126732_c0_g1_i1 from sample A1 / Example unspliced isoform:TGGTTGTGCTAATCCATGCCTTTGAAGTTATGAAAATAATTTATCGAATGGATCCATGCTCACACTTCAACCACAATCTTTACTTTCGCAAGGTGTTTATGCAACCTTTATCAAAGGCTTAGAGGAAGACATTTGACTGGTTATGTCGTAGGCCATCGCTTACGGCCAATCATGAAGACTCATTTCACTCAATCCTTAGT
CATGCTCTTCAAGAACGCTTGTGGGCGGTCACGAATATAAATATATTTTTGTGTCTTCCCACTTTGATCATGGACATTGACAGGGCAGGATCAGCTCCATCCCATCTTTTTGAAAAGGACAACAGCAAATGCAGTTGATGTGCGTGTTCTTTTCTATGCTAAACACAAATTATATTGGACGAATCTTCCGAGAGAGTAGA
AGAATTCAGCCATTGGAGTTCTCAAAAATCATAAATCGTCCTTTGTAATGTTTGCAAATTTGTGTATTTGTACGGGCAGATTGGTATTGAATTCGAGAAGCAGCTAAAACAGGGCTTGGGAAGCTGGATTGCGGACGAGGAAGCTTCGTTTGATGGAGTATCCATATTCATTAAATCTGAGTTGGGTTCATTCAAGATCA
CATAAACCTGAATTGGGTTTCTTCGAAGGTGGTTCTAGGGATTGGATTTGAGCTTGGAGGTCGTTTTCTTGAATATAGGGCTTCTATCAAAGTGGGTTTCAACCATTCAACCCATCGAGGCTCGTTTACAGgttgggttcatatgctgccctcattttcaacttgagcccttttgcatcggattagatattgaattttag
ttcactgttcatttgggttgtggtgttgttttcgcttctgaattagGGTCAATTCGGGTTCGATCAATATATTTTGGCCATTGAATTAAAGCCCACAAGGGATTTCTTCTGACGTTGCATTAGGGCTCTGTAGCATTTCTTTGGGTCAGCAGTGGTCTTGGTTACTGAGGTGGGTTGGGCCCACAAGGGATTTCTTCTGA
CTTTGCATTAGGGCTCTGTAGCATTTCTCTGGGTCAGCAGTGGTCTTGGTTACTGAGGTGGGTTGGGCCCACAAGGGATTTCTTCTGACGTTGCATTAGGGCTCTGTAGCATTTTTCCTTTTTATTGCTGCCCAACTGGGTTTTGTGAAAAGAGGGTTTGAAAATGGGATTTCAGTCATTGAATTGGTGAAAAAGTGAGT
TCGAAAGTGGGATTGTAGGCATTGAATACATGAAAAAAGAGGGCTTGAAATTGGGACTGTAGTCAATGAATTGGTGAGCAAAGAGGGTTTGAACGTGGGATTCTAGTTATGGAATTGGTGAAAATAAACATAGAGGAGGACAGATTGCCTGTAATTTTTTCAGCATCGGAAGAGCACGGAGGGCCTTCGTCGCTTTCCGG
GGAGCCTCTGATTTCGAGCCTAGCTGCAAAACGCCATAAAAAGCTAATGTCTGCTGCCCACATGAAGCGAAAGAAATGGACCGAAGAGGAGGAAGAAACTCTCATAAACAAATATGGAGAGCTGCTTAGATCTGGTGTTTTGGCGAAGCTCAAAACAAGGGAGAGGAAATTTGAGCCCATTGCAGATTATGTGAACGCGG
TGCACCACGCCCAGGATCCTGTTGCTTTTCCCTGGGAATGGACATGGAGAGATGCTTCAACAAAAGTGCAGAATATGAGGCATCAGTATCTTGGTGTCAAGCAGAAAATTCGAAAAAATGTTGATCAACTAGGAAATGGGGACCAAGAGGAATATGACTGGGCTGAAGGTGTTACACACTGGCTTAATTTTCTCAAATAC
AAGGAAGTTTTTGGAGATGTTGAGCTTGACATAAATGAACTGGAGTCCAGAGGGAACGTTCATGCCGGTGGCAACATGAAAAATGGTGTTGGAAAAGGAAGGATATGGTATGGGTTTCGAGGCAAAAATCAGAACTGTGCAAGAGATGGAGGTATTCCAGGCATAATTGACGGTGATACAGGTTCACCATTTGGCATGTG
CTCTTATGGGGATGGAAGAATCGGGCAGGAAGGCGAAAATGGCTCTGGTATGTTAGGGCTAGGTATTGGGGGACTCGAGTATGATGAAGGAGAAGGGGAAGATGGCGGTGAGGGTGAAAGTGGCGAAGATGATGGAGAGAAAGAAGATGATGATGGTTTGGTTCAGAGGAACAGAAAAAGGAAGAAGAAAGGAGACAAAG
CATTGGTTTACGAGGCCCGAATTTTGGGATTTTTGGGATCCCAGTTTGCAGAGTTAAGGGATCATGAAATGAGACGAGAGGAGAAAGAGAGACGAAAGGAAATGGAGATGGAAGAAAGGGTGATGTTAAGGGAGGAAGCAGACAGGGAGAAAGAGCGGGAGAGGGAAGAGCGACAGAGGGAAAGGGAGGATAGGGAAAGA
ATCCGAGAGAAAGAGAGAGAAGAAATGGAGAGAGTGAGAGCTGAGAGAGAATGGGAAAGGGATCTGAGGGAGCATGAACGATGGCAAGAAGAAAGGGAGAGATGGAGATCGCTGGAAGAAAAGAGGGAGAGAGTGGAAATGGAATGGATGGAAAGCATGTTGAACTTGCAAATTGAGCACCAGACACAAATGATGCAGTT
ACAAGCACAACTAGCACAAGGTCAACAACAAATTTCTGCTCTCTTGCTTGGCCTTATTGGACAAATATCAGGTCAGGGGGGTGACATAACTGGCCAAGGGGTCTCTCTTAATCCTGTTATAGCTCAGGTTTTACAGAGCATGCAGCAGCCAGTAGTTAGTCTTGTTCCTAACGGTGACAGGAGAGGAGCAAGTAATGATA
GTCAGTTCATCGTGGATGAATAATGTAAGGCAGTTTCTTCTGGTTGGATAACATGGGGTTATCTGGATTGCTATGAAATAGGTACAGATATGCATCCAAATGTACGTGCACAGAAACCATTCATGCAGAGGAACGCAATTATCTTGCTGGCAAGTTGAGCCATCATTGGCTCGATACATGTTTCAATGTGCATGAGACAA
CACAATATGACATATCATTTTTCCATGGCCATTCCACATTACAGGGCATGAAGTGGAATTTTTAATTTGAGTCTCTTGTCAGGGCGACAGTAGGTTGATCTCGATCAATTCTTTTGTAGCAGATCTCCACCTCTTTATTATTCTACTGGAGACATTTAACAGCAATGGAGCTCGATTAACTTTCAGGAAGCTTGGTGAGG
CAATATCTTCCACCATTCTGAAATTAAATTAAATATATTTTTCTGCAGTTGTACAATATATGTGCATATAATGAACGAGCACAAAGAAATATAGGAACTTGATTTATGGTGAATGCATTGATGCTATGAAGCCAGTATACTCAGTTTGAAAAATTCTTGGAAAAGAAGAGAAGCTTGTATTCATTGCTTAGAGAATTCAA
GAGACAAATTATATTCGAAATTTAATGCTTTGTTCTGTTATCGCTCACTCATGGCAAATAGAGACCAACTCATGGCAAATAGAGACCACCTCTTGGTAAAGTTTATTCAAGTGGCTGGTGATATAGGCATTTATGTAGTCAAAGTTCTATTGAAAGTCACCATTTTGAGCTCAGGCAGAGGTCAGATTGCTGTTTTGAAA
TAGGAACAATGTAAAACTCTGTTATTGAAATTTGAAATGACCAACCATATTTATTATTGGTCTTGGATCATAAATGTCTCATCATTCTTTTGGCAATTTTGGATCGGTCTTTCTTGAATGATTGTGAATTTGGAGGTGTTAATATTTGATCCTTCTTGGATGTATTTAATATCATACAGGACCATTGTAATTTGATGAAA
TATTTATTTAGTAGTTTTGGAGATCAGGTTTGTGGATTGAGCA