NA ----> NA
Intron 1 GTAAAAAATG ... TTTATAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.16 | 7 | 12 | 12 |
| A2 | 100 | 0 | 6 | 6 |
| A3 | 67.57 | 6 | 14 | 11 |
| A4 | 56.76 | 8 | 12 | 9 |
| A5 | 100 | 0 | 4 | 5 |
| A6 | 9.09 | 5 | 1 | 0 |
| A7 | 0 | 4 | 0 | 0 |
| A8 | 0 | 6 | 0 | 0 |
| A9 | 0 | 1 | 0 | 0 |
| A10 | 14.29 | 3 | 0 | 1 |
>TRINITY_DN110133_c0_g1_i2 from sample A3 / Example spliced isoformCTCAAACTGATGAAGTTGATACAAAACATTGAAAATGATATTTTGGGGCATATTGTTTGTGGTCAAAGCAAAAAGAAAAAAAATCAAATCAAAGGATCAGCCAGATGAAATGACCTATATTGGAATATGTGGAGAAGAGTATTTTATTTGCTATCAAAGTTGACATTTTAATTGAAGGAGGCTAATCATTCTAGTTTTTC
GATCTTTTCTGGTTTGCTATTCACCTGAATCCGGTCAAACAATTTTTGCCAAAATTGCAATTTTGGATTTGATGAAATAGCAGTTTTTAATGCAGAAATTGATTTAGTGCCCTTGAATACCCCTATTGCAACAGGATTGTGGAATGTTAAAATCTGATATCTGCAATTCCATCAATCCAAAATGAATCTTGTCAGATTTA
GATTATCGTGATGCACTTCGGAAGAAAATAGTATACCAAGGGGGAGTGGGGAGGTGGTTGAAGATTTTTTTTATCAAGGATCTTTTTTTTCTACTGCACGGTGAATGAAACAGCCGGGCAGTCACATCATTGGCATTTAGCATGGATGGAGTTCTGTTAGTTTCTGGGTCTGAAGACTGCC
>TRINITY_DN110133_c0_g1_i5 from sample A3 / Example unspliced isoform:ATATGCACGTGAAAATTTGAAGCCAAAAATCACAAAAAGAAATTGCAAAGGTCGCCCAACATTGAATGGCCAATGTGAATTAAATACGTAACATATAACTGCGATGAGAAAAACCAAAATGAATATCTTCTAGTAATGAGATATTGGTGGGCAACTCAAACTGATGAAGTTGATACAAAACATTGAAAATGATATTTTGG
GGCATATTGTTTGTGGTCAAAGCAAAAAGAAAAAAAATCAAATCAAAGGATCAGCCAGATGAAATGACCTATATTGGAATATGTGGAGAAGAGTATTTTATTTGCTATCAAAGTTGACATTTTAATTGAAGGAGGCTAATCATTCTAGTTTTTCGATCTTTTCTGGTTTGCTATTCACCTGAATCCGGTCAAACAATTTT
TGCCAAAATTGCAATTTTGGATTTGATGAAATAGCAGTTTTTAATGCAGAAATTGATTTAGTGCCCTTGAATACCCCTATTGCAACAGGATTGTGGAATGTTAAAATCTGATATCTGCAATTCCATCAATCCAAAATGAATCTTGTCAGATTTAGgtaaaaaatgtcagtttcctttcctgttattttgagtgactggaa
aaggactaattcttagcacgtttaaactttagactatggattttttatttcccaaatgctataaggagataatagttgctctttatagcagATTATCGTGATGCACTTTGCAATAAAATAGTATACCAAGGGGGAGTGGGGAGGTGGTTGAAGATTTTTTTTTATCAAGGATCTTTTTTTTCTACTGCACGGTGAAGGAA
ACAGGTGCCTTGCTAGACATACAGAATTTACATGCTGTTATGCTTTTCCTTCTATTGTTAATGCACATGTTTAGTAGTTCATTAGTTTATATTTTCTTTGACATTGTAATCTGGCATATACAGCGGTCAACTGCAGAGTTTTTAAGTAGTGAAACTAGAAAAGATATGTCGAAAGCCAATACTAGAGCCATAGAATGCAG
TAAAACTTGGCAATAATTTAGAATCTTAAACAGGTTGAATATTATGGAGATTTCATAAATTAACGTGAGTCAAGCACTCACTGCTTAAAACAAGGGATCTG