sp|Q8H2D5|POLH_ARATH ----> DNA polymerase eta
Intron 1 GTAGAAGAGA ... TTATTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70 | 6 | 5 | 14 |
| A2 | 54.8 | 19 | 6 | 23 |
| A3 | 63.16 | 14 | 7 | 24 |
| A4 | 71.43 | 6 | 4 | 15 |
| A5 | 57.14 | 6 | 3 | 8 |
| A6 | 40 | 3 | 0 | 2 |
| A7 | 73.33 | 4 | 6 | 11 |
| A8 | 72.73 | 3 | 3 | 8 |
| A9 | 70.83 | 7 | 4 | 17 |
| A10 | 66.67 | 7 | 2 | 14 |
>TRINITY_DN39390_c0_g1_i2 from sample A7 / Example spliced isoformAGAGCGGCTCAGTGGAGCTATTAACTTCAATCATAGCGAGGGAAGGTGAAGGGTGTTCAGAGCTTGCATATTATAAAGAAGGTACAGAATCGGCTGCAGCCACTGCCAAGGAAGTATGAAAACTGGTTCCGCCCCACACCTGGAATGCAATCGGGTCATTGCCCACTTTGATGTGGATTGTTTTTATGCACAGGCTGAAA
TATTGAGACAACCTCAGTTGAGAGATCGACCAGTTGGAATTACACAGAAGTTCTTAGTTGTCACATGCAACTATGTGGCTCGTCAATGTGGCGTGCCAAAGATGGTGTCAATTGAAGAAGCAAGGAGGAGGTGTCCTGATATAGTCTTGATCAATGGGGAAGATCTTACACCATACAGAGCAGCCAGCAAAAGGATAATG
AATGTGCTCAGGCGGTTTGGCACACTTGAGAGGTCAGGATTGGACGAATGTGGATTAGATATCACATCTGAGACCATAAAACGTGCTGCATTAGGGGCGGTTCAGAACAGCTTCATAGGTTTTGTAATTGACAGCAATTCAGCAAGTGGACTAGTGAAGGAGGGTTTTGCAGAAGCTAGAGTCATTCTAAATGGAAGTAA
CTTCAGAGACACGAGTCCATGTCCAGTTTCTGAAAAAAGTTGTGAAGAGAGTAATGCTTCTGCAAGTAAGATCACTTTTGGAATTGGAAATGAGTTGAAGAGTGTTTATTCTGAAGACAGAGATTTGATTATGATTGGAAGTCATTTAGTAGCTGAAATCCGTGAAGCTGTGGAAAAAGAGACAGGGTTTCAGTGTTCTT
GTGGAATCTCCTACAATAAGATGCTTTCAAAATTGGCATGTTCAGTTAATAAGCCTAATAAACAGACATGCCTTCTTAAGTCAGCTGTGCCTGGATTTCTTTGCCCGCTTCCAGTTCGTAAGATTCCTGGTGTTGGGCATCGAACAGAATCCATGCTAAAGGAAATTGGAGTTCAGACAGTGGCTGATCTTCAAGTGTGC
ACTCGGGAACAGCTACTGAAAATGTTTGGCGAGAGAATAGGCTGTTTCCTATTCAATGCATGCAGGGGAGTTGACCTAACACCTGTTATGGACAAAGGACTGCCAAAGTCTCTATCTGTTGAAGATTCCTTCCCTCCATGTACGACTTTGAAAAGCATAGAGGCTGTGTTATCATCGTTGGCATTGGACTTGATGGCTAG
GTTGGATGAAGACAAATTTGAAACTGGACGAAGGCCACATTTATTTACACTCAAATGGAGACAAAAGGGTAGCTGGAATTTCACCAGTGCTTCAACTCAAATGCCATCAGAGTTGCTATCAACTAAATGTCCTTTGGACAGACGAAAGGAGATATTAGTCCAAACAGGGATGAGCCTTATATCCCGCAGCCTCAGGGGGC
GCTCTTTTTCAGTTGTTGTGATAAACGCTGGTGCAACAAATTTTACCGATTCTTGTACAGGCAGTTTGAGTGCCTCACAAGACATACGCTCTTTACTACAAAAATCCAATAAACTTCAGGAAAGTAATACTGTTCTTGGCAGGCAAGAAATAGTCATGTACTCTGGGCAGGTTGAAGAAACTGAGGAATCAAGACTTAGG
CACGTCTATCCACCGTTGCTTGACCAGAGACCCGATCACCATTTTGCGCGATCTTCCTCATCTGCTGACATGAAGTGCGGCATTTCTTTGGAGTTGCACAGTTATAGTAAGGAACAGTACGAGGGGAACAAAATGACAGAGTTGAATACAACCTGGCAAGATTGCAATGATGACATTTGCAGACTTCCATCCATGGCATC
CTCAAGTTGTGTTGAAAATTGTGACTTTCAAACTTGTGCCTTGAACTCTGATACTTGTAGAGAATCAGTTTCATTTTCGTCTAAGAAAAACTTGATAGAGGAGCACTCTAGAGAGGGGGTGCTTTCATTTTCTTGTGAACTCGAAAAACAATGCGTTCCGACAGAAATAATCCATGTATCAAAGACTAAAGTCCAAGGAA
GTGGAGTGCAGTTTTTGGCTGAACAAATTGAAATTGAAGCACATCTGACTGAGAATGCGCAGTGTAGTTCAGAAGATATTTATTTTGATGGGAATAATGGGAAACAGGGAGATACAATCATTGCTCACAACTCAGTTTACACAAAAAGAGGACATGACATGCACGAGAATGATGTGGAGGAATCTTTTATTTGTGAGAAA
TGTGGACAGAAATTCAGTTGTGATGAGCAAAACAGGCAGGAACATGAAGATTACCATTATGCACTAGAGCTGCAGTCAAAAGAAACAAATCAAACAACTACATCACTGAATTATTGCAGGAATAGAAGCAACCATTTGGTTGGCCAATCTTCTTCAAAGAAAAAGAAGAAAAATCAGTGTGTCACTCTAGATTCATTTTT
TTCTAGGTCAAAGTAATATTATCTGAATCAAATCTAAGAAACTTTATCAGGGCCCTTTAGTGCTTCTTGGGTTCACATTTGGAGTACGAAAGGTTGTCTATAATGCAATTATCATTAAAGCAGGACATTATCACTTTTGATGATTCTGCCAGTGGCTTAGTATGCTTCATCAACCGAGGTAGCAGCTCGATAACTTATCT
TGTTCCATATTTCTCAACCATATTAACCCCACTCTAGTAAAATTTCAAAAGCAAGATTTCTAATTTCAGTCCATCATGGTCGGTACAAAATGAGCAACTCAGGCCAGGAAGCCAGTCTGGATCACAAGTTTGTTTTGGCTTCATTGGGCTTTCTTTATCATCAGGCTTAGTCTTGGTTGGGATTTAATACATAGTTGGAT
GGTTTTGTAAATTATCTGTATTTCTATTATTGTAAATTCTCATCCACCTATCAACGAGTATAAGCCCGCATTCTTTTTTGTCATATTTTCCTTTAAACAATGAATAACCAGATAGATACATAGTTAAAATTTAAGAGAAATGTTCTCACATTACCTCGCTCTCATTTTCTAAATTTATTAGGACACATGTTTCTACAGTC
CGCTTTGATAAATTCTTAGGTAATCAATAATATCCTTACGTGAAAGTTACCATCTTGG
>TRINITY_DN39390_c0_g1_i3 from sample A7 / Example unspliced isoform:AGAGCGGCTCAGTGGAGCTATTAACTTCAATCATAGCGAGgtagaagagatctgcgaaccatgagtgtttatatatatgacttggcgggaaatttctaagctttaattattttcagGGAAGGTGAAGGGTGTTCAGAGCTTGCATATTATAAAGAAGGTACAGAATCGGCTGCAGCCACTGCCAAGGAAGTATGAAAACT
GGTTCCGCCCCACACCTGGAATGCAATCGGGTCATTGCCCACTTTGATGTGGATTGTTTTTATGCACAGGCTGAAATATTGAGACAACCTCAGTTGAGAGATCGACCAGTTGGAATTACACAGAAGTTCTTAGTTGTCACATGCAACTATGTGGCTCGTCAATGTGGCGTGCCAAAGATGGTGTCAATTGAAGAAGCAAG
GAGGAGGTGTCCTGATATAGTCTTGATCAATGGGGAAGATCTTACACCATACAGAGCAGCCAGCAAAAGGATAATGAATGTGCTCAGGCGGTTTGGCACACTTGAGAGGTCAGGATTGGACGAATGTGGATTAGATATCACATCTGAGACCATAAAACGTGCTGCATTAGGGGCGGTTCAGAACAGCTTCATAGGTTTTG
TAATTGACAGCAATTCAGCAAGTGGACTAGTGAAGGAGGGTTTTGCAGAAGCTAGAGTCATTCTAAATGGAAGTAACTTCAGAGACACGAGTCCATGTCCAGTTTCTGAAAAAAGTTGTGAAGAGAGTAATGCTTCTGCAAGTAAGATCACTTTTGGAATTGGAAATGAGTTGAAGAGTGTTTATTCTGAAGACAGAGAT
TTGATTATGATTGGAAGTCATTTAGTAGCTGAAATCCGTGAAGCTGTGGAAAAAGAGACAGGGTTTCAGTGTTCTTGTGGAATCTCCTACAATAAGATGCTTTCAAAATTGGCATGTTCAGTTAATAAGCCTAATAAACAGACATGCCTTCTTAAGTCAGCTGTGCCTGGATTTCTTTGCCCGCTTCCAGTTCGTAAGAT
TCCTGGTGTTGGGCATCGAACAGAATCCATGCTAAAGGAAATTGGAGTTCAGACAGTGGCTGATCTTCAAGTGTGCACTCGGGAACAGCTACTGAAAATGTTTGGCGAGAGAATAGGCTGTTTCCTATTCAATGCATGCAGGGGAGTTGACCTAACACCTGTTATGGACAAAGGACTGCCAAAGTCTCTATCTGTTGAAG
ATTCCTTCCCTCCATGTACGACTTTGAAAAGCATAGAGGCTGTGTTATCATCGTTGGCATTGGACTTGATGGCTAGGTTGGATGAAGACAAATTTGAAACTGGACGAAGGCCACATTTATTTACACTCAAATGGAGACAAAAGGGTAGCTGGAATTTCACCAGTGCTTCAACTCAAATGCCATCAGAGTTGCTATCAACT
AAATGTCCTTTGGACAGACGAAAGGAGATATTAGTCCAAACAGGGATGAGCCTTATATCCCGCAGCCTCAGGGGGCGCTCTTTTTCAGTTGTTGTGATAAACGCTGGTGCAACAAATTTTACCGATTCTTGTACAGGCAGTTTGAGTGCCTCACAAGACATACGCTCTTTACTACAAAAATCCAATAAACTTCAGGAAAG
TAATACTGTTCTTGGCAGGCAAGAAATAGTCATGTACTCTGGGCAGGTTGAAGAAACTGAGGAATCAAGACTTAGGCACGTCTATCCACCGTTGCTTGACCAGAGACCCGATCACCATTTTGCGCGATCTTCCTCATCTGCTGACATGAAGTGCGGCATTTCTTTGGAGTTGCACAGTTATAGTAAGGAACAGTACGAGG
GGAACAAAATGACAGAGTTGAATACAACCTGGCAAGATTGCAATGATGACATTTGCAGACTTCCATCCATGGCATCCTCAAGTTGTGTTGAAAATTGTGACTTTCAAACTTGTGCCTTGAACTCTGATACTTGTAGAGAATCAGTTTCATTTTCGTCTAAGAAAAACTTGATAGAGGAGCACTCTAGAGAGGGGGTGCTT
TCATTTTCTTGTGAACTCGAAAAACAATGCGTTCCGACAGAAATAATCCATGTATCAAAGACTAAAGTCCAAGGAAGTGGAGTGCAGTTTTTGGCTGAACAAATTGAAATTGAAGCACATCTGACTGAGAATGCGCAGTGTAGTTCAGAAGATATTTATTTTGATGGGAATAATGGGAAACAGGGAGATACAATCATTGC
TCACAACTCAGTTTACACAAAAAGAGGACATGACATGCACGAGAATGATGTGGAGGAATCTTTTATTTGTGAGAAATGTGGACAGAAATTCAGTTGTGATGAGCAAAACAGGCAGGAACATGAAGATTACCATTATGCACTAGAGCTGCAGTCAAAAGAAACAAATCAAACAACTACATCACTGAATTATTGCAGGAATA
GAAGCAACCATTTGGTTGGCCAATCTTCTTCAAAGAAAAAGAAGAAAAATCAGTGTGTCACTCTAGATTCATTTTTTTCTAGGTCAAAGTAATATTATCTGAATCAAATCTAAGAAACTTTATCAGGGCCCTTTAGTGCTTCTTGGGTTCACATTTGGAGTACGAAAGGTTGTCTATAATGCAATTATCATTAAAGCAGG
ACATTATCACTTTTGATGATTCTGCCAGTGGCTTAGTATGCTTCATCAACCGAGGTAGCAGCTCGATAACTTATCTTGTTCCATATTTCTCAACCATATTAACCCCACTCTAGTAAAATTTCAAAAGCAAGATTTCTAATTTCAGTCCATCATGGTCGGTACAAAATGAGCAACTCAGGCCAGGAAGCCAGTCTGGATCA
CAAGTTTGTTTTGGCTTCATTGGGCTTTCTTTATCATCAGGCTTAGTCTTGGTTGGGATTTAATACATAGTTGGATGGTTTTGTAAATTATCTGTATTTCTATTATTGTAAATTCTCATCCACCTATCAACGAGTATAAGCCCGCATTCTTTTTTGTCATATTTTCCTTTAAACAATGAATAACCAGATAGATACATAGT
TAAAATTTAAGAGAAATGTTCTCACATTACCTCGCTCTCATTTTCTAAATTTATTAGGACACATGTTTCTACAGTCCGCTTTGATAAATTCTTAGGTAATCAATAATATCCTTACGTGAAAGTTACCATCTTGG