NA ----> NA
Intron 1 GTATTTTATA ... GCTTCATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 8 | 0 | 0 |
| A2 | 0 | 9 | 0 | 0 |
| A3 | 0 | 2 | 0 | 0 |
| A4 | 0 | 3 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 2.78 | 35 | 0 | 2 |
| A7 | 8.05 | 40 | 6 | 1 |
| A8 | 6.19 | 53 | 3 | 4 |
| A9 | 15.92 | 66 | 14 | 11 |
| A10 | 14.29 | 54 | 9 | 9 |
>TRINITY_DN37694_c0_g1_i4 from sample A8 / Example spliced isoformTTGTACGTCTCTCTATGTGAGCTGCACAATCTTGAAGCGAACTGAGTTATCGATCGAACAATAGTAAATATCACTATCGGAGGGTGAGAAAGCATGAATCGTGTGAAGCGCGAAGTTGTTCACGATAATTTCCTCTTCTTCTCTCCCACTGAGGATTCCCAAGAAAAATGTTGGGATGCAATTAAAGAAACGTTAGCATC
AAAAAAGAAAGCAGCCCTAAATGCTGAACTGGACAATAACGTAAATTCAAGCATAAATCCATCTACAAGCAATAAAAAAGGACTGAGATCTGTGAAAACCGGTCATACAATGGCTGTGATTTGGACGGTTTCAATACTCTTGGCTTTCTCCTTTTCATTACCTACTGTAATGTCTATTTTAAACCTTCATCGAATCAGAG
AATCATCGAGTACAAGTCTCAGAAAACTTTCAGACACCGGCCTTCTTTGGTTTAGATCTGGGACTTCATCGAATTTCTTTGGTCAATATTTCAAATCCATTGGAGAATGTTTTATGATGGAGTTATACGAAAAGGTGAAGAACATTTTCTCCATGGATCTTCCGTCTACCATGATGCACGTTGCAGCAAAAATTCCAAGA
TTCTGCACACGATTCGATTCGGAGAGGGTTCCCGTTGCTTTCTACAATGAACACGTATCAACACCCGCAGCAATAGAGCCAAATGATGCCATAGAACCAGACAGTTATACTCCTATGATCTGGGCAAGTCTGTTTATTGTGGCTGCTTTAGTATTCATACTGCTTATGCTAAGAGCTCTAATTCGTCCTAAAAAGTTGTT
GTCAGAGACCTATTGCTCACGTACAAGTAAAACCAAGCGTAACAAGCCTGGAGGTAATATTCAAATCACAACATGGACCAAAAAGCAGAAATCTATAGCACGCTACTTACGAGAAATAATTAAAACAACCATCGAATCCGCTGACTCTCCAAGGTTTGGGAGCTTTATCGAGTATGTAGAAATCCCAGTTTCCATTGAGG
GATCTCGATGTAAAGAACTGAAGGCTACTCCTGTGAGGAGATCCATGCGTATTCGTAATAAGAGCCTCACCCCCCTGCAGCCTGCACCAACTTTCACAAATCCATTACGGTGAACACAGCACGTCCACATCTCCATCGCGCTTATGGCTCTCAGTTATGGGGGCAGAGCATATTTATTTATTTATTTTTTAGATGTTTCT
GCAATATCTGCACACTATTTCCTTTGCACACAAAATCTTGAAGTTTGGATATATTAGTGTATCACGTTGCAACATGGCTTATAATTTAATGTTAGGTTCTTCTTAATCATATAATGTTATGTTCTTCTTAATCATATGGTATCTTTGTTAAATCCTAGAGTTTACTGTAAAAAGCCTTTGTGG
>TRINITY_DN37694_c0_g1_i2 from sample A8 / Example unspliced isoform:TACCATGATGCACGTTGCAGCAAAAATTCCAAGATTCTGCACACGATTCGATTCGGAGAGGGTTCCCGTTGCTTTCTACAATGAACACGTATCAACACCCGCAGCAATAGAGCCAAATGATGCCATAGAACCAGACAGTTATACTCCTATGATCTGGGCAAGTCTGTTTATTGTGGCTGCTTTAGTATTCATACTGCTTA
TGCTAAGAGCTCTAATTCGTCCTAAAAAGTTGTTGTCAGAGACCTATTGCTCACGTACAAGTAAAACCAAGCGTAACAAGCCTGGAGGTAATATTCAAATCACAACATGGACCAAAAAGCAGAAATCTATAGCACGCTACTTACGAGAAATAATTAAAACAACCATCGAATCCGCTGACTCTCCAAGGTTTGGGAGCTTT
ATCGAGTATGTAGAAATCCCAGTTTCCATTGAGgtattttatactcttccataacagtatatcatataaatgtgctctcgttaatagtataattctacttataatgatttgtttgtttccttggcttcattagGGATCTCGATGTAAAGAACTGAAGGCTACTCCTGTGAGGAGATCCATGCGTATTCGTAATAAGAGCC
TCACCCCCCTGCAGCCTGCACCAACTTTCACAAATCCATTACGGTGAACACAGCACGTCCACATCTCCATCGCGCTTATGGCTCTCAGTTATGGGGGCAGAGCATATTTATTTATTTATTTTTTAGATGTTTCTGCAATATCTGCACACTATTTCCTTTGCACACAAAATCTTGAAGTTTGGATATATTAGTGTATCACG
TTGCAACATGGCTTATAATTTAATGTTAGGTTCTTCTTAATCATATAATGTTATGTTCTTCTTAATCATATGGTATCTTTGTTAAATCCTAGAGTTTACTGTAAAAAGCCTTTGTGG