NA ----> NA
Intron 1 GTTGATCTAT ... CATTCCTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.96 | 20 | 33 | 38 |
| A2 | 72.73 | 6 | 7 | 25 |
| A3 | 74.55 | 7 | 16 | 25 |
| A4 | 49.3 | 18 | 16 | 19 |
| A5 | 45.45 | 9 | 5 | 10 |
| A6 | 64.67 | 53 | 49 | 145 |
| A7 | 63.1 | 62 | 96 | 116 |
| A8 | 55.61 | 87 | 53 | 165 |
| A9 | 63.06 | 58 | 78 | 120 |
| A10 | 62.9 | 46 | 57 | 99 |
>TRINITY_DN26973_c0_g1_i1 from sample A6 / Example spliced isoformAATTAGCCGCGAGTGTTCCCGTCAATCAAGAAAGGCTTAGGTTGTGAAAGACCAAAAGTTCAAGGTTTCAAATTGTTATTGATCATCAATATAGAAGTTCGGTCAGCATTGGGAAGTCCGAAAAATACATATGGAGGGGGATGAATCGGCGTCGAGTCTGCAGGGGATGTCGTGGTCTGCAAGCACTCGACATGATTAAT
TTCAGAGTGCAAATTTCCATAGGATTCCAAAGGTAGTAAGCTGTGTGTTTGCAACTATATAGAACTGATTCCTCTATTGGTTCCTACTTCGTATCTGCCAATAACGTTTTCATCGACGATGGCCACCGTGGGAGGAGTATTGAAATCAACCCATTTGAATGTATCGGAAACATACTCGCAGAACATCATTCGTTGGTCTC
CTCGTAACTTCTCTTCCTCCTACATTGCTTCTCACAACTATGGAAGAAGTTGCAGGCTGTTATTTCAGAAACCCCATTATGCCCGCACTGTCGCCGTTGCTATAAAACACCAGGGGAGAAGAATGGTTCCATTGAGAATCTCCGCTTCATTTCATGAGGTGGATGGAGATCAGTTATCAGCTGCCGCCTCACTAGTCCAA
CAGGAGGAAGAAGAAGAGGAGCAGGAGGACGAGGAAGGCGCAGAGGAAGTACCCCCATTGAAAGCAAACGAGTCCAACATGGAAGTCGTGAAAGAAGCAATTCGAAGAATCACAGAAGAAGATCTAGACGTTGCAATTGAAAAGTACAACTTGGCAGATGAGCTATCTGCAAAAATCGATTATGGGCAGATTAATGCCTT
CACTGAGAATCCATTTGGAGGGAACCCAGCAGCTGTGTGTTATCTTCCGTATGAGAAAGAATTAGCGTGGATGCAGCTAGTCGCAAGACAGTTCAATCTTTCAGAGACGGCTTTCTTGGTGAAGAGATGGACCTCCTCAAAGAAGGCAAGTTTAGAGGGGGAGCAAGCGCTGCTGGAGCTGGATACCAGTGGAAAGTCTC
TCAAAGCTGTCAAGAGAAACTTGGCTCCTGCAGGACCGAAGAATGAGTTTGACCTCAGATGGTTTACACCCCAAGTCGAGGATCCAGTTACAGGCAGTGCTCATTGTACATTAGGTCCTTACTGGTCTGACAAGCTTCAAAAGGACACGTTGGAAGCTTATCAGGCTTCAGAACGTGGAGGAAAAGTTAGTGTGATAGTT
GATAAAGTTGGAGGGCGTGTTAATTTACAAGGTAGTGCAGTGCTTGTCATGGTGGGAACACTCGTGAATAGCCACATAGTTTCTTCTTGCTGAACAGTTTTATATACTTTCATCTGGAGCATGTTTTTATTGCCCTTGACTACGAATCTCATATTGTTGAATAGTGACCTTGTCTAGGAAACTCATTGTTGAATATTCTC
TTTCTTATGTGGATGATAAGGTAAAACTGGTTCCTTCAAATGGACTTGACCTTGACATTCATTTATTCTAGATTTTTAATTGTGAAGCTAGATGGAATGTCTTGTATTCAGGAAATTAGTACTATTTCCAATTAAAATTCAGTAATTTTTATGTTAAATAAAGTTGGAAGCTGATCAGTGGATTGTAAAAATATATTTTT
CGTGGATTTTATTGGTTAATAATAAATATTTGATCAGCTCAATGCTCT
>TRINITY_DN26973_c0_g1_i2 from sample A6 / Example unspliced isoform:AATTAGCCGCGAGTGTTCCCGTCAATCAAGAAAGGCTTAGGTTGTGAAAGACCAAAAGTTCAAGGTTTCAAATTGTTATTGATCATCAATATAGAAGTTCGGTCAGCATTGGGAAGTCCGAAAAATACATATGGAGGGGGATGAATCGGCGTCGAGTCTGCAGGGGATGTCGTGGTCTGCAAGCACTCGACATGATTAAT
TTCAGAGTGCAAATTTCCATAGGATTCCAAAGGTAGTAAGCTGTGTGTTTGCAACTATATAGAACTGATTCCTCTATTGGTTCCTACTTCGTATCTGCCAATAACGTTTTCATCGACGATGGCCACCGTGGGAGGAGTATTGAAATCAACCCATTTGAATGTATCGGAAACATACTCGCAGAACATCATTCGTTGGTCTC
CTCGTAACTTCTCTTCCTCCTACATTGCTTCTCACAACTATGGAAGAAGTTGCAGGCTGTTATTTCAGAAACCCCATTATGCCCGCACTGTCGCCGTTGCTATAAAACACCAGGGGAGAAGAATGGTTCCATTGAGAATCTCCGCTTCATTTCATGAGGTGGATGGAGATCAGTTATCAGCTGCCGCCTCACTAGTCCAA
CAGGAGGAAGAAGAAGAGGAGCAGGAGGACGAGGAAGGCGCAGAGGAAGTACCCCCATTGAAAGCAAACGAGTCCAACATGGAAGTCGTGAAAGAAGCAATTCGAAGAATCACAGAAGAAGATCTAGACGTTGCAATTGAAAAGTACAACTTGGCAGATGAGCTATCTGCAAAAATCGATTATGGGCAGATTAATGCCTT
CACTGAGAATCCATTTGGAGGGAACCCAGCAGCTGTGTGTTATCTTCCGTATGAGAAAGAATTAGCGTGGATGCAGCTAGTCGCAAGACAGTTCAATCTTTCAGAGACGGCTTTCTTGGTGAAGAGATGGACCTCCTCAAAGAAGGCAAGTTTAGAGGGGGAGCAAGCGCTGCTGGAGCTGGATACCAGTGGAAAGTCTC
TCAAAGCTGTCAAGAGAAACTTGGCTCCTGCAGGACCGAAGAATGAGTTTGACCTCAGATGGTTTACACCCCAAGTCGAGgttgatctatgtggacatgctacactagcagctgcccatattctatttacatctggaatagttgaagatgacattgttatttttcacacaagatcaggaattttaaaggcaaaaagaatc
agaggatatgatgaaccacctccaaaaggggtggaaaactgtaaacagcgacctggaactggtgtcattgaacttgactttccattggtcccagtttctaaatgcgcgtctgctgaagttgaaaaattgtcagatatactaggagatgttcaaatagtttgggcaggactgaacagcttgggtgattacttggttgaggt
cccaagtgccaatgatgtgaaacaattgaagccagactttgagaagatgttaaagtttgaagggcgtggaggcctcattgttacatcagttgcagacccagatagcgagtttgatttcatttcaagattcttttgtccaaaagcgggcattcctgagGATCCAGTTACAGGCAGTGCTCATTGTACATTAGGTCCTTACT
GGTCTGACAAGCTTCAAAAGGACACGTTGGAAGCTTATCAGGCTTCAGAACGTGGAGGAAAAGTTAGTGTGATAGTTGATAAAGTTGGAGGGCGTGTTAATTTACAAGGTAGTGCAGTGCTTGTCATGGTGGGAACACTCGTGAATAGCCACATAGTTTCTTCTTGCTGAACAGTTTTATATACTTTCATCTGGAGCATG
TTTTTATTGCCCTTGACTACGAATCTCATATTGTTGAATAGTGACCTTGTCTAGGAAACTCATTGTTGAATATTCTCTTTCTTATGTGGATGATAAGGTAAAACTGGTTCCTTCAAATGGACTTGACCTTGACATTCATTTATTCTAGATTTTTAATTGTGAAGCTAGATGGAATGTCTTGTATTCAGGAAATTAGTACT
ATTTCCAATTAAAATTCAGTAATTTTTATGTTAAATAAAGTTGGAAGCTGATCAGTGGATTGTAAAAATATATTTTTCGTGGATTTTATTGGTTAATAATAAATATTTGATCAGCTCAATGCTCT