NA ----> NA

Intron 1 GTAGGGTTGG ... AAATTAACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	81.82	4	8	28
A2	79.22	8	4	57
A3	66.67	11	13	31
A4	74.55	7	7	34
A5	69.05	13	21	37
A6	75	6	28	8
A7	82.35	3	21	7
A8	72.22	5	18	8
A9	52.38	10	10	12
A10	52	6	7	6

>TRINITY_DN35479_c0_g1_i3 from sample A9 / Example spliced isoform

CTAAAACTCATTTACACGCTTTACTATTTATAACAGACCTCTTGGGTCCATTGTGGGAGGGTAAGTGCTGCCGGCCGTTCTACACCAAAGGCGGCCATCAACAGATCAGGGTTTGGAAATGGACAGATCAAGGTTTGGAAGCATTTGGAAGAAATGGACAGATCAGGATTTCTATGCCTTGGTAGCTACTATTGATGCTT
GCAATGCGCTGATGATTGGTGATCCCAGCTCACTCTGAGGCCCTTACGTGCCCGTGAATTTAATATTCACCCTACTTCTGAGCACATCATATGCTAGATTTGTTAGTTAGCGTTTCTTTTTTCTGTACTGTTTAGAGATGAGCATCATCTTCTTTTTTACTCCTATTTTCTTTTCTCTTTCTAGTATTTGACCGGTTGGG
TTTTGAAGTTGGTTTTAATTTCGCCGGTAATGCAATTTATTTGTTAGAAG

>TRINITY_DN35479_c0_g1_i1 from sample A9 / Example unspliced isoform:

CTAAAACTCATTTACACGCTTTACTATTTATAACAGACCTCTTGGGTCCATTGTGGGAGGGTAAGTGCTGCCGGCCGTTCTACACCAAAGGCGGCCATCAACAGATCAGGGTTTGGAAATGGACAGATCAAGGTTTGGAAGCATTTGGAAGAAATGGACAGATCAGGATTTCTATgtagggttggattttattaagttcc
tgtccgtttttagagttatcttttatgcaataaaatgaaatggttgaaattaactggccgtgataggtcctattaatggttgcaatgcaatgatgatcggtgatcccagctcactctgaggcccttacgtgcccaggaatttaatattcaccctacttctgagcattttttttaataatgtgatgaaataaaatggctga
aattaacagGCCTTGGTAGCTACTATTGATGCTTGCAATGCGCTGATGATTGGTGATCCCAGCTCACTCTGAGGCCCTTACGTGCCCGTGAATTTAATATTCACCCTACTTCTGAGCACATCATATGCTAGATTTGTTAGTTAGCGTTTCTTTTTTCTGTACTGTTTAGAGATGAGCATCATCTTCTTTTTTACTCCTAT
TTTCTTTTCTCTTTCTAGTATTTGACCGGTTGGGTTTTGAAGTTGGTTTTAATTTCGCCGGTAATGCAATTTATTTGTTAGAAGAAGAAAAAAAGGAAAAAAAAAAAGAGAG