NA ----> NA
Intron 1 GTTTTGATTG ... ATTATAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.68 | 10.6 | 6.7 | 6 |
| A2 | 47.68 | 9.5 | 6.7 | 8 |
| A3 | 29.86 | 6.8 | 5.9 | 2.4 |
| A4 | 43.64 | 8.1 | 0 | 6 |
| A5 | 22.73 | 8.5 | 0 | 2 |
| A6 | 36.23 | 13.3 | 7.6 | 7 |
| A7 | 38.85 | 22.8 | 4.3 | 14 |
| A8 | 34.91 | 18.7 | 7.7 | 9.6 |
| A9 | 34.16 | 17.4 | 12.4 | 8 |
| A10 | 33.7 | 22.6 | 3.3 | 11 |
>TRINITY_DN107972_c0_g1_i4 from sample A2 / Example spliced isoformCTCTTTCTTCCTCTTCTCTTCTCTCTTGCCATGTTCATGTCAATGTCATCATTCCACTCCCATTCACTTTTCGTGGCACCAACATAAAAAATTCCCTCAAGTTCGATGCCCTGTTATACATATCATTAATCATCATCTTTCACCTCTCAACACCGACCAGCCGCAGAGGAACCGGAGCTTGATCGATTCCATTAACATTC
CGTAAGATAATCAAGGACAAACGGGGGCGGATTACAGGCAAATACTAGTTGACATTGTTCAGATTCAGTTTGTTTACAGTGCAGCTTACAAAAATACTTTTACATGATGGTGCCCAAGAGTTCTTCCCCAATCTTTTTGAAGGTTTCATCAAAAGGATTATGTTGGATTGACCTCATGTACCAAAAATTTGAGGCTATTT
GTGAGGAAGTGGATAAAGATCATACCCTTTTAATGCAGGAAACAACAAAGTATGTTGAAAATCAGATGAGTGCAGTTGGCACAAATGTGCAGAAATTCTTTGCTGACTTTATGGAAGATATTATGCCACCAGCTCCTGAAATAGACATCAAGTGCTTATCTTTGAAAGGGTCTGTTGACTCCACAGAAAATTGCAAGTTG
TCAGAACAGTCAGAGCCAGAAAAAGAAAACATTCAGGCAGAAAATTCTCAATATCCAGACTCTCCTCTTCTTCATCACGAAACAGTCTTTGAAATGACAGCTTCAGACACTGCAGATACTGCAATACAGCTAGGAAGTCCAAATCCTCAGGAAGAAAACATTTCTGCAAAATCAATATCTCAAAAGCCAACTCAAAAGAA
GACTATGGATTGCGATATTGAGGTAGACCCCTCTGGAGATCAATTTGAAGATAAAAGGAATTTGCAGGAAACTATCTGTTTATATGAAAATGCAGAGCATTTGGTATGGCAGGCTATTCCGTTAGTTAAATTCGAAAGCATGCTGCTTGCTGATAGAACTGATGATGCAGAAATTGAAAGCCCTGCAGAACAAGCAGGTG
TGGGAAGTTTGGATAATGCATGCAAAATTCAATTAGGAGGTAGTCCGAGTCCTGGGGACAGGTATATTAAAGAGAAAAGGACATTGAAGGAGAACTTTGAGGGAACTGCAACCGATAAACTGGATAACTTAAACGGAGATGGAGAAAGATTCCTTTCTGTTGTTGAACCTTCTATTGCAAACACCCCTAGTTGCTCTAAG
GAAGGGGATCTCAAAGAGTGTTTGTCTGTAGAAGTTAATGAGAAAGAACAAACTGCTTATTGGTATGAAAAGGAATATGTTCAGACTCAGGATGGAATTGACGAATCATTCTCCAGCCATTTTGTAGATGTTGCAGTCACCAATGAATGTCCTAGTGCTGAAATCTCTGATTCAGACTGGGAAGTTCTGTAAGATATCTC
TTCTCAAGTTGGATCCCTGAGATTGTACATAAAATAAAGGACCTTCACTCTAGAGACAATTGTGACACTCGTCTAGTTTGGCTAAAGTGGCAGTATATTTGTTATACCAAAAAGATGCTTCATAGGTGCTGTGGTTGGGGATGAATGATGATATGTCCTGCCATTCTTCAGGAATAAATTTGGAGCACTCCATCCCATAT
CATTATTTAATGAATCAGTATTCCACCGACTAGGAGTAGCCTAAGTGAATCTGTTGTTTTAATATTATTTATTAGACAACATGAATTTGAATCTGTGGTAAAGTATTTACTGAGTGCTATAATGGTATGTTGAGTGCAGTTTGGGAGTTTCTTGGCCAGAATAAGTCCTTTACATTAATATCAGAGTGGTTCCTGTTCAG
GATAGACAAGAAATATATAGACCTTGAAGCTCTC
>TRINITY_DN107972_c0_g1_i2 from sample A2 / Example unspliced isoform:CTCTTTCTTCCTCTTCTCTTCTCTCTTGCCATGTTCATGTCAATGTCATCATTCCACTCCCATTCACTTTTCGTGGCACCAACATAAAAAATTCCCTCAAGTTCGATGCCCTGTTATACATATCATTAATCATCATCTTTCACCTCTCAACACCGACCAGCCGCAGAGGAACCGGAGCTTGATCGATTCCATTAACATTC
CGTAAGgttttgattgcagtaattgcaatattgaggtgcccagatagaaatggaggctggggaatccatctgcaatgtcaaaaaagacagtttttcattgtcgaaattggtattttccattgtcagatcccatttagttgctggatggaaagtgtggtttgctaccaagattaaagggctccaggaataacctctccaac
aggcttcctaataaagggatgaggctggatgtgagtcgtcagtgaattttggcagaatgaatccccctcaaacccagcacctatcataaagggggtgaatttttatcaagttaagcatgcgtacaagcttgagcttgacgtacacggatgtgacaacaagattaattctccactattatgccatacaggatattcattat
aaaagATAATCAAGGACAAACGGGGGCGGATTACAGGCAAATACTAGTTGACATTGTTCAGATTCAGTTTGTTTACAGTGCAGCTTACAAAAATACTTTTACATGATGGTGCCCAAGAGTTCTTCCCCAATCTTTTTGAAGGTTTCATCAAAAGGATTATGTTGGATTGACCTCATGTACCAAAAATTTGAGGCTATTTG
TGAGGAAGTGGATAAAGATCATACCCTTTTAATGCAGGAAACAACAAAGTATGTTGAAAATCAGATGAGTGCAGTTGGCACAAATGTGCAGAAATTCTTTGCTGACTTTATGGAAGATATTATGCCACCAGCTCCTGAAATAGACATCAAGTGCTTATCTTTGAAAGGGTCTGTTGACTCCACAGAAAATTGCAAGTTGT
CAGAACAGTCAGAGCCAGAAAAAGAAAACATTCAGGCAGAAAATTCTCAATATCCAGACTCTCCTCTTCTTCATCACGAAACAGTCTTTGAAATGACAGCTTCAGACACTGCAGATACTGCAATACAGCTAGGAAGTCCAAATCCTCAGGAAGAAAACATTTCTGCAAAATCAATATCTCAAAAGCCAACTCAAAAGAAG
ACTATGGATTGCGATATTGAGGTAGACCCCTCTGGAGATCAATTTGAAGATAAAAGGAATTTGCAGGAAACTATCTGTTTATATGAAAATGCAGAGCATTTGGTATGGCAGGCTATTCCGTTAGTTAAATTCGAAAGCATGCTGCTTGCTGATAGAACTGATGATGCAGAAATTGAAAGCCCTGCAGAACAAGCAGGTGT
GGGAAGTTTGGATAATGCATGCAAAATTCAATTAGGAGGTAGTCCGAGTCCTGGGGACAGGTATATTAAAGAGAAAAGGACATTGAAGGAGAACTTTGAGGGAACTGCAACCGATAAACTGGATAACTTAAACGGAGATGGAGAAAGATTCCTTTCTGTTGTTGAACCTTCTATTGCAAACACCCCTAGTTGCTCTAAGG
AAGGGGATCTCAAAGAGTGTTTGTCTGTAGAAGTTAATGAGAAAGAACAAACTGCTTATTGGTATGAAAAGGAATATGTTCAGACTCAGGATGGAATTGACGAATCATTCTCCAGCCATTTTGTAGATGTTGCAGTCACCAATGAATGTCCTAGTGCTGAAATCTCTGATTCAGACTGGGAAGTTCTGTAAGATATCTCT
TCTCAAGTTGGATCCCTGAGATTGTACATAAAATAAAGGACCTTCACTCTAGAGACAATTGTGACACTCGTCTAGTTTGGCTAAAGTGGCAGTATATTTGTTATACCAAAAAGATGCTTCATAGGTGCTGTGGTTGGGGATGAATGATGATATGTCCTGCCATTCTTCAGGAATAAATTTGGAGCACTCCATCCCATATC
ATTATTTAATGAATCAGTATTCCACCGACTAGGAGTAGCCTAAGTGAATCTGTTGTTTTAATATTATTTATTAGACAACATGAATTTGAATCTGTGGTAAAGTATTTACTGAGTGCTATAATGGTATGTTGAGTGCAGTTTGGGAGTTTCTTGGCCAGAATAAGTCCTTTACATTAATATCAGAGTGGTTCCTGTTCAGG
ATAGACAAGAAATATATAGACCTTGAAGCTCTC