NA ----> NA

Intron 1 GTTGGGTTGC ... TGGCTAGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60	1	2	1
A2	17.65	7	3	0
A3	40	6	7	1
A4	100	0	2	2
A5	33.33	2	1	1
A6	37.78	14	15	2
A7	56	11	12	16
A8	54.17	11	23	3
A9	51.72	7	12	3
A10	34.88	14	12	3

>TRINITY_DN84875_c0_g1_i2 from sample A3 / Example spliced isoform

AAAGGGAAAAAATATGATGAAGCTCCTTGACTCCTTTTGTAAATTTTTCTTGTTAAGGTTGAATGGATCAAGTGCTACATCTGAAACATTTGGTAATCCATGTCTTGCACACACAGAAGACTTCATAGTGACAGACATTGAGCTCTGGGGATTTGCTCACACATCAAAATACTCATTAGCGCCATATAGTGAACCACAAG
AAGCTCCAGGAATCAGCAGATTGTACACCTAAACATTGGCATCATTCGCACGTGCTGGGAGAATGGTGTGAATTGGCTAAACTTGAAGAAACTATTTTTGTTTTCAATATTGATCATGTGCTAAGCGG

>TRINITY_DN84875_c0_g1_i1 from sample A3 / Example unspliced isoform:

AAAGGGAAAAAATATGATGAAGCTCCTTGACTCCTTTTGTAAATTTTTCTTGTTAAGGTTGAATGGATCAAGTGCTACATCTGAAACATTTGGTAATCCATGTCTTGCACACACAGAAGACTTCATAGTGACAGACATTGAGCTCTGGGGATTTGCTCACACATCAAAATACTCATTAGCGCCATATAGTGAACCACAAG
AAGCTCCAGGAATCAGCAGATTGTACACCTAAACATTGGCATCATTCGCACGTGgttgggttgctattcccttcattttatattatcaaggcattttgaatatttataattccactttctgcatattcgtaaggccatatcagtatgccattcattaacatcaaattgctacatggtctggaatagtcagcctattgtgg
tctcagctacaaactaattatttattcacagcatttttcatttatagaaatatcatacattttgaacttcaaatgcccagtaattttctttttgtaggaactgtcatggcaaacgttattactgcataactgtgttttgatcgttataatgtttttggctagaagCTGGGAGAATGGTGTGAATTGGCTAAACTTGAAGA
AACTATTTTTGTTTTCAATATTGATCATGTGCTAAGCGG