NA ----> NA
Intron 1 GTACCACTAT ... TTCAATATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.85 | 168 | 4 | 27 |
| A2 | 13.14 | 119 | 2 | 18 |
| A3 | 13.71 | 151 | 3 | 24 |
| A4 | 14.41 | 101 | 0 | 17 |
| A5 | 21.98 | 71 | 0 | 20 |
| A6 | 20.5 | 221 | 10 | 57 |
| A7 | 18.52 | 497 | 26 | 113 |
| A8 | 20.62 | 412 | 17 | 107 |
| A9 | 17.74 | 561 | 6 | 121 |
| A10 | 17.8 | 411 | 9 | 89 |
>TRINITY_DN42089_c2_g2_i1 from sample A8 / Example spliced isoformGTTGGAGTGTTTAGTTTCTTATTATGCCTGTTATGGGTGAACCCACAAGTCATCTGATTGCCTGCGGAGAGGAGGTAGGTGATCAGATCGACTCCCGCCCAAGCCAAAATGGGCCTCCCCTTGGGCGTGGAAGAGACGGTGCCTGGATCCCACGAATACAGGGTAAAAATTGTGGGATCTAGGTACTATGTGGACCATAT
GTTTGTCACTGCCACGGCAGGGGCCGTGGCCTACGACGTTTTCAACATACTGGCGCTGAAGACGGGTATGATCAAGAGCGACAAGGGCTACAATTTTAGAGAAGAATCCAGAGAGTTTCTGGGTCACATGGTGAATACAGAAATTGTGTCAGACCAAGATCAAGTCCCTTTGGTAGTCAAACATATGGGCCGGATGCTGG
ATACCTTTCTGCAAAGACAAGCTCCCGTGTTTCCTGTTTTACAAGAAGTGTATGATCCGAGGGTCAATTACTGCTTTCGGGACTATAATAATTTCTCCCCAAAGGGCATCGACGAGGTCCCTGGACTGCAAACCTTCAAGGCATTCTACGATGGCGGTGACATTTTTCCTGACCGCCCCAAGCGCGGGCGCCCCCGCAAA
ACTGTGCAAGTTGATCCCCAGGGAGAGGCGGCAGCCGCTATAACTGCGCAAGTTGATCCCCAGGGAGAGGCGGCAGCCGCTATAACTGTGCGAGTTGATCCCCAGGGAGAGGCGGCAGTCTACGATAGCGGTGATATTTTTCCTGACCGTCGGCGCGGGCGCCCCCGCAAAACTGTGCAAGTTGATCCCCAGGGAGAGGC
GGCAGCCCACGATAGCGGTGCGGCTTCCACTACCCCTCAGCGCAGGCGCAGCAGCAGAACTGTGAAAATTAATCCCCGGGAAGAGGGATTACCAGACACCGACACCAACACAAATGCGGGTACCAGCGCCGGCGCCCCTACCACATCTGGACGACGGAGTAGAAAGAGAAAGGTTGATGCTGCTACACTATCAGTAGCAG
AAGATGTGGTTCTTGGTCAGATGGAAGGTCATGTAACAACAGCACTGGTAGAAGCGGATTCTGGTCACCGTCCTCTTCCTCAGACAGAAGGTGATGTAGCAGCAGCAGTGGCAGAAGCGGCTTCTGGTCACCTTCCTCTTCCTCGGACAGAAGGTGATCTGCAGTCTGTTGCTGCTGAACAGGAATTGGGTAGAGGCAGA
GGAAGAGGCAGAGGCGAAGGAGGTGAGGGAGGCAGGGGTAGGGGTAAAGGAAGAGGAAGAGGAAGAGGAAGAGGCGAGGGAGGCC
>TRINITY_DN42089_c2_g2_i6 from sample A8 / Example unspliced isoform:TGCAAGTTGATCCCCAGGGAGAGGCGGCAGCCCACGATAGCGGTGCGGCTTCCACTACCCCTCAGCGCAGGCGCAGCAGCAGAACTGTGAAAATTAATCCCCGGGAAGAGgtaccactatcaccttactgttgaaattcaacgtcccaccccgtttttaaagaaaagtctaatatatataccctcttaggtagaaaaatg
tttgcagttatctgcgttgtttatggtctttttaacagacgttttgaacagaaatcctgatcatcttcaggtggttttttttaagaaaccatcatgaaatcttaatttcaggatggttttttcaaaagattcttgttatctttacttcctgaaatcttataatttcatgatttttttcaaaaaattcttgctatctctgc
tttcctgaagatgagcaagattgtgctccaaacgtccgtttcaaatctcttaagcagaaaaatccagaagaccatggaaaaaatctaatatataccctgttcttgactgaaaaatctatatctttatcgcattagaactaaaatcaaaatgcacttgatttcacaatttatatttatgtcacagtttaaaatttgaattc
atttcattttacaatctatatttcggattctagaagaagttttacatataagaaatcataaacagttttgaggatcaatttattgagatacatctcaaagttgtctttcctccacccataaattatacatttttgtcccaaagagatggtcatgctgtcaaatttcaatatagGGATTACCAGACACCGACACCAACACA
AATGCGGGTACCAGCGCCGGCGCCCCTACCACATCTGGACGACGGAGTAGAAAGAGAAAGGTTGATGCTGCTACACTATCAGTAGCAGAAGATGTGGTTCTTGGTCAGATGGAAGGTCATGTAACAACAGCACTGGTAGAAGCGGATTCTGGTCACCGTCCTCTTCCTCAGACAGAAGGTGATGTAGCAGCAGCAGTGGC
AGAAGCGGCTTCTGGTCACCTTCCTCTTCCTCGGACAGAAGGTGATCTGCAGTCTGTTGCTGCTGAACAGGAATTGGGTAGAGGCAGAGGAAGAGGCAGAGGCGAAGGAGGTGAGGGAGGCAGGGGTAGGGGTAAAGGAAGAGGAAGAGGAAGAGGAAGAGGCGAGGGAGGCC