NA ----> NA
Intron 1 GCCAGGAAAA ... TGACTTTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.85 | 116 | 22 | 25 |
| A2 | 21.14 | 69 | 15 | 22 |
| A3 | 20.54 | 89 | 24 | 22 |
| A4 | 18.92 | 90 | 22 | 20 |
| A5 | 16.22 | 31 | 5 | 7 |
| A6 | 19.15 | 473 | 110 | 114 |
| A7 | 17.91 | 566 | 137 | 110 |
| A8 | 17.89 | 638 | 135 | 143 |
| A9 | 17.1 | 611 | 117 | 135 |
| A10 | 17.23 | 454 | 87 | 102 |
>TRINITY_DN98926_c0_g1_i2 from sample A4 / Example spliced isoformCTTTCTTTTAACGAAATGGAAAAAGTCGAACAAACCTGAGCCTTTAGCTATATATACCATTTACATACACAGCGTATTTTCAATTCCCTCCCGTGGACGTTTGGGCAAACCTATACTAGGGCGGTCGATTACCTGTCATCCTTATTGCATGCAATTTTCTCTCGAGACCGCCCATCCATGGCCGATTCCGAGCTCAAATA
CGCTGCCATACCACAGGCTGGAATTATGAGCGAAGAATCCACAACGAAGGAAGGCCAAGCAGCAGAAAAAACGACATCAACACCAGAAAAACCCGATGCTCAGAACCCCAGAGAAGAAGAAAACCTCATGGAGCAAAACCCCGCTGCCGAAGGTCCCGCGTTTCAATCTCCCTCGCCACCTCCTGCGCCGCCGGCAGGCT
GCGGCCGCTGCCCATGCGGAGCGCCCGTGAATTTCCCGAATGGTGGTGGAATCGGCCTTTCGCCGCCGCCAGCGCCCACGAATTACAGGCCGATTAGGGCACCTGCCCTCCTGACGCCGCCCAACACGCAGGCGGTGATCCTTGCCCCCGTCCCGCAGGCCCAGAAGGTGTCCCTTGTCTCTGCGCCGTTCTCCTTCGAA
ATCCCGCGCAGGAGAATCTCCACCCCCGCGGATATCGAACACTTCCACAATTCGGACTCCGGAAGGGCTTTTCTGGGCTTCGTGGTGGCACTGAGCGAATCGATCCGTGGTCATAAAATCTCTGATGAATGCTTTGAATCCTCGGCCTTAAAGGGCATCGTCGAAATTCTGGGGATTATGAACGGGTGGATCGACGAAAT
ACCGCCCGTCCAGCAGCCCGCGCGGTACGGGAATCCCGCTTTTCGGCAATGGCAGGAACGGCTCCACCAAAGCCAGGAGTTGATGGACAAGGTCTTGACGCAGGATCTTCATGATGCAATTCCTGAGGTTTTTCCTTATTTTACCGATAGCTTCGGGAACGCTATGAGAATCGATTACGGGACCGGCCACGAGACCAATT
TTGCTGCCTGGCTGTTTTGCCTCGCCAGATTGGGTGTCCTCACGGAGAATGATTACCAGGCGGTGGTTTCGAGGGTCTTTGTGAAGTACTTGGGGCTGATGAGGAGATTGCAGACAACCTACTGGCTTGAGCCCGCAGGGTCACATGGAGTTTGGGGACTTGACGATTACCATTTTTTGCCCTTCATATTTGGGTCTTCT
CAGCTGGTGGATCACAAATATATGAAGCCCAAGTCTATTCACAATCAGGACATTCTTGACAATTTCTCCAATGAGTATCTCTATCTTTCCTGTGTGTCTTTTGTGAAGAAAGTGAAGAAGGGTCATTTGGCAGAGCATTCGCCCATGATCGACGATATCAGCGCTGTTCCGAATTGGGGCAAGGTGAACAGTGGGATGCT
CAAGATGTACAAGGCCGAGGTGCTGGAGAAGGTGCCCATCATGCAGCATTTCTTGTTTGGATCGCTTATCAAATGGGAGTGAGCCCTTAGATTTGAGCATAGAAGTGAACTCTGGAATGAGCCCCTACAGCAGGAGATTGTATGTTCTCACTGACCAAAGTTTCTATCTAGCGGTGCTCTCTCTACAACTCGTCAAAGGA
AAGGAAATGCAGACACATGTTTGTTGTGTATTACACATCTCTATTTCTTCTTTCAAATATTTTTTCTACTAGATAACCACATATTAAATGTGCTCCTAATGTTTGAGTTGCTGGTTCAGTAACTACTATTATTTTGCCTATAGCATTTTTGATATATATTTTGGACTTCAGTGTGTTGGAGTAAGCAGAAAAAATCTAGA
TGAATAGTATATATCATGTTCAAATTGCCAGGGAATAGAGATAAAGTATATATGCATTCATCCTATATGCTTAATTGGGGATATACTATTCATACATTTCTGTAAAGCACCCAATTATTTTTTCTTACCAGTTTCTCCACTGCTTTGCTGCTTGTAGTAGAGATGTGTATAGAGCTGACAAGATTTGTTCTTTGGCCAGA
GAATTTACAAATTAAATGGTTCACGCGATGCCAAATTCCTATTTATGGAATTTATTACGTTCTCTTCCTTCTCATGTTGG
>TRINITY_DN98926_c0_g1_i1 from sample A4 / Example unspliced isoform:CTTTCTTTTAACGAAATGGAAAAAGTCGAACAAACCTGAGCCTTTAGCTATATATACCATTTACATACACAGCGTATTTTCAATTCCCTCCCGTGGACGTTTGGGCAAACCTATACTAGGGCGGTCGATTACCTGTCATCCTTATTGCATGCAATTTTCTCTCGAGACCGCCCATCCATGGCCGATTCCGAGCTCAAATA
CGCTGCCATACCACAGGCTGGAATTATGAGCGAAGAATCCACAACGAAGGAAGGCCAAGCAGCAGAAAAAACGACATCAACACCAGAAAAACCCGATGCTCAGAACCCCAGAGAAGAAGAAAACCTCATGGAGCAAAACCCCGCTGCCGAAGGTCCCGCGTTTCAATCTCCCTCGCCACCTCCTGCGCCGCCGGCAGGCT
GCGGCCGCTGCCCATGCGGAGCGCCCGTGAATTTCCCGAATGGTGGTGGAATCGGCCTTTCGCCGCCGCCAGCGCCCACGAATTACAGGCCGATTAGGGCACCTGCCCTCCTGACGCCGCCCAACACGCAGGCGGTGATCCTTGCCCCCGTCCCGCAGGCCCAGAAGGTGTCCCTTGTCTCTGCGCCGTTCTCCTTCGAA
ATCCCGCGCAGGAGAATCTCCACCCCCGCGGATATCGAACACTTCCACAATTCGGACTCCGGAAGGGCTTTTCTGGGCTTCGTGGTGGCACTGAGCGAATCGATCCGTGGTCATAAAATCTCTGATGAATGCTTTGAATCCTCGGCCTTAAAGGGCATCGTCGAAATTCTGGGGATTATGAACGGGTGGATCGACGAAAT
ACCGCCCGTCCAGCAGCCCGCGCGGTACGGGAATCCCGCTTTTCGGCAATGGCAGGAACGGCTCCACCAAAGCCAGGAGTTGATGGACAAGGTCTTGACGCAGGATCTTCATGATGCAATTCCTGAGGTTTTTCCTTATTTTACCGATAGCTTCGGGAACGCTATGAGAATCGATTACGGGACCGGCCACGAGACCAATT
TTGCTGCCTGGCTGTTTTGCCTCGCCAGATTGGGTGTCCTCACGGAGAATGATTACCAGGCGGTGGTTTCGAGGGTCTTTGTGAAGTACTTGGGGCTGATGAGGAGATTGCAGACAACCTACTGGCTTGAGCCCGCAGGGTCACATGGAGTTTGGGGACTTGACGATTACCATTTTTTGCCCTTCATATTTGGGTCTTCT
CAGCTGGTGGATCACAAATATATGAAGCCCAAGTCTATTCACAATCAGGACATTCTTGACAATTTCTCCAATGAGTATCTCTATCTTTCCTGTGTGTCTTTTGTGAAGAAAGTGAAGAAGGGTCATTTGGCAGAGCATTCGCCCATGATCGACGATATCAGCGCTGTTCCGAATTGGGGCAAGGTGAACAGTGGGATGCT
CAAGATGTACAAGGCCGAGGTGCTGGAGAAGGTGCCCATCATGCAGCATTTCTTGTTTGGATCGCTTATCAAATgccaggaaaatgccttggagtcggttgtagcaacaaagcaattatacatggtagtcattgaaaaggggctcctgactttaagGGGAGTGAGCCCTTAGATTTGAGCATAGAAGTGAACTCTGGAAT
GAGCCCCTACAGCAGGAGATTGTATGTTCTCACTGACCAAAGTTTCTATCTAGCGGTGCTCTCTCTACAACTCGTCAAAGGAAAGGAAATGCAGACACATGTTTGTTGTGTATTACACATCTCTATTTCTTCTTTCAAATATTTTTTCTACTAGATAACCACATATTAAATGTGCTCCTAATGTTTGAGTTGCTGGTTCA
GTAACTACTATTATTTTGCCTATAGCATTTTTGATATATATTTTGGACTTCAGTGTGTTGGAGTAAGCAGAAAAAATCTAGATGAATAGTATATATCATGTTCAAATTGCCAGGGAATAGAGATAAAGTATATATGCATTCATCCTATATGCTTAATTGGGGATATACTATTCATACATTTCTGTAAAGCACCCAATTAT
TTTTTCTTACCAGTTTCTCCACTGCTTTGCTGCTTGTAGTAGAGATGTGTATAGAGCTGACAAGATTTGTTCTTTGGCCAGAGAATTTACAAATTAAATGGTTCACGCGATGCCAAATTCCTATTTATGGAATTTATTACGTTCTCTTCCTTCTCATGTTGG