NA ----> NA
Intron 1 GCAAATCGAG ... AATTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 6 | 6 |
| A2 | 50 | 10 | 14 | 6 |
| A3 | 55.56 | 6 | 10 | 5 |
| A4 | 66.67 | 9 | 22 | 14 |
| A5 | 83.33 | 1 | 7 | 3 |
| A6 | 72.97 | 10 | 20 | 34 |
| A7 | 84.85 | 5 | 30 | 26 |
| A8 | 78.38 | 8 | 15 | 43 |
| A9 | 76.74 | 10 | 26 | 40 |
| A10 | 60.19 | 14 | 15.3 | 27 |
>TRINITY_DN40475_c0_g1_i6 from sample A6 / Example spliced isoformTCTATCTCTTATTACATCGAAAAACTTTACCTCCGTATTCTCAATACTTATCCAGGTAGTAACATACTTAATTACAACCTGCGTCGACCGACGCCACAATCGAATGCCAGAGCTTGAAGTTTATTTAATGTGTGCCTATATGATGAAAGAAGATGACGACGATATTTTCCATAATGTCAGATCCATAAGCATTCATTAAC
TCTTTTGTAGTGCCAAGTTAGATCCTATTTCTAATGGAGCGAGGAGTCCAGAGGTGGGTTGTAAATATATCAGCGTGGAATCCTTCGGAGACAGAGTTTAGCTTCTGCATGTCCCTACTGCCCGCACACGAACATTCGGCCATCACAAGTTTTGTAAAAGTTGGAGATAGAAAGAGAGCTCTAGTGAGCCGTATGCTTCA
GTACATGCTTGTACAGGCAGTTCTAAACATTCCCTATGCTGAAATAGTCATAAAGCGCACAAAGGAAGGGAAGCCATATCTGATACTGGTGTTTGAAAGAAACATACATCAAAGCAGTGGGGGTTGGACTTGGATATAAATTAGACAGATTGGAATTCTTTTACCCTGCAAACCAGGTATGGGCCGATGTTGCATATCTT
AGAATTGACAGGAAAGAGGAGAAAGATTGGCGTTTCTCTCTTTATCAGCTTGGCAACTGCCATTGGGTATGTGTAGCTAGAGGCCATCCTAACAAGGCAGTAAGGAGTTACCGTAAAACATTATGGCAAGTAGAGTTTGATGAGAAAAATTACAAATATGGTCTTGAACTTCCAAGTAAGCCATTCACATTGTATGAAAT
TGAGCATCTCATTCCAGACAGTAGAAAGGAAGAGTATGCTAATAGTAGAATAGGTTCCGAGTAACTATTTTCTTGTATAATTGTGTAGTATGGATGGTAGTGATCCATTCAATCATTATTTTCTATTCTTTTTAGAGTTTACAAGCTTCTTTATTGAATATAAAGAGAGAGAAAACAAAGCTTTACAAAATTGGTCTCTA
GACAGACGTGCATTATATGAGGATGCCTTATGTATGCATGCTGTCGTTATATCTCACATGAAGTAACTTCCAGTCAAATTCACCATCCTGTGGCTATGACAGTTTCACCCATATTCTTGTTTTCTTATGAATGAAAATAATATTCGTTTTAATTACAATATCTGTGGC
>TRINITY_DN40475_c0_g1_i2 from sample A6 / Example unspliced isoform:CGTTTTCGGCGCAATTACTACAAAATTATACTATTAAACGCGGCTCCATCCGAGCGCGACAACGTTAATGATCACGCAAAAATCGGACGTAGGAAGAAAAGCAACGATCTGGTCTTGTATCGTTATAGATCCGGTGCTCAAGCTATCGATCAAATTATTACATACTGGAATTATATAATGGAAAATATAAGGAGGGCCAA
ACCTTGTAAATCAAGCTCCGTGGCAGGTTTCCGTGATAAATTCTAGGTGTAATTCTGTACTAGGTACCCCGTACAACTATGGGACTCTCTCCCCTATGATGAAAGAAGATGACGACGATATTTTCCATAATGTCAATCCATAAGCATTCATTAACTCTTTCGTAGTGCCAAGTTCATAATCATTCATTAACTATTTCTAA
TGGAGCGAGGAGTCCAGAGGTGGGTTGTAAATATATCAGCGTGGAATCCTTCGGAGACAGAGTTTAGCTTCTGCATGTCCCTACTGCCCGCACACGAACATTCGGCCATCACAAGTTTTGTAAAAGTTGGAGATAGAAAGAGAGCTCTAGTGAGCCGTATGCTTCAGTACATGCTTGTACAGGCAGTTCTAAACATTCCC
TATGCTGAAATAGTCATAAAGCGCACAAAGGAAGGGAAGCCATATCTGgcaaatcgagttgagaatcactactttcctaatttcaacttcaatacatcacatcatggagactatgtagctattgcctctgagcctctgtgcctggtgggcctggatattatgtgccatggattttctgaaaaggagtctgcaattgatta
tttgaagaatttctcaccatgctttacaagttttgaatggatgaatatattaaatgctggtcccaaagctgaggatctcttaaatcaattttacagATACTGGTGTTTGAAAGAAACATACATCAAAGCAGTGGGGGTTGGACTTGGATATAAATTAGACAGATTGGAATTCTTTTACCCTGCAAACCAGGTATGGGCCG
ATGTTGCATATCTTAGAATTGACAGGAAAGAGGAGAAAGATTGGCGTTTCTCTCTTTATCAGCTTGGCAACTGCCATTGGGTATGTGTAGCTAGAGGCCATCCTAACAAGGCAGTAAGGAGTTACCGTAAAACATTATGGCAAGTAGAGTTTGATGAGAAAAATTACAAATATGGTCTTGAACTTCCAAGTAAGCCATTC
ACATTGTATGAAATTGAGCATCTCATTCCAGACAGTAGAAAGGAAGAGTATGCTAATAGTAGAATAGGTTCCGAGTAACTATTTTCTTGTATAATTGTGTAGTATGGATGGTAGTGATCCATTCAATCATTATTTTCTATTCTTTTTAGAGTTTACAAGCTTCTTTATTGAATATAAAGAGAGAGAAAACAAAGCTTTAC
AAAATTGGTCTCTAGACAGACGTGCATTATATGAGGATGCCTTATGTATGCATGCTGTCGTTATATCTCACATGAAGTAACTTCCAGTCAAATTCACCATCCTGTGGCTATGACAGTTTCACCCATATTCTTGTTTTCTTATGAATGAAAATAATATTCGTTTTAATTACAATATCTGTGGC