sp|Q9FLH0|CRWN4_ARATH ----> Protein CROWDED NUCLEI 4
Intron 1 GTAAGTTTTG ... CTGAATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.33 | 120 | 23 | 46 |
| A2 | 24.18 | 116 | 28 | 46 |
| A3 | 22.1 | 104 | 26 | 33 |
| A4 | 27.06 | 62 | 22 | 24 |
| A5 | 29.87 | 27 | 11 | 12 |
| A6 | 20.79 | 40 | 8 | 13 |
| A7 | 21.69 | 130 | 26 | 46 |
| A8 | 21.32 | 179 | 40 | 57 |
| A9 | 21.67 | 159 | 35 | 53 |
| A10 | 17.73 | 123 | 7 | 46 |
>TRINITY_DN108170_c0_g1_i3 from sample A5 / Example spliced isoformCGGGGGAGACGGAAAACAGCATGGAACACTATGGACTTACATCGCAGCGGCAGCTGTAGCAGCGAAGGTTTATGCATTTATTTTTAGATTTGTTGACGGGCTCGCTGATCCAGATCGGCTGCAACGTTTTCTCCATTCCCCGATTTCTCGATTCCCAAGTTGCTATCTTTTTACAGGAATCGGCGACTCCTTCTGGGCTT
TAGGTGCAGCCGAGGGGGAATCGGCGGCTCCTTCTGGGCTTTAGGTGGAACTGAGGGGGTTTGGCGGTGTGTGAAATTCCATGGTATGTTATGCTGAAATTGGCGAGGAGGGTTTGTTAAGACTGGGTTTTAAGTGAAGACGGCAGAGGAGATTCTGGGTCAAAAAGCATGTTGAGCCCACAGAAGAGGGGATGGCGTTC
GCCTGTTTCTCCGTCGACAGACGGGAAGGAGAAGAACAAGGGTATCGTTGTTGTTGCGTCGTCACCTGAAGCTAGGAGTCCGGTTAGTTTTAGCGGGGGAAGCCCTGTGAATGAGAATGAGATGTGGAGGCGGCTCAGAGAAGCTGGGTTGGATGAAGAGACCCTCCAGAAGAAAGACAAAGCTTTCTTAGTTTCCTACA
TTACCAAATTGGAATCTGAGCTATATGATTATCAGTGTAATATGGGGCTTCTTTTAATAGAGCGTAAGGAATGGACATCCAAGTGCGAACAAGTGCAATTTTCTGCAAGTGAAGCGGAAGAGAAATTTAAGCAGGAACGAGCTGCACTTTCAGCTGCTAAAGCTGAAGCAGAGAAGCAAGAAGAAATCCTTAAAAAGGGT
TTAGGTGTTGAGAAACAATGTGTAGCTGATCTTGAGAAGGCTTTACATGAGATGCGCGCTGAGTGTGCTGAATTAAAGTTTATATCTGACAATAAATTGGCACAAGCTCGTGAGATGGTGGCTGCTACTGAAGAAAAGTCTCTTGCAGCTGAATCGAAGTTGCATGCAGGAGAGGCCCTGCAAGCAGAAGCCAACCGCAA
ACAGGCTGATGCAGAAAGAAAGTTACAGGAAGTTGAAGCTCGTGAAGATGCACTTCGAAGAGAGCGGCGGGCTTTCAAGTCTGAATGTGAATCTCGTGAGAATGAACTTGTTCTTGAGAGGCAAAACCTGCGAGGATGGGATAAAAAGCTTCAGGAAGGTCAAGAAAGGTTGCTGGAAGGCCAGAAATTCTTAAATCAAA
GAGAAGCACATATCATGGAAAGGGATGAGGCCTTAAAACATATTGAAAAAGAGTTGCACGATGTGAAAATGAATATTGAGAAAGAACATTCAACCTTGAAAGAGAAGGAAGCTGACTTGAGAACGAGCTTGGCTGCTCTATTGACTCGGGAGGAGGCTGTTGTTAAACAAGAAGTTATTGTAGACAGGAAAGAGCAAGAG
CTACTTGTTCTTCAAGAAAAGCTTGCAAGTAGGGAACGCGAAGAGATCCAAAGGCTCACTGATGAACACAAGGCTACACTTGAAGCAATCAGAATTGAGTTTGAAGCAGAATTGGAGCAGAAACGCAGGTTATTTGAAGATGAATGGGAAAACAAGGCAAATGCAACTGATTTGAGGGAGCTTGAAATTAACCGCAAAGA
GGAGAAACTAAGTAAAAGGGAAACTCACTTGGAGAAGAAAGCTGAAAAACTAAAAGAGAAGGAAAATGAACTAGACGCAAGGTCAAGGACTTTGAAGGAAAGGGAGAAAACTTATAAGATCGAGGAAAAAGAAATAGAAAATGGAAAGAAAAAGCTGGAGATGGAAAGAAAAGAAATAATCAATGCAAAGCAAGAACTCC
AAAAATTTAAGGCTTCCTTGGAGGAGGAGAGGTGCCAAATTCTCAAGGAACAACAGAGATTAGAGCTCACAAAAAATGAGAGGGATGAGTTGCTGGATCTACAAACCAAATTGAAAGAAGAGATTGATGACTTAAGAGCTCAGAAACAAGAATTATTGAAAGAAGCTGATGAACTGAATGTAGAAAAGGAAAAGTTTGAG
AGGGAGTGGGAAATTCTTGATGAGAAAAGAGAGCAACTCAGGAAGGAACTAGAATGGGTTGACGATGAGAGGAAGAAACTACCAAAATGGATGAAGGATGAAGAAGAAAGATTAAAGAAAGAAAAGATTGTACTGAGGGAAGAAATAAAGCGTGACGCAGAAGCTCTCCGTCTTGAGAAAGAGGCTTTTGAAAGCAGTAT
GCAGCATCAACGAGCAGTATGGTTTGCTGAAGTTCAGAGGGAGCGGGCAGATCTTGTCCGAGATATTGAGTTGCGAACCAGTGGATTGGAAAACAGTATTGAAACGAGACGGGAGGAGTTAGAGAGGCATTACCAGGAAAAAGAATTATCATTTAAAAAAGAGAAAGAGAAAGAAATGCAGTATATTAGTGCACAGAGGG
AACTGTTACATAAGGAAACAGAAGAAATGAAATCAGAAAGACAGAGACTTAAGAGAGAAAGGAAGGAAATTGCCACAAATCAGGAGCACACAGAGAAAGAGTGGTGTGAAATGAAGAAAGATATTGAAGAACTCCAGATCCAAAGAGAGAAGCTTAAGGAACAGCGAGAGTCACTGCACAAAGAGAGGGAAGAACTTCAA
GCAAAGCTTGAAGAACTGAAAAAATTAAAAGATGAGTTAAAAATGACAGAAGAGAGCTTAAAGGTTTCTGAGCAGCAACCTTCACAGGTCAATATAAATGACTATGAAGTTATTTCTCCTGGGCATGGCATTTCTCAGGCAGCACTTACACAAAGTGTTGTTGCTATGCCAGAGAATGCAAACATTGAGTTTAATTCTGG
GATATCTCCTGTGAGAACACCTGCAAGTGCCTCAACTCCTAGCCCTTTGGCATGGTTGCAGAAATGTGCTTCAAGACTTTTTAAACCATCCCCTGAGAAAGAGCTTGAATCTATTTTTCAGAAACAAGAAACTGAAAGAGCAGAAAATTTGGTTCCTGAACGAGTACCAGGCGCAGGGATTGACCCTGTGTCCTTTGCTG
GGAGACATAAGGATCATTTAGTTGAAAATGCAAAGCATATTAGTGAGCATATGGATGGTACACTTTATTCGAGGCCTGTTATGAACATAGCCCAGTCTCAATCATCCTTTGGGGGTGGCAATAAAGGTAAGGAAAATGCTAAAGGAAACCTTAGAGTTTTCAAAAGAACACGTTCCATAAGTGCTGTTGTACAGGAAGCT
AAAGACATCCTTGAAGTGCCTTCTGAAAGAGAGATTAATGAGTCAGACAATGTAAAGGAACCTGAACATGAAACTCTTGTGAACTCAACTGGTAATGGGGATACTCCATTGAATGGAGAAGAGGCAAGGAGGGATAAAGCAGAATTTGCTCAGGAAATTGATGAAGAAAGGGAGGACTCAATTGATAATGGTAAAATGAA
TTTGCATCCTGGACGGAAGAGACGCCACAGGTATTCCTCTCGGGAGACAAGTGAACACGATACTGAGGTTGTTGAAATTGAGTGTGACCTTACTAGTGCAGGGCATAGAAAGAGACATCAGCGAGAGACCACAGTTAGCCCAGGATTGGGAACTCCTAATGGGAAGCGCTATAATTTTAGAGAGTCCACCATTGCCAGTA
TGGTTTCTCTGCACACAGCATCTGCTGAGTGCAAAGACAAGGATGATCCCCATGGGGAAGAAAAAGATCCAAAGAATTCCGTTGAAAATAATTTGGAAGAAGTTAGCAAGGAGCCTGGGGAAGGCCTTCAATACAATGTTACGAAAGCAAGTCTGGCTGAAGTAAAGTTCAAAGTGCTTCCCCAAGGAAAGAAGCAAATT
ATGAAGAGATCCCAGCAGAAAACGTTAGAAGAGTTTGGAGGGGAACTTCTGGAAGGTTATTCACGTGAGCTTACAAGAGTACCTGTTTCCAGAGTCGACGAAGAGGATCATGAAGTTTATTCACAAGAGCTGACAATGTCTGAGACAGGCGAACTCTATGATGAGAGCAATGAGAATGAAGGCAACAATGATGATGATGC
TGAAACATTTGTTGGGACAGAACAAGATGATGAAGACGATGACGAGGAGCAGAAATCCCTGAAAGCGAAGTTATGGAATTTCTTAACCACATAATGAGTGAAAAAAATCCACTATCAAAGGATGTTGAATTTCTCCTTGGAGGTGAGAGTAGTCGTTATACACTTTTTTGTTGTCGAAGTGATACAGTAGAAAGTGCCTT
GTCCTGGAAATTCTCAGCACTCTCGCAAATGCACAATCCATCTTTGTTGCTGCTTCTGAATTTGAGTCTTGCGCGCTAGTCTTCTCATGTAAACATGTAATATTTCGGCCTGTATAATTGTTTGTCATTGATTTGGAGGTCCTACCGAGTTGAGTGTTAATATGTTATAGCATGTGCAGTCAT
>TRINITY_DN108170_c0_g1_i2 from sample A5 / Example unspliced isoform:ATGTGAATCTCGTGAGAATGAACTTGTTCTTGAGAGGCAAAACCTGCGAGGATGGGATAAAAAGCTTCAGGAAGGTCAAGAAAGGTTGCTGGAAGGCCAGAAATTCTTAAATCAAAGAGAAGCACATATCATGGAAAGGGATGAGGCCTTAAAACATATTGAAAAAGAGTTGCACGATGTGAAAATGAATATTGAGAAAG
AACATTCAACCTTGAAAGAGAAGGAAGCTGACTTGAGAACGAGCTTGGCTGCTCTATTGACTCGGGAGGAGGCTGTTGTTAAACAAGAAGTTATTGTAGACAGGAAAGAGCAAGAGCTACTTGTTCTTCAAGAAAAGCTTGCAAGTAGGGAACGCGAAGAGATCCAAAGGCTCACTGATGAACACAAGGCTACACTTGAA
GCAATCAGAATTGAGTTTGAAGCAGAATTGGAGCAGAAACGCAGGTTATTTGAAGATGAATGGGAAAACAAGGCAAATGCAACTGATTTGAGGGAGCTTGAAATTAACCGCAAAGAGGAGAAACTAAGTAAAAGGGAAACTCACTTGGAGAAGAAAGCTGAAAAACTAAAAGAGAAGGAAAATGAACTAGACGCAAGGTC
AAGGACTTTGAAGGAAAGGGAGAAAACTTATAAGATCGAGGAAAAAGAAATAGAAAATGGAAAGAAAAAGCTGGAGATGGAAAGAAAAGAAATAATCAATGCAAAGCAAGAACTCCAAAAATTTAAGGCTTCCTTGGAGGAGGAGAGGTGCCAAATTCTCAAGGAACAACAGAGATTAGAGCTCACAAAAAATGAGAGGG
ATGAGTTGCTGGATCTACAAACCAAATTGAAAGAAGAGATTGATGACTTAAGAGCTCAGAAACAAGAATTATTGAAAGAAGCTGATGAACTGAATGTAGAAAAGGAAAAGTTTGAGAGGGAGTGGGAAATTCTTGATGAGAAAAGAGAGCAACTCAGGAAGGAACTAGAATGGGTTGACGATGAGAGGAAGAAACTACCA
AAATGGATGAAGGATGAAGAAGAAAGATTAAAGAAAGAAAAGATTGTACTGAGGGAAGAAATAAAGCGTGACGCAGAAGCTCTCCGTCTTGAGAAAGAGGCTTTTGAAAGCAGTATGCAGCATCAACGAGCAGTATGGTTTGCTGAAGTTCAGAGGGAGCGGGCAGATCTTGTCCGAGATATTGAGTTGCGAACCAGTGG
ATTGGAAAACAGTATTGAAACGAGACGGGAGGAGTTAGAGAGGCATTACCAGGAAAAAGAATTATCATTTAAAAAAGAGAAAGAGAAAGAAATGCAGTATATTAGTGCACAGAGGGAACTGTTACATAAGGAAACAGAAGAAATGAAATCAGAAAGACAGAGACTTAAGAGAGAAAGGAAGGAAATTGCCACAAATCAGG
AGCACACAGAGAAAGAGTGGTGTGAAATGAAGAAAGATATTGAAGAACTCCAGATCCAAAGAGAGAAGCTTAAGGAACAGCGAGAGTCACTGCACAAAGAGAGGGAAGAACTTCAAGCAAAGCTTGAAGAACTGAAAAAATTAAAAGATGAGTTAAAAATGACAGAAGAGAGCTTAAAGGTTTCTGAGCAGCAACCTTCA
CAGGTCAATATAAATGACTATGAAGTTATTTCTCCTGGGCATGGCATTTCTCAGGCAGCACTTACACAAAGTGTTGTTGCTATGCCAGAGAATGCAAACATTGAGTTTAATTCTGGGATATCTCCTGTGAGAACACCTGCAAGTGCCTCAACTCCTAGCCCTTTGGCATGGTTGCAGAAATGTGCTTCAAGACTTTTTAA
ACCATCCCCTGAGAAAGAGCTTGAATCTATTTTTCAGAAACAAGAAACTGAAAGAGCAGAAAATTTGGTTCCTGAACGAGTACCAGGCGCAGGGATTGACCCTGTGTCCTTTGCTGGGAGACATAAGGATCATTTAGTTGAAAATGCAAAGCATATTAGTGAGCATATGGATGGTACACTTTATTCGAGGCCTGTTATGA
ACATAGCCCAGTCTCAATCATCCTTTGGGGGTGGCAATAAAGGTAAGGAAAATGCTAAAGGAAACCTTAGAGTTTTCAAAAGAACACGTTCCATAAGTGCTGTTGTACAGGAAGCTAAAGACATCCTTGAAGTGCCTTCTGAAAGAGAGATTAATGAGTCAGACAATGTAAAGGAACCTGAACATGAAACTCTTGTGAAC
TCAACTGGTAATGGGGATACTCCATTGAATGGAGAAGAGGCAAGGAGGGATAAAGCAGAATTTGCTCAGGAAATTGATGAAGAAAGGGAGGACTCAATTGATAATGGTAAAATGAATTTGCATCCTGGACGGAAGAGACGCCACAGGTATTCCTCTCGGGAGACAAGTGAACACGATACTGAGGTTGTTGAAATTGAGTG
TGACCTTACTAGTGCAGGGCATAGAAAGAGACATCAGCGAGAGACCACAGTTAGCCCAGGATTGGGAACTCCTAATGGGAAGCGCTATAATTTTAGAGAGTCCACCATgtaagttttgtttatcgagttcacatcagtcttcccgatttctttattttgttgcttgtaactattttatacaaagttttgatatgcatttt
cactctttctgaatgcagTGCCAGTATGGTTTCTCTGCACACAGCATCTGCTGAGTGCAAAGACAAGGATGATCCCCATGGGGAAGAAAAAGATCCAAAGAATTCCGTTGAAAATAATTTGGAAGAAGTTAGCAAGGAGCCTGGGGAAGGCCTTCAATACAATGTTACGAAAGCAAGTCTGGCTGAAGTAAAGTTCAAAG
TGCTTCCCCAAGGAAAGAAGCAAATTATGAAGAGATCCCAGCAGAAAACGTTAGAAGAGTTTGGAGGGGAACTTCTGGAAGGTTATTCACGTGAGCTTACAAGAGTACCTGTTTCCAGAGTCGACGAAGAGGATCATGAAGTTTATTCACAAGAGCTGACAATGTCTGAGACAGGCGAACTCTATGATGAGAGCAATGAG
AATGAAGGCAACAATGATGATGATGCTGAAACATTTGTTGGGACAGAACAAGATGATGAAGACGATGACGAGGAGCAGAAATCCCTGAAAGCGAAGTTATGGAATTTCTTAACCACATAATGAGTGAAAAAAATCCACTATCAAAGGATGTTGAATTTCTCCTTGGAGGTGAGAGTAGTCGTTATACACTTTTTTGTTGT
CGAAGTGATACAGTAGAAAGTGCCTTGTCCTGGAAATTCTCAGCACTCTCGCAAATGCACAATCCATCTTTGTTGCTGCTTCTGAATTTGAGTCTTGCGCGCTAGTCTTCTCATGTAAACATGTAATATTTCGGCCTGTATAATTGTTTGTCATTGATTTGGAGGTCCTACCGAGTTGAGTGTTAATATGTTATAGCATG
TGCAGTCAT
Intron 2 GTAAGTTAAT ... TGAATGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.55 | 47 | 2 | 8 |
| A2 | 17.24 | 48 | 3 | 10 |
| A3 | 22.22 | 35 | 3 | 10 |
| A4 | 0 | 14 | 1 | 0 |
| A5 | 22.22 | 14 | 0 | 4 |
| A6 | 30.77 | 9 | 0 | 4 |
| A7 | 20 | 52 | 0 | 13 |
| A8 | 24.04 | 79 | 0 | 25 |
| A9 | 14.06 | 55 | 0 | 9 |
| A10 | 31.11 | 31 | 2 | 14 |
>TRINITY_DN121549_c1_g1_i6 from sample A3 / Example spliced isoformGCGGACGTGTAGTGATTTTGAATCAGACGATCCTCTTTTGGTGCACGAATCGAAAGTGGTCACGTCATCGCACTTGGGTGAAGAGATCGGCCGGGAAAGGAAGCCGAAGAAAATTGTTTTTTCCGGGGGAGACGGAAAACAGCATGGAACACTATGGACTTACATCGCAGCGGCAGCTGTAGCAGCGAAGGTTTATGCAT
TTATTTTTAGATTTGTTGACGGGCTCGCTGATCCAGATCGGCTGCAACGTTTTCTCCATTCCCCGATTTCTCGATTCCCAAGTTGCTATCTTTTTACAGGAATCGGCGACTCCTTCTGGGCTTTAGGTGCAGCCGAGGGGGAATCGGCGGCTCCTTCTGGGCTTTAGGTGGAACTGAGGGGGTTTGGCGGTGTGTGAAAT
TCCATGGTATGTTATGCTGAAATTGGCGAGGAGGGTTTGTTAAGACTGGGTTTTAAGTGAAGACGGCAGAGGAGATTCTGGGTCAAAAAGCATGTTGAGCCCACAGAAGAGGGGATGGCGTTCGCCTGTTTCTCCGTCGACAGACGGGAAGGAGAAGAACAAGGGTATCGTTGTTGTTGCGTCGTCACCTGAAGCTAGGA
GTCCGGTTAGTTTTAGCGGGGGAAGCCCTGTGAATGAGAATGAGATGTGGAGGCGGCTCAGAGAAGCTGGGTTGGATGAAGAGACCCTCCAGAAGAAAGACAAAGCTTTCTTAGTTTCCTACATTACCAAATTGGAATCTGAGCTATATGATTATCAGTGTAATATGGGGCTTCTTTTAATAGAGCGTAAGGAATGGACA
TCCAAGTGCGAACAAGTGCAATTTTCTGCAAGTGAAGCGGAAGAGAAATTTAAGCAGGAACGAGCTGCACTTTCAGCTGCTAAAGCTGAAGCAGAGAAGCAAGAAGAAATCCTTAAAAAGGGTTTAGGTGTTGAGAAACAATGTGTAGCTGATCTTGAGAAGGCTTTACATGAGATGCGCGCTGAGTGTGCTGAATTAAA
GTTTATATCTGACAATAAATTGGCACAAGCTCGTGAGATGGTGGCTGCTACTGAAGAAAAGTCTCTTGCAGCTGAATCGAAGTTGCATGCAGGAGAGGCCCTGCAAGCAGAAGCCAACCGCAAACAGGCTGATGCAGAAAGAAAGTTACAGGAAGTTGAAGCTCGTGAAGATGCACTTCGAAGAGAGCGGCGGGCTTTCA
AGTCTGAATGTGAATCTCGTGAGAATGAACTTGTTCTTGAGAGGCAAAACCTGCGAGGATGGGATAAAAAGCTTCAGGAAGGTCAAGAAAGGTTGCTGGAAGGCCAGAAATTCTTAAATCAAAGAGAAGCACATATCATGGAAAGGGATGAGGCCTTAAAACATATTGAAAAAGAGTTGCACGATGTGAAAATGAATATT
GAGAAAGAACATTCAACCTTGAAAGAGAAGGAAGCTGACTTGAGAACGAGCTTGGCTGCTCTATTGACTCGAGAGGAGGCTGTTGTTAAACAAGAAGTTATTGTAGACAGGAAAGAGCAAGAGCTACTTGTTCTTCAAGAAAAGCTTGCAAGTAGGGAACGCGAAGAGATCCAAAGGCTCACTGATGAACACAAGGCTAC
ACTTGAAGCAATCAGAATTGAGTTTGAAGCAGAATTGGAGCAGAAACGCAGGTTATTTGAAGATGAATGGGAAAACAAGGCAAATGCAACTGATTTGAGGGAGCTTGAAATTAATCGCAAAGAGGAGAAACTAAGTAAAAGGGAAACTCACTTGGAGAAGAAAGCTGAAAAACTAAAAGAGAAGGAAAATGAACTAGACG
CAAGGTCAAGGACTTTGAAGGAAAGGGAGAAAACTTATAAGATCGAGGAAAAAGAAATAGAAAATGGAAAGAAAAAGCTGGAGATGGAAAGAAAAGAAATAATCAATGCAAAGCAAGAACTCCAAAAATTTAAGGCTTCCTTGGAGGAGGAGAGGTGCCAAATTCTCAAGGAACAACAGAGATTAGAGCTCACAAAAAAT
GAGAGGGATGAGTTGCTGGATCTACAAACCAAATTGAAAGAAGAGATTGATGACTTAAGAGCTCAGAAACAAGAATTATTGAAAGAAGCTGATGAACTGAATGTAGAAAAGGAAAAGTTTGAGAGGGAGTGGGAAATTCTTGATGAGAAAAGAGAGCAACTCAGGAAGGAACTAGAATGGGTTGACGATGAGAGGAAGAA
ACTACCAAAATGGATGAAGGATGAAGAAGAAAGATTAAAGAAAGAAAAGATTGTACTGAGGGAAGAAATAAAGCGTGACGCAGAAGCTCTCCGTCTTGAGAAAGAGGCTTTTGAAAGCAGTATGCAGCATCAACGAGCAGTATGGTTTGCTGAAGTTCAGAGGGAGCGGGCAGATCTTGTCCGAGATATTGAGTTGCGAA
CCAGTGGATTGGAAAACAGTATTGAAACGAGACGGGAGGAGTTAGAGAGGCATTACCAGGAAAAAGAATTATCATTTAAAAAAGAGAAAGAGAAAGAAATGCAGTATATTAGTGCACAGAGGGAACTGTTACATAAGGAAACAGAAGAAATGAAATCAGAAAGACAGAGACTTAAGAGAGAAAGGAAGGAAATTGCCACA
AATCAGGAGCACACAGAGAAAGAGTGGTGTGAAATGAAGAAAGATATTGAAGAACTCCAGATCCAAAGAGAGAAGCTTAAGGAACAGCGAGAGTCACTGCACAAAGAGAGGGAAGAACTTCAAGCAAAGCTTGAAGAACTGAAAAAATTAAAAGACGAGTTAAAAATGACAGAAGAGAGCTTAAAGGTTTCTGAGCAGCA
ACCATCACAGGTCAATATAAATGACTATGAAGTTATTTCTCCTGGGCATGGCATTTCTCAGGCAGCACTTACACAAAGTGTTGTTGCTATGCCAGAGAATGCAAACATTGAGTTTAATTCTGGGATATCTCCTGTGAGAACACCTGCAAGTGCCTCAACTCCTAGCCCTTTGGCATGGTTGCAGAAATGTGCTTCAAGAC
TTTTTAAACCATCCCCTGAGAAAGAGCTTGAATCTATTTTTCAGAAACAAGAAACTGAAAGAGCAGAAAATTTGGTTCCTGAACGAGTACCAGGCGCAGGGATTGACCCTGTGTCCTTTGCTGGGAGACATAAGGATCATTTAGTTGAAAATGCAAAGCATATTAGTGAGCATATGGATGGTACACTTTATTCGAGGCCT
GTTATGAACATAGCCCAGTCTCAATCATCCTTTGGGGGTGGCAATAAAGGTAAGGAAAATGCTAAAGGAAACCTTAGAGTTTTCAAAAGAACACGTTCCATAAGTGCTGTTGTACAGGAAGCTAAAGACATCCTTGAAGTGCCTTCTGAAAGAGAGATTAATGAGTCAGACAATGTAAAGGAACCTGAACATGAAACTCT
TGTGAACTCAACTGGTAATGGGGATACTCCATTGAATGGAGAAGAGGCAAGGAGGGATAAAGCAGAATTTGCTCAGGAAATTGATGAAGAAAGGGAGGACTCAATTGATAATGGTAAAATGAATTTGCATCCTGGACGGAAGAGACGCCACAGGTATTCCTCTCGGGAGACAAGTGAACACGATACTGAGGTTGTTGAAA
TTGAGTGTGACCTTACTAGTGCAGGGCATAGAAAGAGACATCAGCGAGAGACCACAGTTAGCCCAGGATTGGGAACTCCTAATGGGAAGCGCTATAATTTTAGAGAGTCCACCATTGCCAGTATGGTTTCTCTGCACACAGCATCTGCTGAGTGCAAAGACAAGGATGATCCCCATGGGGAAGAAAAAGATCCAAAGAAT
TCCGTTGAAAATAATTTGGAAGAAGTTAGCAAGGAGCCTGGGGAAGGCCTTCAATACAATGTTACGAAAGCAAGTCTGGCTGAAGTAAAGTTCAAAGTGCTTCCCCAAGGAAAGAAGCAAATTATGAAGAGATCCCAGCAGAAAACGTTAGAAGAGTTTGGAGGGGAACTTCTGGAAGGTTATTCACGTGAGCTTACAAG
AGTACCTGTTTCCAGAGTCGACGAAGAGGATCATGAAGTTTATTCACAAGAGCTGACAATGTCTGAGACAGGCGAACTCTATGATGAGAGCAATGAGAATGAAGGCAACAATGATGATGATGCTGAAACATTTGTTGGGACAGAACAAGATGATGAAGACGATGACGAGGAGCAGAAATCCCTGAAAGCGAAGTTATGGA
ATTTCTTAACCACATAATGAGTGAAAAAAATCCACTATCAAAGGATGTTGAATTTCTCCTTGGAGGTGAGAGTAGTCGTTATACACTTTTTTGTTGTCGAAGTGATACAGTAGAAAGTGCCTTGTCCTGGAAATTCTCAGCACTCTCGCAAATGCACAATCCATCTTTGTTGCTGCTTCTGAATTTGAGTCTTGCGCGCT
AGTCTTCTCATGTAAACATGTAATATTTCGGCCTGTATAATTGTTTGTCATTGATTTGGAGGTCCTACCGAGTTGAGTGTTAATATGTTATAGCATGTGCAGTCATTATATTGACCATTGTGTCTATCTGCTGTCTAATTGCACAAAGTTCAAATTTCAAGTGATTGCAGTTTCACAGTTCGAGCTCAATGTATTGTCAT
GCACTTGAGTTCAATGTAGTATCATGTGTGGTTGATCGTTTTCTTTGATAGCCTGATACAACCAATGTTGGTTAACCAACTAGTATTTTGTTACGCTTTCCTGTTCTTTTGACTTATTCCTAATGCAT
>TRINITY_DN121549_c1_g1_i1 from sample A3 / Example unspliced isoform:TTGCAGGATTGATAAGAGGGAAAATTGTGAAGACAAAATGGATCAGTTTTTACTGCGTTGCTTTTACCATCCGGGTCAATACAACTCAGAGGCCAACTTCAAAGAGCGAGACAAAAAATTGAAGGAGCATGAGGCTGTTGTTAAATGAGAAGTTACTGTAGACAGGAAAGAGCAAGAGCTACTTGTTCTTCAAGAAAAGC
TTGCAAGTAGGGAACGCgtaagttaattttctgcaagatagcctttttttgtgcatcagtatattcaatcctctttttgagtgccaaacactattgcagcaatgatgcttatccagatcgataaaacagctgaagaagggattgtatatttacttgaactagttattactgtagatatcctattgcttatcgccatttaa
tctcttattttgcaaatgatttattattgtgtgaatgccagGAAGAGATCCAAAGGCTCACTGATGAACACAAGGCTACACTTGAAGCAATCAGAATTGAGTTTGAAGCAGAATTGGAGCAGAAACGCAGGTTATTTGAAGATGAATGGGAAAACAAGGCAAATGCAACTGATTTGAGGGAGCTTGAAATTAATCGCAAA
GAGGAGAAACTAAGTAAAAGGGAAACTCACTTGGAGAAGAAAGCTGAAAAACTAAAAGAGAAGGAAAATGAACTAGACGCAAGGTCAAGGACTTTGAAGGAAAGGGAGAAAACTTATAAGATCGAGGAAAAAGAAATAGAAAATGGAAAGAAAAAGCTGGAGATGGAAAGAAAAGAAATAATCAATGCAAAGCAAGAACT
CCAAAAATTTAAGGCTTCCTTGGAGGAGGAGAGGTGCCAAATTCTCAAGGAACAACAGAGATTAGAGCTCACAAAAAATGAGAGGGATGAGTTGCTGGATCTACAAACCAAATTGAAAGAAGAGATTGATGACTTAAGAGCTCAGAAACAAGAATTATTGAAAGAAGCTGATGAACTGAATGTAGAAAAGGAAAAGTTTG
AGAGGGAGTGGGAAATTCTTGATGAGAAAAGAGAGCAACTCAGGAAGGAACTAGAATGGGTTGACGATGAGAGGAAGAAACTACCAAAATGGATGAAGGATGAAGAAGAAAGATTAAAGAAAGAAAAGATTGTACTGAGGGAAGAAATAAAGCGTGACGCAGAAGCTCTCCGTCTTGAGAAAGAGGCTTTTGAAAGCAGT
ATGCAGCATCAACGAGCAGTATGGTTTGCTGAAGTTCAGAGGGAGCGGGCAGATCTTGTCCGAGATATTGAGTTGCGAACCAGTGGATTGGAAAACAGTATTGAAACGAGACGGGAGGAGTTAGAGAGGCATTACCAGGAAAAAGAATTATCATTTAAAAAAGAGAAAGAGAAAGAAATGCAGTATATTAGTGCACAGAG
GGAACTGTTACATAAGGAAACAGAAGAAATGAAATCAGAAAGACAGAGACTTAAGAGAGAAAGGAAGGAAATTGCCACAAATCAGGAGCACACAGAGAAAGAGTGGTGTGAAATGAAGAAAGATATTGAAGAACTCCAGATCCAAAGAGAGAAGCTTAAGGAACAGCGAGAGTCACTGCACAAAGAGAGGGAAGAACTTC
AAGCAAAGCTTGAAGAACTGAAAAAATTAAAAGACGAGTTAAAAATGACAGAAGAGAGCTTAAAGGTTTCTGAGCAGCAACCATCACAGGTCAATATAAATGACTATGAAGTTATTTCTCCTGGGCATGGCATTTCTCAGGCAGCACTTACACAAAGTGTTGTTGCTATGCCAGAGAATGCAAACATTGAGTTTAATTCT
GGGATATCTCCTGTGAGAACACCTGCAAGTGCCTCAACTCCTAGCCCTTTGGCATGGTTGCAGAAATGTGCTTCAAGACTTTTTAAACCATCCCCTGAGAAAGAGCTTGAATCTATTTTTCAGAAACAAGAAACTGAAAGAGCAGAAAATTTGGTTCCTGAACGAGTACCAGGCGCAGGGATTGACCCTGTGTCCTTTGC
TGGGAGACATAAGGATCATTTAGTTGAAAATGCAAAGCATATTAGTGAGCATATGGATGGTACACTTTATTCGAGGCCTGTTATGAACATAGCCCAGTCTCAATCATCCTTTGGGGGTGGCAATAAAGGTAAGGAAAATGCTAAAGGAAACCTTAGAGTTTTCAAAAGAACACGTTCCATAAGTGCTGTTGTACAGGAAG
CTAAAGACATCCTTGAAGTGCCTTCTGAAAGAGAGATTAATGAGTCAGACAATGTAAAGGAACCTGAACATGAAACTCTTGTGAACTCAACTGGTAATGGGGATACTCCATTGAATGGAGAAGAGGCAAGGAGGGATAAAGCAGAATTTGCTCAGGAAATTGATGAAGAAAGGGAGGACTCAATTGATAATGGTAAAATG
AATTTGCATCCTGGACGGAAGAGACGCCACAGGTATTCCTCTCGGGAGACAAGTGAACACGATACTGAGGTTGTTGAAATTGAGTGTGACCTTACTAGTGCAGGGCATAGAAAGAGACATCAGCGAGAGACCACAGTTAGCCCAGGATTGGGAACTCCTAATGGGAAGCGCTATAATTTTAGAGAGTCCACCATTGCCAG
TATGGTTTCTCTGCACACAGCATCTGCTGAGTGCAAAGACAAGGATGATCCCCATGGGGAAGAAAAAGATCCAAAGAATTCCGTTGAAAATAATTTGGAAGAAGTTAGCAAGGAGCCTGGGGAAGGCCTTCAATACAATGTTACGAAAGCAAGTCTGGCTGAAGTAAAGTTCAAAGTGCTTCCCCAAGGAAAGAAGCAAA
TTATGAAGAGATCCCAGCAGAAAACGTTAGAAGAGTTTGGAGGGGAACTTCTGGAAGGTTATTCACGTGAGCTTACAAGAGTACCTGTTTCCAGA