NA ----> NA
Intron 1 GCACACATGG ... TCATTTCGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.78 | 30 | 14 | 18 |
| A2 | 27.27 | 24 | 13 | 5 |
| A3 | 26.83 | 15 | 8 | 3 |
| A4 | 22.03 | 23 | 6 | 7 |
| A5 | 21.43 | 11 | 2 | 4 |
| A6 | 26.2 | 138 | 49 | 49 |
| A7 | 22.02 | 147 | 38 | 45 |
| A8 | 23.95 | 154 | 43 | 54 |
| A9 | 22.14 | 160 | 47 | 44 |
| A10 | 24.65 | 162 | 52 | 54 |
>TRINITY_DN33894_c0_g1_i4 from sample A6 / Example spliced isoformCATATTGTAGTTTCTTTGATTCTATCTACGGGCAGCCTAAACAAAACTTTTTATTTTAAAATAAAAAGACGATTTACATTTTAAGGCCATTTTTGGGATCGGCAAGGTCGAATGCGGGAAACACTTTAGACGATACCTGACCACCGATCGAGCCCTATCCCGACAATGGCCACCGTTCATAATTAAGGAACGTATTCATA
ATCAAGAATTAAATTGGAGATGGAAGAGAGTTCTTTACTGTTCTTTACTCATGGTGCAAGGTTCTTAAAATTCCAAAAGCTCTGCCATGGATGGCCAAAGTCCAATGCAATTTTGTCCACTTGAAATTAACCCTACCCATATGTGTCGGTTTTCAATATTTTCCAAGAGTTCTAGACTTCTGTTGCATAGACACGGAAAT
CAATGGTGAGGCAAAGACAGCAAGCGCTCGAGAACAATGGATGGCCTGCGGCTGTACCTTTGTTTTTTAAAGCGACGTTGTTTCTGTGGTTGTTATCTTTAATCATGGCTATGAAAATAGAGGGAAGAACAAACCTCTGGCCAATTTTAGCAGGATGCATGTTTTATCAGACGGCCAATTATGCTGTCAAAGTTTGGCTT
TCTAAAGATCCCCTCTTTATCAACACAGCTGTTTCTCTGCTTCACTCCACCATTACTTCTGCTTCAGTTGCATTCCATCTTCTTGCATCTACGAAGAGTTCTGCGAATGTCAGGACTAAGAAGAGAAAGGAGCTTGAGAACAAGAATAGAATGGGGAATTCATTGGTTCACTTTCTTTATAGCCCGACTCTTTGTACACT
GGTTCATTACATACAAGCTAATCAAAGATGCTTCCAAGTTCCCTCGTGGAATAGAGCTACCTCTTGCATTTTTAGGCATGGTTGGAATGAATGTACTCAATATTTTTCTTGGGTTTGATATTTTCAAAGCATGCAAGAAGGAACTTATTGGAGCTTCATAATACTTCGTTATTACAAGGCATACCAGTAGGAGCAAGATT
TCATGTATCTATCCTCCTTTGAAAAAGTTTACATTGTGAAATTTACTCCAAGTCTGATTATTTTTTCAGCAGCCAGGAATTTAGGACCGAACTCTCCTGGATCACAAGGGAGCAGTAAAATAATTGAAAGTATTTTTCCAATCTTTAGTAATTTTATTCAAAGATTTGTCACATCAAATTTGGTATTAAAGCTCGTAAAT
ATATTTCTTAATTTGCTT
>TRINITY_DN33894_c0_g1_i1 from sample A6 / Example unspliced isoform:CATATTGTAGTTTCTTTGATTCTATCTACGGGCAGCCTAAACAAAACTTTTTATTTTAAAATAAAAAGACGATTTACATTTTAAGGCCATTTTTGGGATCGGCAAGGTCGAATGCGGGAAACACTTTAGACGATACCTGACCACCGATCGAGCCCTATCCCGACAATGGCCACCGTTCATAATTAAGGAACGTATTCATA
ATCAAGAATTAAATTGGAGATGGAAGAGAGTTCTTTACTGTTCTTTACTCATGGTGCAAGGTTCTTAAAATTCCAAAAGCTCTGCCATGGATGGCCAAAGTCCAATGCAATTTTGTCCACTTGAAATTAACCCTACCCATATGTGTCGGTTTTCAATATTTTCCAAGAGTTCTAGACTTCTGTTGCATAGACACGGAAAT
CAATGGTGAGGCAAAGACAGCAAGCGCTCGAGAACAATGGATGGCCTGCGGCTGTACCTTTGTTTTTTAAAGCGACGTTGTTTCTGTGGTTGTTATCTTTAATCATGGCTATGAAAATAGAGGGAAGAACAAACCTCTGGCCAATTTTAGCAGGATGCATGTTTTATCAGACGGCCAATTATGCTGTCAAAGTTTGGCTT
TCTAAAGATCCCCTCTTTATCAACACAGCTGTTTCTCTGCTTCACTCCACCATTACTTCTGCTTCAGgcacacatggacacggaccttgacctgggctgtaaatcaattcacctctgtcagtgcaacaagaagaaattagagtggggaatgtagggtggagattagggttgaagacctggagctgtgtcggagctcctag
gattttgttgtgctgtttctcccatagtggaatgaaactatgaggacctgtgtgctgtgactagcagaaatcggatttgaatcatcttcatttcgagTTGCATTCCATCTTCTTGCATCTACGAAGAGTTCTGCGAATGTCAGGACTAAGAAGAGAAAGGAGCTTGAGAACAAGAATAGAATGGGGAATTCATTGGTTCA
CTTTCTTTATAGCCCGACTCTTTGTACACTGGTTCATTACATACAAGCTAATCAAAGATGCTTCCAAGTTCCCTCGTGGAATAGAGCTACCTCTTGCATTTTTAGGCATGGTTGGAATGAATGTACTCAATATTTTTCTTGGGTTTGATATTTTCAAAGCATGCAAGAAGGAACTTATTGGAGCTTCATAATACTTCGTT
ATTACAAGGCATACCAGTAGGAGCAAGATTTCATGTATCTATCCTCCTTTGAAAAAGTTTACATTGTGAAATTTACTCCAAGTCTGATTATTTTTTCAGCAGCCAGGAATTTAGGACCGAACTCTCCTGGATCACAAGGGAGCAGTAAAATAATTGAAAG