sp|Q9S7X6|ACL5_ARATH ----> Thermospermine synthase ACAULIS5
Intron 1 GTGACGAATT ... TTTGACGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.67 | 10 | 1.6 | 2 |
| A2 | 42.11 | 22 | 4.4 | 16 |
| A3 | 27.5 | 29 | 3.6 | 11 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 8.33 | 22 | 4.4 | 2 |
| A6 | 9.23 | 59 | 5.6 | 6 |
| A7 | 17.65 | 14 | 4.2 | 3 |
| A8 | 14.29 | 18 | 3.2 | 3 |
| A9 | 18.6 | 35 | 7 | 8 |
| A10 | 33.33 | 8 | 0.4 | 4 |
>TRINITY_DN106436_c0_g1_i4 from sample A2 / Example spliced isoformCCCTTTGGAAAGGTAAATATAGTACGCAGCACGCTATCTAGAAATATATAAAATAAAGATTGTGAATTACCTTTTCTCTGAACGTCGATAAGCCTTGCGTTGATCTGGTGTGCAGGCGCTTGTTATAGACGGAAAGTTACAAAGCGCAGAAGTGGACGAGTTTATCTATCACGAATTGCTAGTGCATCCGGCGCTCGTCT
GCCACCCGAACCTCAAAGCGTTTTCATCATGGGAGGCGGCGAAGGCTCCACAGCTCGGGAGGTATTACGGCACAAGAACGTCAAGAAAGCGGTCATGTGTGACATCGATAAGGAAGTTGTTGATTTCTGCCGCAAATACCTTGTTGTGAACCGAGAAGCGTTCTGCAGTTCCCGCCTTGACCTCGTTATCAATGACGCTA
GGGTTGAGCTCGAGAGCAGAGATGAACGATTCGACGTCATAATAGGTGACCTCGCAGATCCCGTGGAAGGAGGTCCGTGTTATCAATTGTACACAAAGTCTTTCTATGAGCTCGTCCTAAAGCCAAAGCTGAGCCACAGAGGAGTGTTCGTTACTCAGGCTGGACCCGCAGGCGTCTTAACGCATACAGAGATATTCTCA
TCCATATACAACACGTTAAGACAGGTTTTCAAGTATGTGGTGCCCTACACTGCTCACATTCCGTCCTTCGCCGACACATGGGGATGGGTCATGGCATCGGATCATCCGCTTACAATAGACGCCGAAGAAATCGACAGCAGAATAAAGCAGAGAATCAAAGGGGACCTGCGGTTTCTTGACGGAGAAACTTTCATGGCGGC
GTCCACATTGAATAAAAGTGTCCGCACTTCGTTGTTGAAGGAAACTCATGTATATACAGAAGAGACGGCCCGATTCCTGTATGGCCACGGAAAGGCGTGCCAGAAATCAAACCCTTCTCTTCCACAGAAATAAAACATAATTAGTGTACACAGACTTCTTTTTGTTTTAATTCGACGGGGGGATTTTGTTATATTTAAAA
GCTGGCGAAGTGCTCTTCGCACAAAGTCAAGCGCATGGGGAATCGCTATGTTTTCGGCATTTATATATTACATAAAATATTTATATGTTTGTGGAAAGGTCGGTTGCTTTTACCTTTTGTTTTTAATTTATAAAGTGTTATCATTGAATAATGTCAATGCCTTGTAAGTGTTCCCATAAA
>TRINITY_DN106436_c0_g1_i1 from sample A2 / Example unspliced isoform:AGGCGCTTGTTATAGACGGAAAGTTACAAAGCGCAGAAGTGGACGAGTTTATCTATCACGAATTGCTAGTGCATCCGGCGCTCGTCTGCCACCCGAACCTCAAAGCGTTTTCATCATGGGAGGCGGCGAAGGCTCCACAGCTCGGGAGGTATTACGGCACAAGAACGTCAAGAAAGCGGTCATGTGTGACATCGATAAGG
TCTAACCGCGCGCCTCCGTGATTTTCTTGTTTTATTGCTTTTCTTTTGAATATTTTTGGACCTAAAGAAAAAGCTGCTAGCAGGAAGTTGTTGATTTCTGCCGCAAATACCTTGTTGTGAACCGAGAAGCGTTCTGCAGTTCCCGCCTTGACCTCGTTATCAATGACGCTAGgtgacgaatttttagtgcttcattttct
caaacaatacttcttaggttgataatagagtttaaagctttaatcgaaattgtttgacgcagGGTTGAGCTCGAGAGCAGAGATGAACGATTCGACGTCATAATAGGTGACCTCGCAGATCCCGTGGAAGGAGGTCCGTGTTATCAATTGTACACAAAGTCTTTCTATGAGCTCGTCCTAAAGCCAAAGCTGAGCCACAG
AGGAGTGTTCGTTACTCAGCTTTAACAAAAACGGAAAATCGAGACAGCGAGGAGACTGAAGTTGCTGAAATCAACCCGGC
Intron 2 GTCTAACCGC ... CTGCTAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 7.14 | 13 | 2 | 0 |
| A2 | 24.14 | 11 | 5 | 2 |
| A3 | 6.38 | 22 | 1 | 2 |
| A4 | 25 | 3 | 2 | 0 |
| A5 | 12.2 | 18 | 3 | 2 |
| A6 | 1.1 | 45 | 1 | 0 |
| A7 | 0 | 11 | 0 | 0 |
| A8 | 0 | 13 | 0 | 0 |
| A9 | 1.96 | 25 | 0 | 1 |
| A10 | 0 | 2 | 0 | 0 |
>TRINITY_DN106436_c0_g1_i4 from sample A2 / Example spliced isoformCCCTTTGGAAAGGTAAATATAGTACGCAGCACGCTATCTAGAAATATATAAAATAAAGATTGTGAATTACCTTTTCTCTGAACGTCGATAAGCCTTGCGTTGATCTGGTGTGCAGGCGCTTGTTATAGACGGAAAGTTACAAAGCGCAGAAGTGGACGAGTTTATCTATCACGAATTGCTAGTGCATCCGGCGCTCGTCT
GCCACCCGAACCTCAAAGCGTTTTCATCATGGGAGGCGGCGAAGGCTCCACAGCTCGGGAGGTATTACGGCACAAGAACGTCAAGAAAGCGGTCATGTGTGACATCGATAAGGAAGTTGTTGATTTCTGCCGCAAATACCTTGTTGTGAACCGAGAAGCGTTCTGCAGTTCCCGCCTTGACCTCGTTATCAATGACGCTA
GGGTTGAGCTCGAGAGCAGAGATGAACGATTCGACGTCATAATAGGTGACCTCGCAGATCCCGTGGAAGGAGGTCCGTGTTATCAATTGTACACAAAGTCTTTCTATGAGCTCGTCCTAAAGCCAAAGCTGAGCCACAGAGGAGTGTTCGTTACTCAGGCTGGACCCGCAGGCGTCTTAACGCATACAGAGATATTCTCA
TCCATATACAACACGTTAAGACAGGTTTTCAAGTATGTGGTGCCCTACACTGCTCACATTCCGTCCTTCGCCGACACATGGGGATGGGTCATGGCATCGGATCATCCGCTTACAATAGACGCCGAAGAAATCGACAGCAGAATAAAGCAGAGAATCAAAGGGGACCTGCGGTTTCTTGACGGAGAAACTTTCATGGCGGC
GTCCACATTGAATAAAAGTGTCCGCACTTCGTTGTTGAAGGAAACTCATGTATATACAGAAGAGACGGCCCGATTCCTGTATGGCCACGGAAAGGCGTGCCAGAAATCAAACCCTTCTCTTCCACAGAAATAAAACATAATTAGTGTACACAGACTTCTTTTTGTTTTAATTCGACGGGGGGATTTTGTTATATTTAAAA
GCTGGCGAAGTGCTCTTCGCACAAAGTCAAGCGCATGGGGAATCGCTATGTTTTCGGCATTTATATATTACATAAAATATTTATATGTTTGTGGAAAGGTCGGTTGCTTTTACCTTTTGTTTTTAATTTATAAAGTGTTATCATTGAATAATGTCAATGCCTTGTAAGTGTTCCCATAAA
>TRINITY_DN106436_c0_g1_i1 from sample A2 / Example unspliced isoform:AGGCGCTTGTTATAGACGGAAAGTTACAAAGCGCAGAAGTGGACGAGTTTATCTATCACGAATTGCTAGTGCATCCGGCGCTCGTCTGCCACCCGAACCTCAAAGCGTTTTCATCATGGGAGGCGGCGAAGGCTCCACAGCTCGGGAGGTATTACGGCACAAGAACGTCAAGAAAGCGGTCATGTGTGACATCGATAAGg
tctaaccgcgcgcctccgtgattttcttgttttattgcttttcttttgaatatttttggacctaaagaaaaagctgctagcagGAAGTTGTTGATTTCTGCCGCAAATACCTTGTTGTGAACCGAGAAGCGTTCTGCAGTTCCCGCCTTGACCTCGTTATCAATGACGCTAGGTGACGAATTTTTAGTGCTTCATTTTCT
CAAACAATACTTCTTAGGTTGATAATAGAGTTTAAAGCTTTAATCGAAATTGTTTGACGCAGGGTTGAGCTCGAGAGCAGAGATGAACGATTCGACGTCATAATAGGTGACCTCGCAGATCCCGTGGAAGGAGGTCCGTGTTATCAATTGTACACAAAGTCTTTCTATGAGCTCGTCCTAAAGCCAAAGCTGAGCCACAG
AGGAGTGTTCGTTACTCAGCTTTAACAAAAACGGAAAATCGAGACAGCGAGGAGACTGAAGTTGCTGAAATCAACCCGGC