sp|Q9LT75|PTN2A_ARATH ----> Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A
Intron 1 GTAAGTTCTA ... ATTGTCGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.1 | 288 | 0 | 68 |
| A2 | 14.23 | 205 | 2 | 34 |
| A3 | 15 | 255 | 1 | 45 |
| A4 | 14.88 | 206 | 2 | 36 |
| A5 | 14.77 | 127 | 7 | 22 |
| A6 | 15.01 | 317 | 0 | 56 |
| A7 | 14.52 | 577.3 | 0 | 98 |
| A8 | 15.96 | 379 | 0 | 72 |
| A9 | 16.26 | 535.8 | 0 | 104 |
| A10 | 13.4 | 465.3 | 0 | 72 |
>TRINITY_DN100889_c1_g5_i3 from sample A4 / Example spliced isoformGTGAGAAACAGGGGAATTTATGTTGTTACCAGGGGAATTGTGCTTTCTGCTTAGTTCTTTCAATCATAAATGAATAATTGTGAATTATGTTTAGCTTTGTTCTCTGATACAAATGCTATTGGTTTTTGCTAGGGGAATTGTGCATTCTGCTTAGTTCTTTCAATCATAAATGAATAATTGTGAATTATGTTTAGCTTTGT
TCTCTGATACAAATGCTATTGGTTTTTGCTCTTCTTTCATAAATTTGGTGTGTATCCAGTAGGCACAACTGCTACATCTTCTAATTAGCATGCCATGTGTTGAAGATTGATGGTCACCAGTGGTTCTAGACCGGTTATATAATCTATATGCTGCATTATACTTTGAACTTCATGAGGTTGTATTATTAGATGTGGATGTA
GGCTGAAGATGCCACTGTCCTTGGATATCTCAAATTTCAACGATGTATATTTATATTCTATCGATGTTGAAAAAGTTGTTTAGTGGTCATATTCTTTTTCTTGAAAGTGTGTGGAATCAGGGAATTTTTTGAATGTTTATCACAACTACTTGGTAATCTCTTATTTTAGTTAGTCTGGTTTTATCCTTTAATGAGTAAGA
AATTGTGTGTATCTATAATTTCTATAACTAGAAATATCTGTTAATATCTCTACAACTATAGCTGAGATTCTGCTATTAGCTTAAGAAGTGCTAGTTTTTTATTGGCATATTGGTCTCAATATAGTATCTGGGAGTATGAAAGATGTGTTTGTGCCAGAGCACTTTATTTATTAAAACATAATTAAGGTAGACAGTTGTTT
TGATAGGAGTGCTGCCCTCTTATACTCTAGTTTCACTGATATCAGATATGTTTTCTTGCTTATTAATAGGTTGCTTCCTTCCCCTTTGATGATCATAATTGCCCTCCAATTCAACTTGTAGTATCATTTTGTCAAAGTGCATACTCATGGCTGAAGGAAGACATTGAGAATGTAGTTGTCGTTCATTGTAAAGCTGGCAT
GGCTAGAACAGGGCTCATGATATCAAGCCTTCTTCTTTACCTCAAGTTCTACCCCACTGCTGAAGAATCCATTGCATATTACAACCAGAAACGCTGTATAGATGGCAAGGGTCTTGTTCTTCCAAGCCAAATTCGCTATGTAAAATATTTTGAACGAGTTCTCACGTATTTCAATGGTGAAGTTCAACCTGGTAGGAGAT
GTATACTTCGGGGATTTCGTCTTCACAAATGCCCTTACTGGGTTCGACCATCTATTACAGTGTCTGATCATAATGGAATTCTCTTTTCAACAAAAAAGCATCCAAGGACAAAGGATATGATGCCGGATGATTTTTGGTTTAGTGCACCAAGGAAAGGAATCATGGTATTTGCTTTACCAGGCGAAAGGGGTCTGACAGAG
TTAAGCGGTGACTTCAAGGTTCACTTTCATGATCGCCATGGTGATTTTTACTGTTGGTTGAACACAACAATGATGGAGAACAGGCAAATTCTGAACACTGCTGATCTTGATGGTTTTGACAAGAGGAAACTGCCCTGTCCAGGGTTTCAAGTTGAGGTGGTGGTGATGGATCACGATGCTCCATTACCTTCCAAATCTAG
TGGTGGCACAGTGACTGGTATCATCAGTCCAAGTGTGTTAGAAGGAAGACCGACTCAGATGAGTGACAGCAAAGAACCTACTGTGTCAATGAAAGACAATGAAGGCCAAGAAAAAGATGACATATTTTCTGACAGTGAAACTGAAGAAAATGGATTTTCAAAGATGAGACGGGAAAACCACCCTCATATGGAAGAATCTG
GTGTTGTATCTAATGATTCTACTGAAATATCTAAAGAACCAGTAGTGGAAAAGAACAATTTGGTAAATATTACACATGGCATTGAATCATCCTGCCAAGTATCTCCGAAAAATGAACCAAGTCCAGATGAAACCAATGCAAGTAAAGAACATAATTCAAATCAGAAAGATTCTCAAGGTGATCCTAAAAGTGGAAAAAAT
CAGGGTGATGGCTCTGGCAGTTCAGAGCCAGTGTATATACAAGAGGCTGGGAAGTCGGACACAGTGATAGCAAGTGATTTTAAGGCCATTGCTGCAGATGCATCGGTTTTCACATTTGGTGATGAAGAGGACTATGAAAGTGACTAATTGGTAAAATATATTTGCAGAGGAGATTCTGACTAAATAATTGATTGGTTATG
ACAAATAAGGCTTGGTTCCAAAAACCTTGTATAGCAAGCAAAATTATGACCTTGCAGTTTCTCCAATTAGTATGTGTAAAGTACTGCATCTTCTAGGAACATGGATGTTTTCTCGTCCCAACAAAGCCTGAAATTCTTGATTGTAGCATATGTTTGATTTTTGTTATGAAAGGATTGTGCGTTCTGCTGTATCTATTCGA
TAGGAAGCCATGCCTATAATTGGTACTTAAATGTTTTAATACGGTGTTCAACACTTTGTTAGGCATGTTATCCTTGGTAGA
>TRINITY_DN100889_c1_g5_i7 from sample A4 / Example unspliced isoform:GTCTTGTTCTTCCAAGCCAAATTgtaagttctatttattttattttattatttttctgtagattgatttccttgactactaaggtcaatgagttttcatttagaacattgaggatttttatgattaggactgtctgtatgtgcttatatttcagttttctctaaccattgtcgcagCGCTATGTAAAATATTTTGAACGA
GTTCTCACGTATTTCAATGGTGAAGTTCAACCTGGTAGGAGATGTATACTTCGGGGATTTCGTCTTCACAAATGCCCTTACTGGGTTCGACCATCTATTACAGTGTCTGATCATAATGGTATGTGGTATAC
Intron 2 GTAATAGTTA ... TATCATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.91 | 367 | 103 | 16 |
| A2 | 20 | 328 | 82 | 4 |
| A3 | 19.41 | 299 | 72 | 4 |
| A4 | 21.48 | 318 | 87 | 9 |
| A5 | 17.71 | 144 | 31 | 2 |
| A6 | 13.15 | 251 | 38 | 0 |
| A7 | 15.79 | 592 | 111 | 2 |
| A8 | 15.67 | 253 | 47 | 0 |
| A9 | 18.32 | 597.5 | 134 | 1 |
| A10 | 17.85 | 612 | 133 | 0 |
>TRINITY_DN116046_c0_g1_i1 from sample A1 / Example spliced isoformATCCATAGAAACAGGTGGGACTGCAATAAGTTTATCTGCAGATGAGACGGAATTTAAAGAGAATGTGAGTGTAATGAGATGATTAAATAGAATGTGATAGTGGCGTCGTGGGATCCTTCCTTCCAAGGCGGAAAGGCCGTAGCAAACAAGTTCCAATTGCAGAGTCTGCGTGATCGAAACTTTCCAGCAATACGTACTAC
AATACCATCCTTGATCTGCGATATCAACCTCTAAAGTCATACGGACCTGAAGAAGAAGCTGTTCACAAGTGACCCTACAACAGTGATATTGTCCTCCTGCATAGTGCTTTAAAGATACCTTCTTATATAGAAATAAGAGGTCAGCAGTACTTCAAATGAAATGGAGACTGACAGGGCTGAAGGTTCAGATCCCGCTCCGT
TAGGCGCAAGTTCTAAATTGCCTCCTCTAGAAGTTCCCGCACCAGATCCCACTCTTCAGTCATCTAATGATCATTCAACATTGAGGTTTTCACCTTCTGGTTTTTCAACATGGGCAAAAAGCTTTAAATTTTCACAATCCTCAGCTCCAGAGAATGCACAGCCTGTGGATGGTAGGAAATCTCCATTTGGCCGCTTAGCC
AGTGGATTAGGTATACGTACATCTTCTAAGATTCCAGTTGTCGATGATCCTACAGAAGATTCAACACAAGTTACAGTCACGCAGGAAAGTCCACTTGGGAGCATCACAAAGGGATTCCTGGACACATCAAAAAATGCAATGAGGGCTGTTCAAACCAAAGCTCGGCACATTGTGTCACAGAACAAAAGGAGATATCAGGA
AGGTGGTTTTGATTTGGATATGACATATATTACTGAAAACATAATTGCCATGGGATTTCCTGCTGGAGACATCAGTTCTGGTATTTTTGGATATGTGGAGGGGTTTTATCGGAATCATATGGAAGAAGTTATCAAGTTTTTTGAAAGTCATCACAAGGGAAAATACAAAGTGTACAACCTTTGCTCTGAAAGACTATATG
ATGCTTCACTGCTTGAAGGGAAGGTTGCTTCCTTCCCCTTTGATGATCATAATTGCCCTCCAATTCAACTTGTAGTATCATTTTGTCAAAGTGCATACTCATGGCTGAAGGAAGACATTGAGAATGTAGTTGTCGTTCATTGTAAAGCTGGCATGGCTAGAACAGGGCTCATGATATCAAGCCTTCTTCTTTACCTCAAG
TTCTACCCCACTGCTGAAGAATCCATTGCATATTACAACCAGAAACGCTGTATAGATGGCAAGGGTCTTGTTCTTCCAAGCCAAATTCGCTATGTAAAATATTTTGAACGAGTTCTCACGTATTTCAATGGTGAAGTTCAACCTGGTAGGAGATGTATACTTCGGGGATTTCGTCTTCACAAATGCCCTTACTGGGTTCG
ACCATCTATTACAGTGTCTGATCATAATGGAATTCTCTTTTCAACAAAAAAGCATCCAAGGACAAAGGATATGATGCCGGATGATTTTTGGTTTAGTGCACCAAGGAAAGGAATCATGGTATTTGCTTTACCAGGCGAAAGGGGTCTGACAGAGTTAAGCGGTGACTTCAAGGTTCACTTTCATGATCGCCATGGTGATT
TTTACTGTTGGTTGAACACAACAATGATGGAGAACAGGCAAATTCTGAACACTGCTGATCTTGATGGTTTTGACAAGAGGAAACTGCCCTGTCCAGGGTTTCAAGTTGAGGTGGTGGTGATGGATCACGATGCTCCATTACCTTCCAAATCTAGTGGTGGCACAGTGACTGGTATCATCAGTCCAAGTGTGTTAGAAGGA
AGACCGACTCAGATGAGTGACAGCAAAGAACCTACTGTGTCAATGAAAGACAATGAAGGCCAAGAAAAAGATGACATATTTTCTGACAGTGAAACTGAAGAAAATGGATTTTCAAAGATGAGACGGGAAAACCACCCTCATATGGAAGAATCTGGTGTTGTATCTAATGATTCTACTGAAATATCTAAAGAACCAGTAGT
GGAAAAGAACAATTTGGTAAATATTACACATGGCATTGAATCATCCTGCCAAGTATCTCCGAAAAATGAACCAAGTCCAGATGAAACCAATGCAAGTAAAGAACATAATTCAAATCAGAAAGATTCTCAAGGTGATCCTAAAAGTGGAAAAAATCAGGGTGATGGCTCTGGCAGTTCAGAGCCAGTGTATATACAAGAGG
CTGGGAAGTCGGACACAGTGATAGCAAGTGATTTTAAGGCCATTGCTGCAGATGCATCGGTTTTCACATTTGGTGATGAAGAGGACTATGAAAGTGACTAATTGGTAAAATATATTTGCAGAGGAGATTCTGACTAAATAATTGATTGGTTATGACAAATAAGGCTTGGTTCCAAAAACCTTGTATAGCAAGCAAAATTA
TGACCTTGCAGTTTCTCCAATTAGTATGTGTAAAGTACTGCATCTTCTAGGAACATGGATGTTTTCTCGTCCCAACAAAGCCTGAAATTCTTGATTGTAGCATATGTTTGATTTTTGTTATGAAAGGATTGTGCGTTCTGCTGTATCTATTCGATAGGAAGCCATGCCTATAATTGGTACTTAAATGTTTTAATACGGTG
TTCAACACTTTGTTAGGCATGTTATCCTTGGTAGAGTCTTTTGGTTGTCTA
>TRINITY_DN116046_c0_g1_i5 from sample A1 / Example unspliced isoform:ATCCATAGAAACAGGTGGGACTGCAATAAGTTTATCTGCAGATGAGACGGAATTTAAAGAGAATGTGAGTGTAATGAGATGATTAAATAGAATGTGATAGTGGCGTCGTGGGATCCTTCCTTCCAAGGCGGAAAGGCCGTAGCAAACAAGTTCCAATTGCAGAGTCTGCGTGATCGAAACTTTCCAGCAATACGTACTAC
AATACCATCCTTGATCTGCGATATCAACCTCTAAAGTCATACGGACCTGAAGAAGAAGCTGTTCACAAGTGACCCTACAACAGTGATATTGTCCTCCTGCATAGTGCTTTAAAGATACCTTCTTATATAGAAATAAGAGGTCAGCAGTACTTCAAATGAAATGGAGACTGACAGGGCTGAAGGTTCAGATCCCGCTCCGT
TAGGCGCAAGTTCTAAATTGCCTCCTCTAGAAGTTCCCGCACCAGATCCCACTCTTCAGTCATCTAATGATCATTCAACATTGAGGTTTTCACCTTCTGGTTTTTCAACATGGGCAAAAAGCTTTAAATTTTCACAATCCTCAGCTCCAGAGAATGCACAGCCTGTGGATGGTAGGAAATCTCCATTTGGCCGCTTAGCC
AGTGGATTAGGTATACGTACATCTTCTAAGATTCCAGTTGTCGATGATCCTACAGAAGATTCAACACAAGTTACAGTCACGCAGGAAAGTCCACTTGGGAGCATCACAAAGGGATTCCTGGACACATCAAAAAATGCAATGAGGGCTGTTCAAACCAAAGCTCGGCACATTGTGTCACAGAACAAAAGGAGATATCAGGA
AGGTGGTTTTGATTTGGATATGACATATATTACTGAAAACATAATTGCCATGGGATTTCCTGCTGGAGACATCAGTTCTGGTATTTTTGGATATGTGGAGgtaatagttaaagaacagaagcctttgaatttttttctgtactatgtaaaatattgagctctagtgtttgtccttttaactttttaagtagtcttgtgaa
taactgttccaaccattgagagctattctgcttctttgttaaaagtcaaactatggaaattatcatgcagGGGTTTTATCGGAATCATATGGAAGAAGTTATCAAGTTTTTTGAAAGTCATCACAAGGTAATCGGCAGAATCTATCCATGCTTCTTTTTGTTTATTTCTTTAAGGGACACTAGTAGGTGGTGTGCTGTAT
GAGCTTCTGTTTGTTTGGATGGGTTTACAAGATTTTTGTATTTTCAATCTCTTTGGGATATTTGTTATTTTGCCCAGAAAGACTGAAGTTGCGCTTCAGAGTGTCATCTGGTTTTCAGGATTGGTACTATTAAGCTAAGATTATGTAAATACATTTTTGTTTGGATGGGTATACAAGATTTTGTATTTTCAATCTCTTTT
GGATATTTGTTATTTTGTCCAGAAAGACTGAAGTTGTGCTTCAGATTGTCATCTAGTTTGCAGGATTGGTACTTATAAGCAAAGATTACGTAAATGCATATCCTGAATCTTAAATCAACTTGTATATCCTTAGACCTAAAAATCCAGAATCCTGTTGCACATTGAATAATTTAAGAATGTTCTCATTGCTCAAAGCTAAA
AGAAACAACTAGATGACTTAACTGAGAGGACTGCGGAGCATTTCCTCATCAAGTTACTGTGAATTGAATGATCTGAGAACGATGAACTTAAAATTGTTCCCAACTCTTGGTATTATTTGTTTACCTCTAGATGATCAAGTTAAAC