NA ----> NA
Intron 1 GTGATATTTA ... TACAATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.1 | 39 | 11 | 18 |
| A2 | 15.79 | 32 | 1 | 11 |
| A3 | 30.67 | 26 | 7 | 16 |
| A4 | 30.61 | 17 | 5 | 10 |
| A5 | 9.09 | 5 | 0 | 1 |
| A6 | 11.11 | 4 | 1 | 0 |
| A7 | 6.38 | 22 | 1 | 2 |
| A8 | 17.46 | 26 | 1 | 10 |
| A9 | 17.86 | 23 | 5 | 5 |
| A10 | 10.34 | 39 | 6 | 3 |
>TRINITY_DN122428_c0_g1_i8 from sample A3 / Example spliced isoformGCTTTCTTGTCCGTTTTTCTTATTGTTGTTTGTAGTTGTTTTGTGCTTCAATGGGTGGTGAAATTAAGGCAAGCTCGGATGGCTGATTGGGTTGATGCATATTCCACTAATGTAGTGAGCAAAGAGGCAATGCAGGTATAGAAAGGTAGAAGAGCTGACACCTCTAGATATCTTTGTGTGAGAAAGATGTGGGGCTCTAA
AGTAGACGTAGAGGCAACGGTTGGTACAAAGTTCATAGGTGTGCTTGGTGAAGGTGAAGGTGAAGGCTCAGGATGAGGGGGGTATGTATGGCTCCATATTTGTTTGTTTCAATTAGAGGCGTTTTATATTATTAGTGCAATGCCATGTAAGTAAAGGAAGGAAGATCAAAGTTGGAGGCGCACCAATGAAACAACTGAAA
AATCTTTTTGAGAGAGGACAATGCCCAGTTAGAGGATTCAATAGGTGGTGTAATTAAGCCAAGTCCTCGCTTTAGGGATGATGCTGATTTCACATTACAATGGGTGAAGAGGAAGACCAAGAAAGAGGAGGTGCAAATGTAAGAGGCAGAGGGTGAGTTCTACATTTGTTTATATCAAACCACATTTTGGGATTAGGGCT
GAAGAATATTTACAAGTATAATGTGCGATGAGAAAGCTAAGAAGTAGGAGGTAAGGTAAATGAAGGTGGATGACTGCTAATGAAGCTGCTGAAATGTGTTTGTGTGAGTAACCGTGGGCTAAGAGGTATGCATGGTTTCAAGTGAGTTTGTTTAAATTGGATTCATATTATATTATTTGTCGTTTCTTTATTGTGCAAGA
GGATAAAGGAAGGTGGAGGAGCACTAATGACACATCTGAAATATCCTCATGTGCAGTTTTAAAGGTAGAGGCAGAAGGTAAAGGAAGGTGGATAACTATTGATGAAACCGCTGAAATGCCTTTTTGTAAGAGAGATATGGGCTAGTGACTAAACATAAAGCCATAGCATATGTGGTTGGGAGATTAAGACTTGCCTTAAC
GACCTATTTTGTGGATATAGACAGTTGGAGTGAGTGCAGACAATGCCTAAGGTCAAGGAATGTGGTGGTTCATTTATAAAAACTATTGAAATATCTATGCGAGAGAGATTGCAGTACATTATGCAGAAAGCTGAGGCAAAGGGTGTCATTGGTTGGCCATGGAAGGTTTCCGGGGATGT
>TRINITY_DN122428_c0_g1_i4 from sample A3 / Example unspliced isoform:GCTTTCTTGTCCGTTTTTCTTATTGTTGTTTGTAGTTGTTTTGTGCTTCAATGGGTGGTGAAATTAAGGCAAGCTCGGATGGCTGATTGGGTTGATGCATATTCCACTAATGTAGTGAGCAAAGAGGCAATGCAGGTATAGAAAGGTAGAAGAGCTGACACCTCTAGATATCTTTGTGTGAGAAAGATGTGGGGCTCTAA
AGTAGACGTAGAGGCAACGGTTGGTACAAAGTTCATAGGTGTGCTTGGTGAAGGTGAAGGTGAAGGCTCAGGATGAGGGGGGTATGTATGGCTCCATATTTGTTTGTTTCAATTAGAGGCGTTTTATATTATTAGTGCAATGCCATGTAAGTAAAGGAAGGAAGATCAAAGTTGGAGGCGCACCAATGAAACAACTGAAA
AATCTTTTTGAGAGAGGACAATGCCCAGTTAGAGGATTCAATAGGTGGTGTAATTAAGCCAAGTCCTCGCTTTAGGGATGATGCTGATTTCACATTACAATGGGTGAAGAGGAAGACCAAGAAAGAGGAGGTGCAAATGTAAGAGGCAGAGGGTGAGTTCTACATTTGTTTATATCAAACCACATTTTGGGATTAGGGCT
GAAGAATATTTACAAGTATAATGTGCGATGAGAAAGCTAAGAAGTAGGAGGTAAGGTAAATGAAGGTGGATGACTGCTAATGAAGCTGCTGAAATGTGTTTGTGTGAGTAACCGTGGGCTAAGAGGTATGCATGGTTTCAAGTGAGTTTGTTTAAATTGGATTCATATTATATTATTTGTCGTTTCTTTATTGTGCAAGA
GGATAAAGGAAGGTGGAGGAGCACTAATGACACATCTGAAATATCCTCATGTGCAGTTTTAAAGGTAGAGGCAGAAGGTAAAGGAAGGTGGATAACTATTGATGAAACCGCTGAAATGCCTTTTTGTAAGAGAGATATGGGCTAGTGAGTAAACATAAAGCCATAGCATATGTGGTTGGGAGATTAAGACTTGCCTTAAC
GACCTATTTTGTGGATATAGACAGTTGGAGTGAGTGCAGACAATGCCTAAGgtgatatttatggttccatttgtgtttgttaaattagagggatcgtacattatttgtcatttattgaattattgagtgtgcaatacaatgcagGTCAAGGAATGTGGTGGTTCACTGATAAAAACTATTGAAATATCTATGCGAGAGAG
ATTGCAGTACATTATGCAGAAAGCTGAGGCAAAGGGTGTCATTGGTTGGCCATGGAAGGTTTCCGGGGATGT