sp|P30182|TOP2_ARATH ----> DNA topoisomerase 2
Intron 1 GTAATGCTAG ... AGTTATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 8.88 | 1825 | 43.5 | 178 |
| A2 | 10.8 | 1263 | 31 | 153 |
| A3 | 10.08 | 1342 | 51 | 150.5 |
| A4 | 10.21 | 1263 | 36.5 | 143.5 |
| A5 | 7.92 | 494 | 24 | 42.5 |
| A6 | 11.48 | 54 | 3 | 7 |
| A7 | 10.32 | 504 | 15 | 58 |
| A8 | 10.21 | 110 | 4.5 | 12.5 |
| A9 | 14.47 | 375 | 7 | 63.5 |
| A10 | 10.07 | 594 | 15.5 | 66.5 |
>TRINITY_DN104986_c1_g1_i1 from sample A2 / Example spliced isoformCAGGAATCATTTATGGATATTTGTCAATTCTTTGATTAACAATCCTGCTTTTGACTCCCAAACAAAGGAGACACTGACAACTCGTCAGAACAGCTTTGGTTCAAAGTGTGAACTCTCTCAAGAGTTTTTGAAGAAAGTGTCTAAGTGTGGAGTGGTTGAGAGCATATTATCATGGGCAGATTTCAAACAAAGCAAGGATC
TTAAGAAAACTGATGGAACAAAGAGACAGAGGTTAACTGGTATCACCAAGCTTGATGATGCAAATGATGCAGGGGGCAAGAATTCTGAGAAATGTACTTTAATTTTAACAGAGGGAGATTCGGCCAAGGCCCTTGCTATGGCAGGGTTGGCTGTTGTTGGTCGAAACCACTATGGTGTATTTCCTCTCAGGGGTAAGTTG
CTGAATGTAAGGGAAGCCAGCCATAAACAGATCATGGAGAATGCTGAGATTCAACATATCAAACAAATCCTTGGTCTGCAACATGGCAAGGAATATGACAGTGTCAAGTCTCTGAGATATGGCCATCTGATGATTATGACAGATCAGGATCATGATGGTTCACACATTAAAGGATTGTTGATCAACTTCATACACTCTTT
CTGGCCATCTCTACTCAAGATTCCTTCATTTCTTGTTGAATTCATTACTCCTATTGTCAAGGCAACCCATAAGGATGGGCGGGCATTGTCTTTCTATACCATGCCTGAGTATGAATCATGGAGAGAATCTCTGGGTGGATCAGCATCAGGGTGGACCATAAAGTACTATAAAGGTCTCGGTACAAGTACTTCTAAAGAGG
GGAAAGAATATTTTAAAAATTTGGATAAGCATAAAAAAGATTTCATGTGGATTAATGAGGATGATGGAGATGCAATTGAGTTGGCCTTCAGCAAGAAGAAAATAGAGGCCAGAAAGAACTGGCTAAGACATTTTGAGCCGGGAACATATTTGGACCAGACTGAGAAGCTTATCAAGTACAGTGACTTTGTAAACAAGGAG
CTGATCCTATTTTCCATGGCTGATTTGCAAAGATCCATCCCATCTATGGTTGATGGTTTGAAACCAGGGCAAAGGAAAATATTGTTTTGCTCTTTCAAGAGAAATTTTGTTACGCAAGCAAAGGTTGCTCAATTCTCGGGTTATGTCTCAGAGCATTCTGCTTACCATCACGGTGAGCAGAGTCTTGCTAGCACAATTAT
TGGAATGGCACAAGATTTTGTTGGAAGTAACAATATTAACCTTCTTGCCCCACTTGGACAATTTGGTACCAGATCCCAGGGTGGCAAAGATCATGCAAGCGCTCGATATGTTTTCACATGCCTGTCACCAATAACACGGTTCTTGTTCCCAAAAGATGATGATATACTCTTGGATTACTTGAACGAAGATGGCCAGAAAA
TTGAACCAACATGGTATGTGCCAATTATTCCAATGGTCCTTGTGAATGGAAGTGAAGGAATTGGAACTGGCTGGAGTTCCTTTGTACCTAATTACAACCCAAGGGATATTGCTGCAAATATTAAGTGCATGCTTAATGGTGAACCCTTGCAGCCAATGGCACCTTGGTACAAGGGTTTTAAGGGTACAATTGAACAAACA
GCTACAAAGGATAACTGTGTAACTTACACA
>TRINITY_DN104986_c1_g1_i2 from sample A2 / Example unspliced isoform:CAGGAATCATTTATGGATATTTGTCAATTCTTTGATTAACAATCCTGCTTTTGACTCCCAAACAAAGGAGACACTGACAACTCGTCAGAACAGCTTTGGTTCAAAGTGTGAACTCTCTCAAGAGTTTTTGAAGAAAGTGTCTAAGTGTGGAGTGGTTGAGAGCATATTATCATGGGCAGATTTCAAACAAAGCAAGGATC
TTAAGAAAACTGATGGAACAAAGAGACAGAGGTTAACTGGTATCACCAAGCTTGATGATGCAAATGATGCAGGGGGCAAGAATTCTGAGAAATGTACTTTAATTTTAACAGAGGGAGATTCGGCCAAGGCCCTTGCTATGGCAGGGTTGGCTGTTGTTGGTCGAAACCACTATGGTGTATTTCCTCTCAGGGGTAAGTTG
CTGAATGTAAGGGAAGCCAGCCATAAACAGATCATGGAGAATGCTGAGATTCAACATATCAAACAAATCCTTGGTCTGCAACATGGCAAGGAATATGACAGTGTCAAGTCTCTGAGATATGGCCATCTGATGATTATGACAGATCAGGATCATGATGGTTCACACATTAAAGGATTGTTGATCAACTTCATACACTCTTT
CTGGCCATCTCTACTCAAGATTCCTTCATTTCTTGTTGAATTCATTACTCCTATTGTCAAGGCAACCCATAAGGATGGGCGGGCATTGTCTTTCTATACCATGCCTGAGTATGAATCATGGAGAGAATCTCTGGGTGGATCAGCATCAGGGTGGACCATAAAGTACTATAAAgtaatgctagattttttctctttgtata
ttttggagtcctagctctgatttttattaggatcagcgattttttgctttgctattcatttctggagttatgcagGGTCTCGGTACAAGTACTTCTAAAGAGGGGAAAGAATATTTTAAAAATTTGGATAAGCATAAAAAAGATTTCATGTGGATTAATGAGGATGATGGAGATGCAATTGAGTTGGCCTTCAGCAAGAA
GAAAATAGAGGCCAGAAAGAACTGGCTAAGACATTTTGAGCCGGGAACATATTTGGACCAGACTGAGAAGCTTATCAAGTACAGTGACTTTGTAAACAAGGAGCTGATCCTATTTTCCATGGCTGATTTGCAAAGATCCATCCCATCTATGGTTGATGGTTTGAAACCAGGGCAAAGGAAAATATTGTTTTGCTCTTTCA
AGAGAAATTTTGTTACGCAAGCAAAGGTTGCTCAATTCTCGGGTTATGTCTCAGAGCATTCTGCTTACCATCACGGTGAGCAGAGTCTTGCTAGCACAATTATTGGAATGGCACAAGATTTTGTTGGAAGTAACAATATTAACCTTCTTGCCCCACTTGGACAATTTGGTACCAGATCCCAGGGTGGCAAAGATCATGCA
AGCGCTCGATATGTTTTCACATGCCTGTCACCAATAACACGGTTCTTGTTCCCAAAAGATGATGATATACTCTTGGATTACTTGAACGAAGATGGCCAGAAAATTGAACCAACATGGTATGTGCCAATTATTCCAATGGTCCTTGTGAATGGAAGTGAAGGAATTGGAACTGGCTGGAGTTCCTTTGTACCTAATTACAA
CCCAAGGGATATTGCTGCAAATATTAAGTGCATGCTTAATGGTGAACCCTTGCAGCCAATGGCACCTTGGTACAAGGGTTTTAAGGGTACAATTGAACAAACAGCTACAAAGGATAACTGTGTAACTTACACA
Intron 2 GTAATGAAAT ... CTAATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.04 | 2339 | 1 | 447 |
| A2 | 15.02 | 1981 | 0 | 350 |
| A3 | 15.61 | 2087 | 0 | 386 |
| A4 | 18.08 | 1858 | 1 | 410 |
| A5 | 13.01 | 762 | 0 | 114 |
| A6 | 16.04 | 89 | 0 | 17 |
| A7 | 12.46 | 899 | 0 | 128 |
| A8 | 17.99 | 269 | 0 | 59 |
| A9 | 16.42 | 738 | 0 | 145 |
| A10 | 14.8 | 1042 | 0 | 181 |
>TRINITY_DN96321_c1_g1_i3 from sample A4 / Example spliced isoformGAGGAAACGAGTTGTGGATATAGCTGGATGCCTTGGGAAGACAGTTAAGGTTGAGTTGAATGGACAACGGTTGCCTGTCAAGACCTTTCAAGACTATATTGGCCTATACATGCAAGCAGCTTCCAAATCGAAACCAGAGCCTCTACCAAGAATCTATGAAAAAGTAAGTGACAGATGGGAGATTTGTGTGAGCTTAAGTG
AAGGACAGTTTCAGCAGGTCAGCTTCGTTAATGGAATTGCTACCATTAAAGGTGGTTCCCATGTTGATTTAGTAGCAAACCAGATAACAAACTATGTGATGAACATTGTAAATAAGAAGAACAAGACCGCTGCAGTGAAAGCACACACAATCAGGAATCATTTATGGATATTTGTCAATTCTTTGATTAACAATCCTGCT
TTTGACTCCCAAACAAAGGAGACACTGACAACTCGTCAGAACAGCTTTGGTTCAAAGTGTGAACTCTCTCAAGAGTTTTTGAAGAAAGTGTCTAAGTGTGGAGTGGTTGAGAGCATATTATCATGGGCAGATTTCAAACAAAGCAAGGATCTGAAGAAAACTGATGGAACAAAGAGACAGAGGTTAACTGGTATCACCAA
GCTTGATGATGCAAATGATGCAGGGGGCAAGAATTCTGAGAAATGTACTTTAATTTTAACAGAGGGAGATTCGGCCAAGGCCCTTGCTATGGCAGGGTTGGCTGTTGTTGGTCGAAACCACTATGGTGTATTTCCTCTCAGGGGTAAGTTGCTGAATGTAAGGGAAGCCAGCCATAAACAGATCATGGAGAATGCTGAGA
TTCAACATATCAAACAAATCCTTGGTCTGCAACATGGCAAGGAATATGACAGTGTCAAGTCTCTGAGATATGGCCATCTGATGATTATGACAGATCAGGATCATGATGGTTCACACATTAAAGGATTGTTGATCAACTTCATACACTCTTTCTGGCCATCTCTACTCAAGATTCCTTCATTTCTTGTTGAATTCATTACT
CCTATTGTCAAGGCAACCCATAAGGATGGGCGGGCATTGTCTTTCTATACCATGCCTGAGTATGAATCATGGAGAGAATCTCTGGGTGGATCAGCATCAGGGTGGACCATAAAGTACTATAAAGGTCTCGGTACAAGTACTTCTAAAGAGGGGAAAGAATATTTTAAAAATTTGGATAGGCATAAAAAAGATTTCATGTG
GATTAATGAGGATGATGGAGATGCAATTGAGTTGGCCTTCAGCAAGAAGAAAATAGAGGCCAGAAAGAACTGGCTAAGACATTTTGAGCCGGGAACATATTTGGACCAGACTGAGAAGCTTATCAAGTACAGTGACTTTGTAAACAAGGAGCTGATCCTATTTTCCATGGCTGATTTGCAAAGATCCATCCCATCTATGG
TTGATGGTTTGAAACCAGGGCAAAGGAAAATATTGTTTTGCTCTTTCAAGAGAAATTTTGTTACGCAAGCAAAGGTTGCTCAATTCTCGGGTTATGTCTCAGAGCATTCTGCTTACCATCACGGTGAGCAGAGTCTTGCTAGCACAATTATTGGAATGGCACAAGATTTTGTTGGAAGTAACAATATTAACCTTCTTGCC
CCACTTGGACAATTTGGTACCAGATCCCAG
>TRINITY_DN96321_c1_g1_i2 from sample A4 / Example unspliced isoform:CTAAGACATTTTGAGgtaatgaaattagtatgcagcaagtaaaatattgttgaatggaagactgccaatattgtcacgacgctaacattgatgaaactaatggcagCCGGGAACATATTTGGACCAGACTGAGAAGCTTATCAAGTACAGTGACTTTGTAAACAAGGAGCTGATCCTATTTTCCATGGCTGATTTGCAAA
GATCCATCCCATCTATGGTTGATGGTTTGAAACCAGGGCAAAGGAAAATATTGTTTTGCTCTTTCAAGAGAAATTTTGTTACGCAAGCAAAGGTTGCTCAATTCTCGGGTTATGTCTCAGAGCATTCTGCTTACCATCACGGTGAGCAGAGTCTTGCTAGCACAATTATTGGAATGGCACAAGATTTTGTTGGAAGTAAC
AATATTAACCTTCTTGCCCCACTTGGACAATTTGGTACCAGATCCCAG