NA ----> NA
Intron 1 GTTAGTCTGT ... ATTTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.88 | 14 | 8 | 7 |
| A2 | 22.03 | 23 | 8 | 5 |
| A3 | 23.08 | 25 | 7 | 8 |
| A4 | 20 | 6 | 1 | 2 |
| A5 | 0 | 7 | 0 | 0 |
| A6 | 24.24 | 25 | 10 | 6 |
| A7 | 21.1 | 86 | 21 | 25 |
| A8 | 17.95 | 64 | 13 | 15 |
| A9 | 24.09 | 52 | 13 | 20 |
| A10 | 26.88 | 34 | 14 | 11 |
>TRINITY_DN40308_c0_g1_i2 from sample A7 / Example spliced isoformAGATGCAACTGCTAATTCTAATAATATTAGAGTCGAGTTCCTGAAGCTGTTCCAATCTTGAAACTATGAAATTTAGGTGGCTACAATCTTACATAAGTTTATAAGCAGGTAGTGGATAAGATTGAAGAAAAAAATGCATAACGCACTCTTCCTGTATTCTTCTTCTTGCATAACATTACCACCATCTTCAAAATTTCCTC
CGGATTCTTTGAATACGCGCAAATGCAAAGTGCAGCCTCCTGTATGCAGTGCAACCTCCAAGGCTGCATCCGTGGGTGGCCCCGCGAGTGCCGAAACGTTGTCGGCCAGAGAAAGAAGGAGACTCAGAAATGAACGGCGGGAAGAGGCCAAGAGTTCGAAGCCTTCATGGCGAGAAGAGGTGGAGAAGAAACTGTCGCAA
AGGAAGAAGAAGCCGAAGTCCTGGATGGAGGAGATGAACTTGGACAATTTGGCCGTCCATGGAGTCCAGTGGTGGATGCTGCTCGTGCCTCGAAATTCCGAGAGGCTTGCAGCAGATGATCTCTCCAAGGCATTTCCCTCTCAGTTTCCCGATTTCGAATTTCAGGTTGGCTTTTGCAGGTCTATTTACCAGAGATACCT
TCCAGAAGGAAATTGAAAAATGGATCTTACTCAGAAAGTAAGAAGAAAATGTTTCCTGGGTACCTGTTTATACGTTGTCCCCTAAACAAGGAGATATATGACTTTATAAGAAATACTCCACGGGTACGTGGGTTTTTTGGGCGGAAGGTCGGCAGTATGATAAGGCAGATGATCAAGCCTAAGCCTGTTTCTATTGCTGA
AATGGAAGAAACATTTAGAAAAGTTAAAGAAGAACAAGAGGCATATGAAATTGAAATTAAAGAAGAATTATTGAAGGAAGAGAGGAATAAAACAAATGATGATTCGATCGGACAGTATCTTTTGGAAGATTTGGAAGGGACAGATGTCCGCATGAAAAAAGATGCCAATTCTCACAGAGAGTCTGCCACTGATAAAGGTA
GCAAACAAGTTGCCTCTGTTGGTACTAAATCTAATTCCAAGAAACTCCCAGTGGTTGCTGCTGATTCTACAGATTATTCCAATGTGCCTTTTACAAAGGGGCTCAAGAAGCAGAGAAACAGTGGGAGAAAAGCCATACTTTCCAGAAAACAAGATTCTATACTAGTTGCAGGGTCTCCAATCAGGGTTATTTCAGGATCC
TTTGCTGGATTTACTGGCCATCTGAAAGAGATTGATGTGGACACTGGCAAGGCAAAAGTAATGCTTATGATGTTTGGACATGAATCACCAGTGAACATGGACATTGATCAAGTTGAATGTGAACCAAGCCAGGATAATGATGAGCCTTAATTGGTTTCTCTTAACAACCTTGATCTCAGTTTAAATGATAGGGCTTACAG
ATACTTACCTCCTTGGAAAGAGTAAGGTTGTAAGAATGCCAAATGAGTCATTTAGCATTGAATGTGCTATTAGAAGGTTATCTGTGAATTAGCAAGTTTCCTTCATTCATCAAGTTCCAAATGTAGCTTACAGATTATCTGTAATTATAAACAGCTATATCGTGAGTAATTAATGAGCTCCATGGGCAATCCCATGGAAT
AGTTTTACATGAAGGAACGACTCTTGAAGCAATTCAAGCTAAAATGTTTTCATAATTGGTGATCATATTTCCTTGCTTTGCACATTTCCATTTTGTCCTTATTACGGTCAGTGGACTTATTTAATAAATTCTTTTATTTATGTTCCAAAAAGCCTGCTTTTTCAATAGAACTAAGAAGATGC
>TRINITY_DN40308_c0_g1_i1 from sample A7 / Example unspliced isoform:AGATGCAACTGCTAATTCTAATAATATTAGAGTCGAGTTCCTGAAGCTGTTCCAATCTTGAAACTATGAAATTTAGGTGGCTACAATCTTACATAAGTTTATAAGCAGGTAGTGGATAAGATTGAAGAAAAAAATGCATAACGCACTCTTCCTGTATTCTTCTTCTTGCATAACATTACCACCATCTTCAAAATTTCCTC
CGGATTCTTTGAATACGCGCAAATGCAAATGCAAATGCAAAGTGCAGCCTCCTGTATGCAGTGCAACCTCCAAGGCTGCATCCGTGGGTGGCCCCGCGAGTGCCGAAACGTTGTCGGCCAGAGAAAGAAGGAGACTCAGAAATGAACGGCGGGAAGAGGCCAAGAGTTCGAAGCCTTCATGGCGAGAAGAGGTGGAGAAG
AAACTGTCGCAAAGGAAGAAGAAGCCGAAGTCCTGGATGGAGGAGATGAACTTGGACAATTTGGCCGTCCATGGAGTCCAGTGGTGGATGCTGCTCGTGCCTCGAAATTCCGAGAGGCTTGCAGCAGATGATCTCTCCAAGGCATTTCCCTCTCAGTTTCCCGATTTCGAATTTCAGGTCTATTTACCAGAGATACCTTC
CAGAAGGAAATTGAAAAATGGATCTTACTCAGAAAGTAAGAAGAAAATGTTTCCTGGGTACCTGTTTATACGTTGTCCCCTAAACAAGGAGATATATGACTTTATAAGAAATACTCCACGGGTACGTGGGTTTTTTGGGCGGAAGGTCGGCAGTATGATAAGGCAGATGATCAAGCCTAAGCCTGTTTCTATTGCTGAAA
TGGAAGAAACATTTAGAAAAGTTAAAGAAGAACAAGAGGCATATGAAATTGAAATTAAAGAAGAATTATTGAAGGAAGAGAGGAATAAAACAAATGATGATTCGATCGGACAGTATCTTTTGGAAGATTTGGAAGGGACAGATGTCCGCATGAAAAAAGATGCCAATTCTCACAGAGAGTCTGCCACTGATAAAGGTAGC
AAACAAGTTGCCTCTGTTGGTACTAAATCTAATTCCAAGAAACTCCCAGTGGTTGCTGCTGATTCTACAGATTATTCCAATGTGCCTTTTACAAAGGGGCTCAAGAAGCAGAGAAACAGTGGGAGAAAAGCCATACTTTCCAGAAAACAAGATTCTATACTAGTTGCAGGGTCTCCAATCAGGGTTATTTCAGGATCCTT
TGCTGGATTTACTGGCCATCTGAAAGAGATTGATGTGGACACTGGCAAGgttagtctgtttcatgttatcaggaacaatagaatatactaatatagtgactttctttggtgattttgactttgatgcctagattttggtctacctgttttgttctagtattgatcacactaagtaattgcacttctgtaagcaaacacaa
taacttaatgttgttgaatttcaatatgtctgggcgatttttcaaatgtaagtatggcaacttcattgttcttccaaggatgccaaagaagctgccaacattcatagtagattctcagtcaaaattttggttttttgaatttctgcagGCAAAAGTAATGCTTATGATGTTTGGACATGAATCACCAGTGAACATGGACA
TTGATCAAGTTGAATGTGAACCAAGCCAGGATAATGATGAGCCTTAATTGGTTTCTCTTAACAACCTTGATCTCAGTTTAAATGATAGGGCTTACAGATACTTACCTCCTTGGAAAGAGTAAGGTTGTAAGAATGCCAAATGAGTCATTTAGCATTGAATGTGCTATTAGAAGGTTATCTGTGAATTAGCAAGTTTCCTT
CATTCATCAAGTTCCAAATGTAGCTTACAGATTATCTGTAATTATAAACAGCTATATCGTGAGTAATTAATGAGCTCCATGGGCAATCCCATGGAATAGTTTTACATGAAGGAACGACTCTTGAAGCAATTCAAGCTAAAATGTTTTCATAATTGGTGATCATATTTCCTTGCTTTGCACATTTCCATTTTGTCCTTATT
ACGGTCAGTGGACTTATTTAATAAATTCTTTTATTTATGTTCCAAAAAGCCTGCTTTTTCAATAGAACTAAGAAGATGC