NA ----> NA
Intron 1 GTAAAAAGTG ... TGCATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.05 | 35 | 40 | 36 |
| A2 | 56 | 33 | 34 | 50 |
| A3 | 59.3 | 35 | 45 | 57 |
| A4 | 75.93 | 13 | 35 | 47 |
| A5 | 53.09 | 19 | 22 | 21 |
| A6 | 59.96 | 196 | 242 | 345 |
| A7 | 62.02 | 124 | 145 | 260 |
| A8 | 57.01 | 138 | 137 | 229 |
| A9 | 61.28 | 170 | 203 | 335 |
| A10 | 67.2 | 113 | 188 | 275 |
>TRINITY_DN109249_c0_g1_i3 from sample A2 / Example spliced isoformCAGATCTTTATATTTATCGACCGGGGCAGAGTCCGATAGATTTGTTTTGTTTTGTTACCTGCAACTTGCAAGGCGTTTGGTCCCAGGGGATGGAAGAAGATGACGAGTACGAAATTGTGAAGTTGGGAGGTCTCCAAATCCCCGGCAGACTTGTTTCGGATGCCTCGGAGGAAATTTTATTGCTTTGGGCAATAGGCCAA
CCGTGTACAGCGCCACAAAACAGATTTGTTAAACACACTTCCAACCATCTCAAGCTAGATGCCTGTGGTCACAACCTCTGCATACTCCAATCTCCATCCTCCATGAACCAAACAGGTGTAACGGGGGGCGTCATGTGGGACAGTGGGGTTGTGCTGGGAAAGTTCTTAGAGCATGCTGTTGACTCTAATCTATTGAATCT
TCAAGCCCTGCTGGGTGCCCAAGTCATTTTGACAGACTTGCCCGACCGCTTGAGATTGCTTGAGAAGAACGTTGAAGAGAATGTGAAGAAAGTGGGTGCACGTGGTACAGCACAGGTGAGGGAATTGACATGGGGAGAGGACTTGGATTCTGACCTGTTGGACCCTCTTCCGGATTATGTCCTTGGTTCAGATGTTGTCT
ATAATGAGGACGTTGTTCATGATTTGATTACTACTATACAGAGTCTATGTGGAAGCCATACTATTATTTTTATTTCTGGGGAGCTTCGCAATG
>TRINITY_DN109249_c0_g1_i2 from sample A2 / Example unspliced isoform:CAGATCTTTATATTTATCGACCGGGGCAGAGTCCGATAGATTTGTTTTGTTTTGTTACCTGCAACTTGCAAGGCGTTTGGTCCCAGGGGATGGAAGAAGATGACGAGTACGAAATTGTGAAGTTGGGAGGTCTCCAAATCCCCGGCAGACTTGTTTCGGATGCCTCGGAGGAAATTTTATTGCTTTGGGCAATAGGCCAA
CCGTGTACAGCGCCACAAAACAGATTTGTTAAACACACTTCCAACCATCTCAAGCTAGATGCCTGTGGTCACAACCTCTGCATACTCCAATCTCCATCCTCCATGAACCAAACAGGTGTAACGGGGGGCGTCATGTGGGACAGTGGGGTTGTGCTGGGAAAGTTCTTAGAGCATGCTGTTGACTCTAATCTATTGAATCT
TCAAGgtaaaaagtgtgtggaactgggttcgggctgtggactggctggttgcattgcagCCCTGCTGGGTGCCCAAGTCATTTTGACAGACTTGCCCGACCGCTTGAGATTGCTTGAGAAGAACGTTGAAGAGAATGTGAAGAAAGTGGGTGCACGTGGTACAGCACAGGTGAGGGAATTGACATGGGGAGAGGACTTGG
ATTCTGACCTGTTGGACCCTCTTCCGGATTATGTCCTTGGTTCAGATGTTGTCTATAATGAGGACGTTGTTCATGATTTGATTACTACTATACAGAGTCTATGTGGAAGCCATACTATTATTTTTATTTCTGGGGAGCTTCGCAATGATGTTGTACTTGAGTACTTTTTGGAATGTGCATTGAAAAGCTTCATTGTGGGG
TACATTGAGCAAAGAATTTGGCACCCAGAGTACAGAAGTCGCCGTGTTGCAATCTTTATGATGACTAAGAAGTTGTAAAATATGGTTTTAGAGGTTCATTATTGAGTTTTCAAAAACCAGTTGTCTACTTTGGTAGGCCTACGAGCATTAGAGCACATATTAATGGAAGTTGTTTAATGATGATTTCTAAAAGGTCCATC
ACACTTGGGTAGCTCAAAGGGTTCTTTTATAAGGAACGGTTGATACAGTGAGAATGTTATCTCTTGAATCATAAAATTGGGTTATCAATATTTTCTGTCAAAGTGTGAATTAGAGGCCTTCTATTATGCCATTTTTTTATAACCTTACACACATAGTAGAACCCATGTCAAACAAATAAAATGATTTGATATTTACATAT
GCAAACATTTATATATCTGAAGGAATTTAGTTTTCCTTAGATTGATCTTTGTGCCTTGTAGGCCTGCTGTTGGGATG