sp|Q6YZW2|RB208_ORYSJ ----> RNA-binding protein 208

Intron 1 GTTTGTAGAC ... CGCACTCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	66.67	4	8	2
A2	60	4	6	5
A3	50	1	1	0
A4	-1	0	0	0
A5	50	2	2	0
A6	73.08	7	19	10
A7	69.23	8	18	3
A8	59.18	20	29	6
A9	58.06	13	18	8
A10	100	0	4	0

>TRINITY_DN45567_c1_g1_i4 from sample A7 / Example spliced isoform

GCGGGAATATTTTGAATGGTGCAGTCACTCACCGAAGGCTCCTGAAAGTCTGATATAGGAATTCCACAGAGTAGTTCTCTATTTCGGTTATTTTCACAGCCTCGTCTGTTCCACTCTTCTACGCCATGGCAAATATTCTAAGCGAATTGGAGAGATTTGAGCAGGAAATGAAAGAATTGGTGTCAGATTCTCAATCTCCG
CCGTCGCCAAGTCCCACAGGCGATTCATTATCGAATTCGGCTTTGCCAGCTACTTCCTCAGAGCCAAGTGCACTTACTGGTATGCCATCCTCAACATCTGGGACTGGTGTGCAAAGCATAGCTCCAGTGCAACAGTCATCAAGGCCTCGAGCTCCTCCTTCATCAGTTAGCACAAGTAGTTTTCTCCCTGCGAGGCCTTC
ACCTGTCATAGCTTCAAGTGCCCATTTGCAGGCTCAGCCATCTACTGTTCCTGCTTCAGCAGGTATGTCTGGCCCAGCCGCATCTCAGTTACAATGGTTGACCAGTGGGGCAGGATCGGCACCAGCTCCATCAGCACCTGCGCCTCCAGTTTCAGCATCAAGCTCATCACAATTCACGTACTCTGGTGTTGCATATCCTC
CTGCATCAGGAACAGCTACATCCAGTGCTCCATACTTTCCTCTACCTTTCCATCTTCAGCGGCAACCTGACCATATCCAACAACAGCAACAACCAGAACAGCAGTACCTTCAGCAGCAGCAGTATTTGATGCCACAATATCAGCCTCAAGTTCAGAAGCAGTATCCATTAGTTTCACAACCTCAACAGCCAGTTGCTATT
CAAGCATCTCAGTACCAGTACTCATATCCGGCATCAGCATCTGTGGGTGGAATCTACTCACTTCCTCAGCAACAGCAGGCTCAGCAGTTATTCCAGAAGGATGCTCAAACCATCACACCTGAAGCTCTAGAGAATGTAAAGGCTGCTCTTGCAAGTAGTGAAAGTGAGCACAAGGCAGAATCTAAAAAGAAAGCAGTTCC
ACGAAAAGTTGCAGGACAATCATGGGAAGACCCAACACTTGCCGACTGGCCGGAAAATGATTTCCGCCTATTCTGTGGAGATCTCGGCAATGAAGTCAATGATGAGGTTCTTACCAAAGCGTTCTCAAGATATGCATCTTTCTTCATGGCTAGAGTTGTAAGAGACAAGCGGACTGGAAAAACAAGGGGATATGGATTTG
TGAGTTTCTCCAATCCTTCAGATCTTGCTCTTGCATTGAAGGAAATGAACGGAAAATATGTTGGGAATCGACCAATAAAGTTGCGCAAGAGTAACTGGAAGGAGCGGATAGATTATGAAGCGTGGGATAAACAGAAGATGCAGAGTCATAAGAAGGGGAAATTCTCAAAGAAGAATTTTTTGCACAAGTAAATCTCGAGA
TTAGCTTTTTCTAATTGACTGGTGCTATAACTTGGTGTGATATGCAGTGATACAAGGATGCATGTAGAGTCGAGCTAATTGTACAATATATCTTTAAGGATTACTTGCCCAATTGGGAATTGTGCCTCATGTCATTGGCACTTGTAATGAAGTATTTTTCATGATTGAGTTCTCAATTGATATTTAAAATTGGCAAGCAC
TTTCTTATATTATTGCAGGTTAAAACTTAAAAATGGCACATCTCTTTATGTTTAGCCTCCACAATATACAAAATATGCAGTCCAGCTATTAGTGTCTACTACAGTTTATGTATCCAGATTCGCAGAGTCCATGCATCTGGTTGCTTTGTGGATTGCTTGAAGGATGGAGTGGGAATATTGGGTGGGAACTGGAAGAAATT
TGCTCTCAGTTACTTTTCTGATGGGGTTTTCTCATAAAACCTTAGGTTATGGGGCAGCCTACAGTATCTACAACGATAAGTTTGGGACATCTTGTGACACCTAATTCCCACATTTGCTGGTCACAATTGATCAAGCAGACCCTCTAACAGGAAAGTTTGGTCAGTTTCGAGTTTGCGCTCCAAATATGAGCCCAAATGCA
CTATGTGAAAATTGGGACATAGCTACTTTTGTCTATATATCTACCAGGGTTGATTTGGACCGAA

>TRINITY_DN45567_c1_g1_i6 from sample A7 / Example unspliced isoform:

GCGGGAATATTTTGAATGGTGCAGTCACTCACCGAAGGCTCCTGAAAGTCTGATATAGGAATTCCACAGAGTAGTTCTCTATTTCGGTTATTTTCACAGCCTCGTCTGTTCCACTCTTCTACGCCATGGCAAATATTCTAAGCGAATTGGAGAGATTTGAGCAGGAAATGAAAGAATTGGTGTCAGATTCTCAATCTCCG
CCGTCGCCAAGTCCCACAGGCGATTCATTATCGAATTCGGCTTTGCCAGCTACTTCCTCAGAGCCAAGTGCACTTACTGGTATGCCATCCTCAACATCTGGGACTGGTGTGCAAAGCATAGCTCCAGTGCAACAGTCATCAAGGCCTCGAGCTCCTCCTTCATCAGTTAGCACAAGTAGTTTTCTCCCTGCGAGGCCTTC
ACCTGTCATAGCTTCAAGTGCCCATTTGCAGGCTCAGCCATCTACTGTTCCTGCTTCAGCAGGTATGTCTGGCCCAGCCGCATCTCAGTTACAATGGTTGACCAGTGGGGCAGGATCGGCACCAGCTCCATCAGCACCTGCGCCTCCAGTTTCAGCATCAAGCTCATCACAATTCACGTACTCTGGTGTTGCATATCCTC
CTGCATCAGGAACAGCTACATCCAGTGCTCCATACTTTCCTCTACCTTTCCATCTTCAGCGGCAACCTGACCATATCCAACAACAGCAACAACCAGAACAGCAGTACCTTCAGCAGCAGCAGTATTTGATGCCACAATATCAGCCTCAAGTTCAGAAGCAGTATCCATTAGTTTCACAACCTCAACAGCCAGTTGCTATT
CAAGCATCTCAGTACCAGTACTCATATCCGGCATCAGCATCTGTGGGTGGAATCTACTCACTTCCTCAGCAACAGCAGGCTCAGCAGTTATTCCAGAAGGATGCTCAAACCATCACACCTGAAGCTCTAGAGAATGTAAAGGCTGCTCTTGCAAGTAGTGAAAGTGAGCACAAGGCAGAATCTAAAAAGAAAGCAGTTCC
ACGAAAAGTTGCAGGACAATCATGGGAAGACCCAACACTTGCCGACTGGCCGGAAAATGATTTCCGCCTATTCTGTGGAGATCTCGGCAATGAAGTCAATGATGAGGTTCTTACCAAAGCGTTCTCAAGATATGCATCTTTCTTCATGGCTAGAGTTGTAAGAGACAAGCGGACTGGAAAAACAAGGGGATATGGATTTG
TGAGTTTCTCCAATCCTTCAGATCTTGCTCTTGCATTGAAGGAAATGAACGGAAAATATGTTGGGAATCGACCAATAAAGTTGCGCAAGAGTAACTGGAAGGAGCGGATAGATTATGAAGCGTGGGATAAACAGAAGATGCAGAGTCATAAGAAGGGGAAATTCTCAAAGAAGAATTTTTTGCACAAGTAAATCTCGAGA
TTAGCTTTTTCTAATTGACTGGTGCTATAACTTGGTGTGATATGCAGTGATACAAGGATGCATGTAGAGTCGAGCTAATTGTACAATATATCTTTAAGGATTACTTGCCCAATTGGGAATTGTGCCTCATGTCATTGGCACTTGTAATGAAGTATTTTTCATGATTGAGTTCTCAATTGATATTTAAAATTGGCAAGCAC
TTTCTTATATTATTGCAGGTTAAAACTTAAAAATGGCACATCTCTTTATGTTTAGCCTCCACAATATACAAAATATGCAGTCCAGCTATTAGgtttgtagacatagtttccatacattcataaaatcagggttttgttattcatgaaacttcattgaatactgggtgttttgtctaatttgcatcgcactccagTGTCTA

CTACAGTTTATGTATCCAGATTCGCAGAGTCCATGCATCTGGTTGCTTTGTGGATTGCTTGAAGGATGGAGTGGGAATATTGGGTGGGAACTGGAAGAAATTTGCTCTCAGTTACTTTTCTGATGGGGTTTTCTCATAAAACCTTAGGTTATGGGGCAGCCTACAGTATCTACAACGATAAGTTTGGGACATCTTGTGAC
ACCTAATTCCCACATTTGCTGGTCACAATTGATCAAGCAGACCCTCTAACAGGAAAGTTTGGTCAGTTTCGAGTTTGCGCTCCAAATATGAGCCCAAATGCACTATGTGAAAATTGGGACATAGCTACTTTTGTCTATATATCTACCAGGGTTGATTTGGACCGAA

Intron 2 GTCAAGTCGA ... TGTTCTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	22.69	92	27	0
A2	14.61	76	13	0
A3	24.6	95	31	0
A4	28.46	93	37	0
A5	14.08	61	10	0
A6	17.77	759	164	0
A7	20.34	748	191	0
A8	18.88	881	205	3
A9	17.68	815	175	0
A10	20.5	481	124	0

>TRINITY_DN33964_c0_g1_i3 from sample A6 / Example spliced isoform

AAAAATTATAATCTTGCGGGAATATTTTGAATGGTGCAGTCACTCACCGAAGGCTCCTGAAAGTCTGATATAGGAATTCCACAGAGTAGTTCTCTATTTCGGTTATTTTCACAGCCTCGTCTGTTCCACTCTTCTACGCCATGGCAAATATTCTAAGCGAATTGGAGAGATTTGAGCAGGAAATGAAAGAATTGGTGTCA
GATTCTCAATCTCCGCCGTCGCCAAGTCCCACAGGCGATTCATTATCGAATTCGGCTTTGCCAGCTACTTCCTCAGAGCCAAGTGCACTTACTGGTATGCCATCCTCAACATCTGGGACTGGTGTGCAAAGCATAGCTCCAGTGCAACAGTCATCAAGGCCTCGAGCTCCTCCTTCATCAGTTAGCACAAGTAGTTTTCT
CCCTGCGAGGCCTTCACCTGTCATAGCTTCAAGTGCCCATTTGCAGGCTCAGCCATCTACTGTTCCTGCTTCAGCAGGTATGTCTGGCCCAGCCGCATCTCAGTTACAATGGTTGACCAGTGGGGCAGGATCGGCACCAGCTCCATCAGCACCTGCGCCTCCAGTTTCAGCATCAAGCTCATCACAATTCACGTACTCTG
GTGTTGCATATCCTCCTGCATCAGGAACAGCTACATCCAGTGCTCCATACTTTCCTCTACCTTTCCATCTTCAGCGGCAACCTGACCATATCCAACAACAGCAACAACCAGAACAGCAGTACCTTCAGCAGCAGCAGTATTTGATGCCACAATATCAGCCTCAAGTTCAGAAGCAGTATCCATTAGTTTCACAACCTCAA
CAGCCAGTTGCTATTCAAGCATCTCAGTACCAGTACTCATATCCGGCATCAGCATCTGTGGGTGGAATCTACTCACTTCCTCAGCAACAGCAGGCTCAGCAGTTATTCCAGAAGGATGCTCAAACCATCACACCTGAAGCTCTAGAGAATGTAAAGGCTGCTCTTGCAAGTAGTGAAAGTGAGCACAAGGCAGAATCTAA
AAAGAAAGCAGTTCCACGAAAAGTTGCAGGACAATCATGGGAAGACCCAACACTTGCCGACTGGCCGGAAAATGATTTCCGCCTATTCTGTGGAGATCTCGGCAATGAAGTCAATGATGAGGTTCTTACCAAAGCGTTCTCAAGATATGCATCTTTCTTCATGGCTAGAGTTGTAAGAGACAAGCGGACTGGAAAAACAA
GGGGATATGGATTTGTGAGTTTCTCCAATCCTTCAGATCTTGCTCTTGCATTGAAGGAAATGAACGGAAAATATGTTGGGAATCGACCAATAAAGTTGCGCAAGAGTAACTGGAAGGAGCGGATAGATTATGAAGCGTGGGATAAACAGAAGATGCAGAGTCATAAGAAGGGGAAATTCTCAAAGAAGAATTTTTTGCAC
AAGTAAATCTCGAGATTAGCTTTTTCTAATTGACTGGTGCTATAACTTGGTGTGATATGCAGTGATACAAGGATGCATGTAGAGTCGAGCTAATTGTACAATATATCTTTAAGGATTACTTGCCCAATTGGGAATTGTGCCTCATGTCATTGGCACTTGTAATGAAGTATTTTTCATGATTGAGTTCTCAATTGATATTT
AAAATTGGCAAGCACTTTCTTATATTATTGCAGGTTAAAACTTAAAAATGGCACATCTCTTTATGTTTAGCCTCCACAATATACAAAATATGCAGTCCAGCTATTAGGTTTGTAGACATAGTTTCCATACATTCATAAAATCAGGGTTTTGTTATTCATGAAACTTCATTGAATACTGGGTGTTTTGTCTAATTTGCATC
GCACTCCAGTGTCTACTACAGTTTATGTATCCAGATTCGCAGAGTCCATGCATCTGGTTGCTTTGTGGATTGCTTGAAGGATGGAGTGGGAATATTGGGTGGGAACTGGAAGAAATTTGCTCTCAGTTACTTTTCTGATGGGGTTTTCTCATAAAACCTTAGGTTATGGGGCAGCCTACAGTATCTACAACGATAAGTTT
GGGACATCTTGTGACACCTAATTCCCACATTTGCTGGTCACAATTGATCAAGCAGACCCTCTAACAGGAAAGTTTGGTCAGTTTCGAGTTTGCGCTCCAAATATGAGCCCAAATGCACTATGTGAAAATTGGGACATAGCTACTTTTGTCTATATATCTACCAGGGTTGATTTGGACCG

>TRINITY_DN33964_c0_g1_i2 from sample A6 / Example unspliced isoform:

AAAAATTATAATCTTGCGGGAATATTTTGAATGGTGCAGTCACTCACCGAAGGCTCCTGAAAGTCTGATATAGGAATTCCACAGAGTAGTTCTCTATTTCGGTTATTTTCACAGCCTCGTCTGTTCCACTCTTCTACGCCATGGCAAATATTCTAAGCGAATTGGAGAGATTTGAGCAGGAAATGAAAGAATTGGTGTCA
GATTCTCAATCTCCGCCGTCGCCAAGTCCCACAGGCGATTCATTATCGAATTCGGCTTTGCCAGCTACTTCCTCAGAGCCAAGTGCACTTACTGGTATGCCATCCTCAACATCTGGGACTGGTGTGCAAAGCATAGCTCCAGTGCAACAGTCATCAAGGCCTCGAGCTCCTCCTTCATCAGTTAGCACAAGTAGTTTTCT
CCCTGCGAGGCCTTCACCTGTCATAGCTTCAAGTGCCCATTTGCAGGCTCAGCCATCTACTGTTCCTGCTTCAGCAGGTATGTCTGGCCCAGCCGCATCTCAGTTACAATGGTTGACCAGTGGGGCAGGATCGGCACCAGCTCCATCAGCACCTGCGCCTCCAGTTTCAGCATCAAGCTCATCACAATTCACGTACTCTG
GTGTTGCATATCCTCCTGCATCAGGAACAGCTACATCCAGTGCTCCATACTTTCCTCTACCTTTCCATCTTCAGCGGCAACCTGACCATATCCAACAACAGCAACAACCAGAACAGCAGTACCTTCAGCAGCAGCAGTATTTGATGCCACAATATCAGCCTCAAGTTCAGAAGCAGTATCCATTAGTTTCACAACCTCAA
CAGCCAGTTGCTATTCAAGCATCTCAGTACCAGTACTCATATCCGGCATCAGCATCTGTGGGTGGAATCTACTCACTTCCTCAGCAACAGCAGGCTCAGCAGTTATTCCAGAAGGATGCTCAAACCATCACACCTGAAGCTCTAGAGAATGTAAAGGCTGCTCTTGCAAGTAGTGAAAGTGAGCACAAGGCAGAATCTAA
AAAGAAAGCAGTTCCACGAAAAGTTGCAGGACAATCATGGGAAGACCCAACACTTGCCGACTGGCCGGAAAATGATTTCCGCCTATTCTGTGGAGATCTCGGCAATGAAGTCAATGATGAGGTTCTTACCAAAGCGTTCTCAAGATATGCATCTTTCTTCATGGCTAGAGTTGTAAGAGACAAGCGGACTGGAAAAACAA
GGGGATATGGATTTGTGAGTTTCTCCAATCCTTCAGATCTTGCTCTTGCATTGAAGGAAATGAACGGAAAATATGTTGGGAATCGACCAATAAAGTTGCGCAAGAGTAACTGGAAGGAGCGGATAGATTATGAAGCGTGGGATAAACAGAAGgtcaagtcgaaagccattcaaatttgacttatctttccatgcttccaa
tataattttttcatatgatgattatggtaccaggcacttatttgacataaaaccccctttttgttctacagATGCAGAGTCATAAG