sp|Q9C9V6|Y1790_ARATH ----> BTB/POZ domain-containing protein At1g67900

Intron 1 GTAATTTTTC ... TCTTTTCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	32	17	14	2
A2	27.27	20	11	4
A3	27.66	17	13	0
A4	42.86	12	14	4
A5	56.52	5	11	2
A6	28.28	52	24	17
A7	25.66	42	9	20
A8	20.55	29	8	7
A9	24.49	37	18	6
A10	26.03	27	12	7

>TRINITY_DN129819_c1_g1_i4 from sample A1 / Example spliced isoform

TGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTCGCGCTGTGAAGATGGTGAAATTATTGCAGT
GATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAAATTTA
TAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTTATAGCTATTAAAAAGCAGATGTTCTAGTGCCGTATTTATCTGAACAACAG

>TRINITY_DN129819_c1_g1_i1 from sample A1 / Example unspliced isoform:

TGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTCGCGCTGTGAAGATGGTGAAATTATTGCAGT
GATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGgtaatttttctgtttcttcttggaaatatttttgacgaaaatcgatcccgttatgaggctcagagg
aattaaagatttttatgcaatttgagaaaattaaagatttataaataattcgagggaattaaagattacaagcaatttgagggaatttaagatttacaagttcgtttagttttttggaattttttttgttcaggcccgttcattaagctttcctctattgcttttagcttcctgtatgacatgcaacattaagttaacag
ctgcgtcttcggaaaaattataaagacgattcagtgcttcttttccagGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAAATTTATAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTT
ATAGCTATTAAAAAGCAGATGTTCTAGTGCCGTATTTATCTGAACAACAG

Intron 2 GCCTGCCGGG ... TTGCTGCTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	94.45	0.7	8	0
A2	38.51	4.7	2	3
A3	61.08	6	9	0
A4	70.56	1.2	2	3
A5	70	1.3	3	1
A6	80.88	9.2	38	9
A7	57.48	9.8	13	4
A8	67.06	5.2	10	4
A9	69.08	9	20	4
A10	62.34	3.3	5	2

>TRINITY_DN43241_c1_g1_i6 from sample A7 / Example spliced isoform

CTTTATGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTTGCGCTGTGAAGATGGTGAAATTATT
GCAGTGATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAA
ATTTATAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTTATAGCTATTAAAAAGCAGATGTTCTAGTGCCGTATTTATCTGAACAACAGCCTTTTCAGCAGTTGCGAAAAAGCTCCACAACTTTCAGGATTTTTATTTCTTTTCAAGT
TTTATATCAAAATGTTGTCTGTTGCTTCGGAAGTATCAACTGATATAGTAATTGAAGTAAAGCATATAAAGTTTTTGTTGCACAAGGTATATCTTTCTAGCCATTAATCTAAAGTATAATGTTTTTGTATGCTTGGACTTCATTTCTCCATTCAGTTTTAGTAATGGAGTTTTAGTCCATTTCATGATTGCGTATAACAC
AGATGCCAATACTTATGTGTGGAAAGAGGTTGCTGTGGTGGGATTATTTTCATTCCTTTTGATAATGGTGCACTTTAGTCCAAGCATGTCATTGTTGATATGTAATAGATATAGTATGTACAATGAGCATCTATTGCAATGATTTCCTCAAGTTGAAGCATTACTATTTAGATAAAACGAGCATCAACAATATTTTATAG
TGATTTCCATACAATAAGGTGAAGCTTTTGACATGTGTAAATGATATTATTTCTTAGTATCAAAAAAAT

>TRINITY_DN43241_c1_g1_i3 from sample A7 / Example unspliced isoform:

CTTTATGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTTGCGCTGTGAAGATGGTGAAATTATT
GCAGTGATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGCTTCCTGTATGACATGCAACATTAAGTTAACAGCTGCGTCTTCGGAAAAATTATAAAGACG
ATTCAGTGCTTCTTTTCCAGGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAAATTTATAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTTATAGCTATTAAAAAGCAGATGTTCTAGT
GCCGTATTTATCTGAACAACAGCCTTTTCAGCAGTTGCGAAAAAGCTCCACAACTTTCAGGATTTTTATTTCTTTTCAAGTTTTATATCAAAATGTTgcctgccggggctctggacattcttaggccgctaggtgtgatgtaatgcctgtttcttgaaaaattatcgtcatttcagtcgcaatacatagcgctaccaaat
ctcgtctcgtgtttcacttattgctgctagGTCTGTTGCTTCGGAAGTATCAACTGATATAGTAATTGAAGTAAAGCATATAAAGTTTTTGTTGCACAAGGTATATCTTTCTAGCCATTAATCTAAAGTATAATGTTTTTGTATGCTTGGACTTCATTTCTCCATTCAGTTTTAGTAATGGAGTTTTAGTCCATTTCATG
ATTGCGTATAACACAGATGCCAATACTTATGTGTGGAAAGAGGTTGCTGTGGTGGGATTATTTTCATTCCTTTTGATAATGGTGCACTTTAGTCCAAGCATGTCATTGTTGATATGTAATAGATATAGTATGTACAATGAGCATCTATTGCAATGATTTCCTCAAGTTGAAGCATTACTATTTAGATAAAACGAGCATCA
ACAATATTTTATAGTGATTTCCATACAATAAGGTGAAGCTTTTGACATGTGTAAATGATATTATTTCTTAGTATCAAAAAAAT

Intron 3 GTATATCTTT ... TATAACACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	1	1
A2	96.49	0.3	8.7	5
A3	33.33	0	0.7	0
A4	100	0	4.7	1
A5	60.12	2	3.3	3
A6	83.46	3	13.7	17
A7	84.85	1	8.7	4
A8	77.51	2	8	7
A9	75.4	2	8.3	5
A10	79.17	1	5.7	3

>TRINITY_DN43241_c1_g1_i1 from sample A7 / Example spliced isoform

CTTTATGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTTGCGCTGTGAAGATGGTGAAATTATT
GCAGTGATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAA
ATTTATAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTTATAGCTATTAAAAAGCAGATGTTCTAGTGCCGTATTTATCTGAACAACAGCCTTTTCAGCAGTTGCGAAAAAGCTCCACAACTTTCAGGATTTTTATTTCTTTTCAAGT
TTTATATCAAAATGTTGTCTGTTGCTTCGGAAGTATCAACTGATATAGTAATTGAAGTAAAGCATATAAAGTTTTTGTTGCACAAGATGCCAATACTTATGTGTGGAAAGAGGTTGCTGTGGTGGGATTATTTTCATTCCTTTTGATAATGGTGCACTTTAGTCCAAGCATGTCATTGTTGATATGTAATAGATATAGTA
TGTACAATGAGCATCTATTGCAATGATTTCCTCAAGTTGAAGCATTACTATTTAGATAAAACGAGCATCAACAATATTTTATAGTGATTTCCATACAATAAGGTGAAGCTTTTGACATGTGTAAATGATATTATTTCTTAGTATCAAAAAAAT

>TRINITY_DN43241_c1_g1_i3 from sample A7 / Example unspliced isoform:

CTTTATGCCGCCCGGCGGTTTTCCCAGTGGCGGTTTCCGAGCGCGGTTTCACAGATAGATAAGCAATTTTCACGGATATTTATTCAAAAGCATCGAGACTCCACGGGATTTTCGACATATAGCAGCTTGTTCGCAGAGCCGAGTGACTTGCTTTTACTGAGAATACTTCAATTTTGCGCTGTGAAGATGGTGAAATTATT
GCAGTGATTTTTGCGGAGTTATTTAGCGAAATTTTGGCTGCTGGAGTTGATGAGGAGGAAATATTTGCGCTGTAGCAAGCATGAAGTTCATGAGACTTGGATCAAAGCGGGACACTTTTTATACGGTGGAGACTATCCGCTTCCTGTATGACATGCAACATTAAGTTAACAGCTGCGTCTTCGGAAAAATTATAAAGACG
ATTCAGTGCTTCTTTTCCAGGAAAATCGACAAAGGATGTTCCTACGGTGCAGTATTTGTGTTAATGGCAGCATTTTCGGAAATTTATAAAAAAAAAATTAAAAAAAGCTTACTGTATATGTTAATGCCAGCTTCTTCGGAAAATAGCGGCAGAAAACTCAGTGCGTGTTTTTATAGCTATTAAAAAGCAGATGTTCTAGT
GCCGTATTTATCTGAACAACAGCCTTTTCAGCAGTTGCGAAAAAGCTCCACAACTTTCAGGATTTTTATTTCTTTTCAAGTTTTATATCAAAATGTTGCCTGCCGGGGCTCTGGACATTCTTAGGCCGCTAGGTGTGATGTAATGCCTGTTTCTTGAAAAATTATCGTCATTTCAGTCGCAATACATAGCGCTACCAAAT
CTCGTCTCGTGTTTCACTTATTGCTGCTAGGTCTGTTGCTTCGGAAGTATCAACTGATATAGTAATTGAAGTAAAGCATATAAAGTTTTTGTTGCACAAGgtatatctttctagccattaatctaaagtataatgtttttgtatgcttggacttcatttctccattcagttttagtaatggagttttagtccatttcatg
attgcgtataacacagATGCCAATACTTATGTGTGGAAAGAGGTTGCTGTGGTGGGATTATTTTCATTCCTTTTGATAATGGTGCACTTTAGTCCAAGCATGTCATTGTTGATATGTAATAGATATAGTATGTACAATGAGCATCTATTGCAATGATTTCCTCAAGTTGAAGCATTACTATTTAGATAAAACGAGCATCA
ACAATATTTTATAGTGATTTCCATACAATAAGGTGAAGCTTTTGACATGTGTAAATGATATTATTTCTTAGTATCAAAAAAAT