NA ----> NA
Intron 1 GTAGTGTCTT ... TTGATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.67 | 10 | 3 | 1 |
| A2 | 55.56 | 4 | 4 | 6 |
| A3 | 30.77 | 9 | 5 | 3 |
| A4 | 32.08 | 18 | 8 | 9 |
| A5 | 20 | 2 | 1 | 0 |
| A6 | 19.44 | 29 | 8 | 6 |
| A7 | 13.92 | 34 | 6 | 5 |
| A8 | 13.89 | 31 | 5 | 5 |
| A9 | 20.27 | 59 | 17 | 13 |
| A10 | 20.35 | 45 | 14 | 9 |
>TRINITY_DN82282_c0_g1_i2 from sample A2 / Example spliced isoformCTTACACGAAGCGATAATGTCCTGTGTTAAACGAATCACTTACACGAAGCAATATTATTCCCTGTATTTATGAAGAAGGATAGTGGAATGGAAAGAGTAACCACAAGTTTTCATGTGTGTTACCCTTTTTCAATTGAAAAGGATTGACATTCAGATAATCCGTTTCTCTTTGGACACAGCAGAACAGAAGAGAAGATGGC
TTTATCCACTCACATTTTACATCTCCCTCAAGTGGCCAATGCTCGACTTGCAGCAGCACCCACCTCCAGGATTGCTTGCTCTTCTTTTGCGGGCTTTAAGGGAAGCATACCTCATGTTCAAAGGGGTTCGTTGTCTTCAAGCCTGTCCCTGTCTTTTGTATCTAGAAATTTGAAGATACGTCTTCCTTATGCAACGAATA
CACCGACGAAAGAACCATCTAGTGAATTGCAAGAAACTGAGAATATTGACATGGAGAATACACCAATAAAACTGTTGGAAGTCTGTCCTGAACCGGTCAGAAAGTTTCCATGGAAGAAAGCCGCTTGCAGAGTGATACAGCAGTTATTTCAACCTATCCTGGGTGTAGCGAAGCAGCTCTTAATTCCCATTTTAGCTGCC
ACATTTTTGATGGAGGCATCCTACTGCATTGCTCAAAATAAGGAACTGTTTATACCTATTGGCATATTAGCTGGTTGTGTTTTTGCAGAAATATTAAAGGAAACTGCTGTCGAACTCTATCAGAATTTTAAGGAAGGAGGTTTTCCTTGGCACCTCTTGGCCATGGCGTTGTTTTTTTCGTTGATCAAAGTTTCAGGGCC
TTATTATCCATATTGGGGACGCATCTTTCTACCCCATTTTGCAAATGGTGGCTTGTGGCAAACGATTTGGCTCACAAGGAATTGGCACAAGAACCAATCTCAGACCACTGAAGTAGGAAGTAATGGAGAGAATACAAGATCAGAGTCCAATTTAAAAACAAGATATTCATGATGGGCAGAGTTTGCCATGTCAATTGGTA
TCCATCTTGACATAGTACAGACTTTGGTATGATAATGACATCCCATCATGCCAAAGACCTTTAAGCTCTTGCGAGCTAGCAAGAGTAGAAGCTGTGACGAGTGAACACTTGCTGCTTTTTCCTCGCAAAACACAGTAACACTCTTCACATAACACAGTAACACAAAGTAGTGATATGCAAGGAACTGCTCTTTGTAGCTT
CCAAAAACAAACAGCAGACGACTTTAGAATTAGATATGACTTACCATACCTCTGATGCGCTGCACTCGAGCATGTATAACAAAAGGTTCTTTTCTCAATTAGATAACTGGTGGTTATTGTAGGCCAAAATTCTAATTTCCTGAACATTTGGCTCTAGAAAAAGACGAGAGATTTTACTCTTGCTATGCCTTTTTCTTATC
TTGGTAAAAAATGAGTTGCACCAAACATTGAAGAAGTTATAATACCAGTTATACCTGTC
>TRINITY_DN82282_c0_g1_i1 from sample A2 / Example unspliced isoform:CTTACACGAAGCGATAATGTCCTGTGTTAAACGAATCACTTACACGAAGCAATATTATTCCCTGTATTTATGAAGAAGGATAGTGGAATGGAAAGAGTAACCACAAGTTTTCATGTGTGTTACCCTTTTTCAATTGAAAAGGATTGACATTCAGATAATCCGTTTCTCTTTGGACACAGCAGAACAGAAGAGAAGATGGC
TTTATCCACTCACATTTTACATCTCCCTCAAGTGGCCAATGCTCGACTTGCAGCAGCACCCACCTCCAGGATTGCTTGCTCTTCTTTTGCGGGCTTTAAGGGAAGCATACCTCATGTTCAAAGGGGTTCGTTGTCTTCAAGCCTGTCCCTGTCTTTTGTATCTAGAAATTTGAAGATACGTCTTCCTTATGCAACGAATA
CACCGACGAAAGAACCATCTAGTGAATTGCAAGAAACTGAGAATATTGACATGGAGAATACACCAATAAAACTGTTGGAAGTCTGTCCTGAACCGGTCAGAAAGTTTCCATGGAAGAAAGCCGCTTGCAGAGTGATACAGCAGTTATTTCAACCTATCCTGGGTGTAGCGAAGCAGCTCTTAATTCCCATTTTAGCTGCC
ACATTTTTGATGGAGGCATCCTACTGCATTGCTCAAAATAAGGAACTGTTTATACCTATTGGCATATTAGCTGGTTGTGTTTTTGCAGAAATATTAAAGGAAACTGCTGTCGAACTCTATCAGAATTTTAAGgtagtgtctttttggattaatgttgtgcttttcggatgtcattatttcttgcttgtagtaagagctac
ttttatctttgtccacatttaatttattcagggaaattttgatggcagGAAGGAGGTTTTCCTTGGCACCTCTTGGCCATGGCGTTGTTTTTTTCGTTGATCAAAGTTTCAGGGCCTTATTATCCATATTGGGGACGCATCTTTCTACCCCATTTTGCAAATGGTGGCTTGTGGCAAACGATTTGGCTCACAAGGAATTG
GCACAAGAACCAATCTCAGACCACTGAAGTAGGAAGTAATGGAGAGAATACAAGATCAGAGTCCAATTTAAAAACAAGATATTCATGATGGGCAGAGTTTGCCATGTCAATTGGTATCCATCTTGACATAGTACAGACTTTGGTATGATAATGACATCCCATCATGCCAAAGACCTTTAAGCTCTTGCGAGCTAGCAAGA
GTAGAAGCTGTGACGAGTGAACACTTGCTGCTTTTTCCTCGCAAAACACAGTAACACTCTTCACATAACACAGTAACACAAAGTAGTGATATGCAAGGAACTGCTCTTTGTAGCTTCCAAAAACAAACAGCAGACGACTTTAGAATTAGATATGACTTACCATACCTCTGATGCGCTGCACTCGAGCATGTATAACAAAA
GGTTCTTTTCTCAATTAGATAACTGGTGGTTATTGTAGGCCAAAATTCTAATTTCCTGAACATTTGGCTCTAGAAAAAGACGAGAGATTTTACTCTTGCTATGCCTTTTTCTTATCTTGGTAAAAAATGAGTTGCACCAAACATTGAAGAAGTTATAATACCAGTTATACCTGTC