sp|F4I171|MD15A_ARATH ----> Mediator of RNA polymerase II transcription subunit 15a
Intron 1 GTAAGCTTAT ... TGTTTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.81 | 21 | 7 | 10 |
| A2 | 14.29 | 12 | 2 | 2 |
| A3 | 15.15 | 14 | 3 | 2 |
| A4 | 25.93 | 10 | 2 | 5 |
| A5 | 22.22 | 7 | 3 | 1 |
| A6 | 25 | 18 | 6 | 6 |
| A7 | 23.44 | 49 | 15 | 15 |
| A8 | 22.35 | 33 | 9 | 10 |
| A9 | 25 | 39 | 16 | 10 |
| A10 | 17.5 | 33 | 8 | 6 |
>TRINITY_DN39720_c1_g1_i6 from sample A9 / Example spliced isoformGCGGCGGAGATTATTTAGAGTTCTTGATAAATTGTAATGATCGGAAATTCATAAGCAGTTGAATGGACACTCTTCTGAGACACATGCCACGGACAGGTCTAGATGGCACAAATGAACTTAGAAAGATTGCTGTGCGGTTTGAGGATAAGATTTTTAAAGTTACTGAAAATCAGCAAGAGTATCTACGAAAAATATCTTTC
AAGATGCGAGCATTAGAGCCAAGAGCCAATGCACGTTTCGGCAATCATATTCCAGGGAATTCATTTGGTAACAACCAGCGGCCTCTAAATCCTGCATGCTTGTTTGGCTTCTGCCATATCTTCAGTTCTCACACGTGTATGCCCCCTGGAATTTCTCCTGGGATTTCGTTCATTCTTCCAGCTACAGGAGGTGAGGGTAG
AGAGGGGGTTTATGAGGGTCAGTGGCAGCTGGATCAACCCTTGGATGATCAGCCACAGGGTGAGATTGAGATGGTAGTAGAAGGTGGGCCGCCTCCTCAAGGCTCAGGGCAATCCAGTTGAGACTCTCTAGACTCTGGAGGCCACTGAGGCTCCTTTTTTCCCTTATCTACTATGGGATGCTCCTGATCTGTTGTTTCCA
GATGCTATAGCAAAGCTTGGGGTTCCAGATGCTGCTT
>TRINITY_DN39720_c1_g1_i12 from sample A9 / Example unspliced isoform:GTCGATAAGATGTACTCATTCTACACACAGCATCCATCTTTTTTTTTGTTTTTTAATTTGGGGGTTTGTGTTTTGGTTTATGTGTCATGGTAGATATTCAGACGTAGAGTTGGGTATATTGATTTACGATCAGTAAGACGACCTTGAACCAATCAATCCATAGGACAAGGTTGCATAATTTCAAATCATCTTTGGAAGTG
AATAGGGCTTAGTCTCGCGTTAGGTTTAAAAAACAATCAATACATCCACTGCAACATGTTTGTTGTTGTTGTCTATGCATTTATTCATTATTGTAAATTATTATTTCTGGAAGTGGCATCCATTTAATTGAGTGGGGTTTTTGGGACTGCTTTTCGGGGAAATTACTTGCAATTTTTCATCTTACAGATCCAGTGAATTC
ACTCCTTTATATGTTCATCTTACAGATCCAATGAATCTATACTCTTATATAATGGACACTCTTCTGAGACACATGCCACGGACAGGTCTAGATGGCACAAATGAACTTAGAAAGATTGCTGTGCGGTTTGAGGATAAGATTTTTAAAGTTACTGAAAATCAGCAAGAGTATCTACGAAAAATATCTTTCAAGATGCGAGC
ATTAGAGCCAAGAGCCAATGCACGTTTCGGCAATCATATTCCAGGGAATTCATTTGGTAACAACCAGCGGCCTCTAAATCCTGCATGCTTGTTTGGCTTCTGCCATATCTTCAGTTCTCACACGTGTATGCCCCCTGGAATTTCTCCTGGGATTTCGTTCATTCTTCCAGCTACAGGAGGTGAGGGTAGAGAGGGGGTTT
ATGAGGGTCAGTGGCAGCTGGATCAACCCTTGGATGATCAGCCACAGGGTGAGATTGAGATGGTAGTAGAAGGTGGGCCGCCTCCTCAAGGCTCAGGgtaagcttatttaagttattttttggttcaagcatctcagtttctcttatcagtgctcatcccctatttctcagttttttaccacacttccgtacttgttttg
tagGCAATCCAGTTGAGACTCTCTAGACTCTGGAGGCCACTGAGGCTCCTTTTTTCCCTTATCTACTATGGGATGCTCCTGATCTGTTGTTTCCAGATGCTATAGCAAAGCTTGGGGTTCCAGATGTTGCTTTAGCTCCTGCGCTTCAGATTCTGGAGACACTGAGACACCATGAAAGGCGAATAGCTGAGTTAGAGGGG
GAGTTGAGAGGGCTAAGGGCTAACGGAGTTGAGTGTGTAATAAAGTGACAGATAGGCATGCAAGGTGTCACTGACAATAAGAACTGAAGAGTTAAAGGGGATTTTAATGGCTAGAATAATTAATAAATGACTTTATGTTTGAATCTATCCCCTACAGGGATTGTGAATTTTTCTTCTGTTAACGAGCTGAGCACCTGAGC
ACCTGAGCAGTACACATTGGAGGCATGGATAGCTGATACAATTACCTATTATGCTCACATTCTAGATCATCATAGTGAGGTTCTTGTACAAGGAGGTAATTGTGATGTTCCTGCAAGTATTACTATATCCTCGACTGTATGAAAAGCAACAGAAAATCTGCTGTATAAGGATTTTACTGTAGCTTTTTAATTAGACAATG
CATATTTGTCACAAATTTAGGAGAAACGAAGAGGGTGCAGCATCAACATTGATGAATCTAGCCACTTTTGAACACTAAACAAGTAACAGAACTGGAGATGATGAGATGATTGTTCATATGTAGTAGACCGTAGACCTGACATTGTTGATGTGGACTATAGGCATAGCTATGTTTTAAGACTAACTATACACTAGCATAAA
ATCATGTTAACCACAGATTTATGATGTACGAAGAGGGCATATAAAAAACTCGGGGGAAAACCCTCCTTGCTTAAACGAAACATGGTTAGCTAGTCTTTTTTTCTTTTCTACTTTACTCTTTGGACATCATTTTTTCTTCATTTTATTATATTCCATGACACACAAATGTGAAACATCTCTTCCACCCCAGGGTGCAAGAG
CATCTTGCTTCTCTCTGTATATTCTCAAAATGATATATGGATTCTCAAAATGATAATATTGCAG