sp|Q9MAK9|PS10B_ARATH ----> 26S proteasome regulatory subunit S10B homolog B
Intron 1 GTGCTTTTTC ... GTAATACGAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.11 | 4 | 0 | 1 |
| A2 | 33.33 | 4 | 2 | 2 |
| A3 | 27.27 | 4 | 0 | 3 |
| A4 | 0 | 2 | 0 | 0 |
| A5 | 0 | 3 | 0 | 0 |
| A6 | 25 | 3 | 0 | 2 |
| A7 | 6.67 | 7 | 0 | 1 |
| A8 | 0 | 5 | 0 | 0 |
| A9 | 20 | 2 | 0 | 1 |
| A10 | 44.44 | 5 | 3 | 5 |
>TRINITY_DN36362_c0_g1_i1 from sample A10 / Example spliced isoformCAGAGATATATGATAAGATTGCAAAAGGCACTAGGTGCAAATTTGAATCTAATCGACCTCGAGCAGTGCTCTTTGAAGGACCTCCAGGTACAGGAAAAACATCTTGTGCTCGGGTCATTGCAAGCCAAGCAGGTGTTCCGCTGTTGTATGTTCCGCTCGAGGTGGTGATGTCAAAGTACTATGGTGAAAGTGAGCGGCTG
CTGGGATCTATATTTAATCTTGCTAACGAACTTCCTGATGGTGCTATTATATTTTTGGATGAGGTTGATTCTTTTGCTGCAACTCGTGACCAAGAGATGCATGAGGCTACTCGAAGGATCTTATCTGTGCTTTTGAGACAGATAGATGGATTTGAACAGGAGAAGAAGGTTGTGGTAATTGCTGCTACAAATAGAAGGCA
GGATCTTGACCCTGCTCTTGTCAGCCGATTTGATTCTTCAATCACATTTGACCTCCCTGATGAGCAAACACGACAAGAGATTGCAGCTCAGTATGCAAGGCATTTAAGTACTCTAGAACTAGCCACGTTTGCTTTAGTCACTGAAGGTATGTCAGGGCGTGACTTGAGGGACATTTGTCAACATGCTGAGCGTCGTTGGG
CCTCAAAGCTTATTAGAGGCCAAGTAGGCGAACCATCAACACATGGCCTTCCACCAATTCAAGAATACATGGAGTGTGCTCAGAAAAGGCAACAGACTGTACTTAGACAGCGTGATGAGGGTCAAAAAATCATGGGAGATGCTGGAAATACTGGCCCTCGAATGAAGAAATGGCCATCAGTGATGGTATAGACAGCATAA
TGAAGGATGCCTATACAGGCAATGGAGGCATGTACAGAAAGTGAAAAGAATTCTCCAGTGCAAGAGAAAATCCTGATACAGGATATTGTGCATTAAACTTGTATTATTTTATCGAAAGAATGCAATGGTTTAAAACTTTAATATGTGTGCACTAGACTATCCTTGAAAGAGTTATTAGGATATGTTATGTCCATTTTGAA
CATCAGCGCAGTGCTGCACACTCATCACAGTGCCAGATTTCTTGAAAAAGCAGTGAATGTCACGTTATTGTCTGCCCTGTATCAATAGGGCATTGTATTCATCGATCATTGGAGGGTGGATCAGCCAAATAATTGAAACATTGTAAGGTTTAATGAAATAATTC
>TRINITY_DN36362_c0_g1_i2 from sample A10 / Example unspliced isoform:CAGAGATATATGATAAGATTGCAAAAGGCACTAGGTGCAAATTTGAATCTAATCGACCTCGAGCAGTGCTCTTTGAAGGACCTCCAGgtgctttttcactagcaaatttctctgtaatacgagGTACAGGAAAAACATCTTGTGCTCGGGTCATTGCAAGCCAAGCAGGTGTTCCGCTGTTGTATGTTCCGCTCGAGGTG
GTGATGTCAAAGTACTATGGTGAAAGTGAGCGGCTGCTGGGATCTATATTTAATCTTGCTAACGAACTTCCTGATGGTGCTATTATATTTTTGGATGAGGTTGATTCTTTTGCTGCAACTCGTGACCAAGAGATGCATGAGGCTACTCGAAGGATCTTATCTGTGCTTTTGAGACAGATAGATGGATTTGAACAGGAGAA
GAAGGTTGTGGTAATTGCTGCTACAAATAGAAGGCAGGATCTTGACCCTGCTCTTGTCAGCCGATTTGATTCTTCAATCACATTTGACCTCCCTGATGAGCAAACACGACAAGAGATTGCAGCTCAGTATGCAAGGCATTTAAGTACTCTAGAACTAGCCACGTTTGCTTTAGTCACTGAAGGTATGTCAGGGCGTGACT
TGAGGGACATTTGTCAACATGCTGAGCGTCGTTGGGCCTCAAAGCTTATTAGAGGCCAAGTAGGCGAACCATCAACACATGGCCTTCCACCAATTCAAGAATACATGGAGTGTGCTCAGAAAAGGCAACAGACTGTACTTAGACAGCGTGATGAGGGTCAAAAAATCATGGGAGATGCTGGAAATACTGGCCCTCGAATG
AAGAAATGGCCATCAGTGATGGTATAGACAGCATAATGAAGGATGCCTATACAGGCAATGGAGGCATGTACAGAAAGTGAAAAGAATTCTCCAGTGCAAGAGAAAATCCTGATACAGGATATTGTGCATTAAACTTGTATTATTTTATCGAAAGAATGCAATGGTTTAAAACTTTAATATGTGTGCACTAGACTATCCTT
GAAAGAGTTATTAGGATATGTTATGTCCATTTTGAACATCAGCGCAGTGCTGCACACTCATCACAGTGCCAGATTTCTTGAAAAAGCAGTGAATGTCACGTTATTGTCTGCCCTGTATCAATAGGGCATTGTATTCATCGATCATTGGAGGGTGGATCAGCCAAATAATTGAAACATTGTAAGGTTTAATGAAATAATTC
Intron 2 GTTAGTCAAT ... TTTATTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25 | 12 | 5 | 3 |
| A2 | 31.03 | 10 | 2 | 7 |
| A3 | 20.93 | 17 | 4 | 5 |
| A4 | 100 | 0 | 0 | 2 |
| A5 | 27.27 | 4 | 3 | 0 |
| A6 | 15.79 | 8 | 2 | 1 |
| A7 | 0 | 4 | 0 | 0 |
| A8 | 20 | 2 | 0 | 1 |
| A9 | 11.11 | 4 | 0 | 1 |
| A10 | -1 | 0 | 0 | 0 |
>TRINITY_DN110671_c0_g2_i5 from sample A1 / Example spliced isoformTCTTGTTCCGACCATTTGTCGTCGCACGAAGTAGAGCCGCACTTTGATCGCTGGTTCCACCATCTATGCAGAATCCTTTTCCCAAATGCCAGAAGATCAAGAGGCTCAAAAAGCTCAGCATCAGATTGCTTACCTGGAATCTTTGGCTCTGTCGTGGCAATGGGAATTGGTGTAGGATTTGTTACTGCTAGAACTACATT
TGACATGGCTTTTGCTGAAGCCAACAATAATGAGTGCCATGGCACTATTAATGCAGATGCAAAATCCTTCTCTACAGAAAATGATGTGGACATGGAAAAAGTTGTTCGCCATGAGCGTGAGAGATTAGAGGAGCGGTTAAAGAAATTAGATACTCAAGGGGTCATCCTTCCTTCTTTCACTGTTGCTGCTAAAGGTCAAC
AGGTTGCAATAAGATTTCAAGTACCTCCTAGCTGTGACCTTTCTCATTTGGTTGTGGATGTGGTTTCACGCCTGGGATTGAAGACTGATGAGAGTGGAGGTGGCTCAGAAATGATTTTGCATGCATGGGACAGTGCAGTTGCTCGACAGTTAATACTGGTACACCCAGACCAGTTTATTCCCAAGGGTGTCGAGACAGAT
CAGAGAGTTGAAAGTCCAAAAGAACCATTGAGACACAGAACAACCAATGGAAATAACATTTGCGTTCTCGTATTTGAGCCACTTATTGGCTCCAACAATGCTGAAATTGAATTTCTGAAAAGGGGCCCTTTCACTGTAAAGGAACTTGATGCTCTTATCAGTGCATTAAGAATAGCTTCTGGAAACACAAATGGAAGGAG
ATCTGTACAGAAGAAACACAGAGATGCTCCAAAGCAAAGGGACAGGCAGAACACTGGACCTAATGTTTCTTCTGATGCAAAGGCTTTAGAAGCATTAGAGGGCATGGGAGTGAAGATATATGGTCTAGAGGCAACTTTTGGAAGCTCTGATAAGGATGTAGTATCTTGGGACAATATAGCAGGATACCATGAGCAAAAAA
GGGAAATAGAGGACACTGTCTTGTTGGCTCTACGACGACCAGAGATATATGATAAGATTGCAAAAGGCACTAGGTGCAAATTTGAATCTAATCGACCTCGAGCAGTGCTCTTTGAAGGACCTCCAGGTACAGGAAAAACATCTTGTGCTCGGGTCATTGCAAGCCAAGCAGGTGTTCCGCTGTTGTATGTTCCGCTCGAG
GTGGTGATGTCAAAGTACTATGGTGAAAGTGAGCGGCTGCTGGGATCTATATTTAATCTTGCTAACGAACTTCCTGATGGTGCTATTATATTTTTGGATGAGGTTGATTCTTTTGCTGCAACTCGTGACCAAGAGATGCATGAGGCTACTCGAAGGATCTTATCTGTGCTTTTGAGACAGATAGATGGATTTGAACAGGA
GAAGAAGGTTGTGGTAATTGCTGCTACAAATAGAAGGCAGGATCTTGACCCTGCTCTTGTCAGCCGATTTGATTCTTCAATCACATTTGACCTCCCTGATGAGCAAACACGACAAGAGATTGCAGCTCAGTATGCAAGGCATTTAAGTACTCTAGAACTAGCCACGTTTGCTTTAGTCACTGAAGGGTGAGAAGTAACAA
GTCCTTTAAAATTCTCTTTATGGTTAGTCAGCATCTTTGCTGTGGACAGCTTAGGATTTCGTTTTCTTTTCCCTCAAATATTTTCAGTGACTTCATTTGTTTGGTTTTGAATATGCTTCTATACATTCAACACCCTTTCAGTCTGAGAAGACAAGAATGCTAAGGTGCACAGTTAAAGTATATAATTGTGCTGAGGTTTT
TGTAGAGTAAATGGTTACTACTTCGTAGGTCATCACGTTTCAACTTTCTGCTACTATCTTATGACTTAAGATCAGTGATAAAGTTACGGCATGTGCATCTTGTGCAATTTTTTTTCTGCTCTCTGCCACAATACTAACTGCCTAGATCAGCG
>TRINITY_DN110671_c0_g2_i3 from sample A1 / Example unspliced isoform:TCTTGTTCCGACCATTTGTCGTCGCACGAAGTAGAGCCGCACTTTGATCGCTGGTTCCACCATCTATGCAGAATCCTTTTCCCAAATGCCAGAAGATCAAGAGGCTCAAAAAGCTCAGCATCAGATTGCTTACCTGGAATCTTTGGCTCTGTCGTGGCAATGGGAATTGGTGTAGGATTTGTTACTGCTAGAACTACATT
TGACATGGCTTTTGCTGAAGCCAACAATAATGAGTGCCATGGCACTATTAATGCAGATGCAAAATCCTTCTCTACAGAAAATGATGTGGACATGGAAAAAGTTGTTCGCCATGAGCGTGAGAGATTAGAGGAGCGGTTAAAGAAATTAGATACTCAAGGGGTCATCCTTCCTTCTTTCACTGTTGCTGCTAAAGGTCAAC
AGGTTGCAATAAGATTTCAAGTACCTCCTAGCTGTGACCTTTCTCATTTGGTTGTGGATGTGGTTTCACGCCTGGGATTGAAGACTGATGAGAGTGGAGGTGGCTCAGAAATGATTTTGCATGCATGGGACAGTGCAGTTGCTCGACAGTTAATACTGGTACACCCAGACCAGTTTATTCCCAAGGGTGTCGAGACAGAT
CAGAGAGTTGAAAGTCCAAAAGAACCATTGAGACACAGAACAACCAATGGAAATAACATTTGCGTTCTCGTATTTGAGCCACTTATTGGCTCCAACAATGCTgttagtcaatcattatcctgtcatctaaattataaaatgtctattggaaaatctagtggttccattagtattgcaatttcatatggaatataattata
ccttcaattcaagatctctatattgttgagagtcaacttattggagggtggtagagagaatgactaagaaaaaagggaaacctcaaaggtacactgctaactagactgtgtacatgttattttattttagGAAATTGAATTTCTGAAAAGGGGCCCTTTCACTGTAAAGGAACTTGATGCTCTTATCAGTGCATTAAGAA
TAGCTTCTGGAAACACAAATGGAAGGAGATCTGTACAGAAGAAACACAGAGATGCTCCAAAGCAAAGGGACAGGCAGAACACTGGACCTAATGTTTCTTCTGATGCAAAGGCTTTAGAAGCATTAGAGGGCATGGGAGTGAAGATATATGGTCTAGAGGCAACTTTTGGAAGCTCTGATAAGGATGTAGTATCTTGGGAC
AATATAGCAGGATACCATGAGCAAAAAAGGGAAATAGAGGACACTGTCTTGTTGGCTCTACGACGACCAGAGATATATGATAAGATTGCAAAAGGCACTAGGTGCAAATTTGAATCTAATCGACCTCGAGCAGTGCTCTTTGAAGGACCTCCAGGTACAGGAAAAACATCTTGTGCTCGGGTCATTGCAAGCCAAGCAGT
AGGTGCTCTTTAACTCGAGTTAATAGGAAGTGCTTGATTATTAAATTGAACTGCAGTTTGCTGTTGCTATGCTGGATGATAAATTCAACGTTTTTCATTATTGGTACACTACTTCTACATTACCAGCAATGTGACCAGAAGACCCTTTTCTCAGTGTGTTCCCATTCCTGTCTTGACACTACATTTGTACATTAC