NA ----> NA
Intron 1 GTAAGATTAT ... ATGGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.02 | 45 | 15.7 | 10.2 |
| A2 | 20.52 | 49 | 13.3 | 15.8 |
| A3 | 27.68 | 61 | 24.3 | 8.2 |
| A4 | 13.44 | 31.2 | 5 | 10 |
| A5 | 20.83 | 12 | 3.3 | 3.7 |
| A6 | 17.3 | 176 | 38.3 | 31 |
| A7 | 20.29 | 238.3 | 63.2 | 45.3 |
| A8 | 18.92 | 383.7 | 93 | 70 |
| A9 | 19.58 | 238.7 | 60.7 | 53.7 |
| A10 | 13 | 210 | 32.2 | 49.3 |
>TRINITY_DN118311_c0_g1_i2 from sample A1 / Example spliced isoformATGAAAGTAGGTGCAAAAGGAGTGCAGCTTTACATTTCTCCATGTATGCGTATATGCTAGAATTCCTTGTGCTGCCATGACCATATAGATAACGCCCGTCTTCCAACGTTTTCAAAGAATAGAATATGGCTCACCAAGTCCTTGGACGATCGATACAATCTACTTACCTCTTCATATCTCATGTCAATGCACTTTTTAGG
CCTCTTCCTCCTGTCATCTGCTTGTCACCGCCCTCGATTGTTTCCTCGAGGAAGCAGCGATGCTCATCATCAGCCTTCAGGTCTCTTCTGTCCACTTCACCATTCCAACGCCCTGTTGCACTGAGTCAACATAAAACCCAACCTGTTATTTCTCAAGAAGAGGAAGGAGATTATGAAGATGAAGAAGAATACGAAAGCGA
AAGAGGAGATTATGAAGAAGAAGAAGATAATGAAAAAAACAAGGTGGTGGTATCTTCCGGGGAACAGAAACAAGTAACTAATCCTGCCAGAAGGATTCCTGAATTGACAGTCAAAGAGAAGAAAGAGCTTAGTGCCTATGCTCACAGTCTTGGCAAGAAACTCAAATGTCATCAGGTCGGCAAGTCAGGTGTGACTTCTT
CTTTAGAAGTTTCTGTTAGTGATGCGCTTGAAGCAAATGAGCTTATAAAGTTGAAGGTGCACAATACTTGTCCAGATGAACTAGATGTTGTAGCTTCTAGATTGCAAGAAACAACAAGGTCAGTGGTAGTTGGGCAAATTGGCCGGACCTTTATACTTTATAGACCCAGTCTTCGTAAGGTTCAAACAAAAGAGGAAAAG
AAGCCACCACAAAGGTCGCAAAGAAGAAGTATCGCAAAATCTGCAGGATGGAAGAATAGGCCAACTTAAGATTGATTGGCAGAAGATGTTCGGCTCAAAGGATGAAATTAAGTTTAGTCAATCAAATCGGCTTCACATAATCATCAATTTTGCTGCAGAAAAATTGTTTTGCTGTATGGTTCAATTCTTCTTATATGAGA
CATTTATTCATGTCTTTCATTAAGCACAACTGAATTAATCATTTTCTTTTGGGGAAAGTAATCGAGGAGAGACATGCAGCCTCGTGAAAGTATTTGGAAAGTGAAACCCCTTACTATAGTTTTCAGAAGGAATTCTTGCTTGATGTGACAACCTCCTTCCAAGCTTTATTGTGGGTTCCAGATTACTTATGATTTAAGCA
GTCTGGTTCAAAGGTTTGCAGTTTGTCCACATGATTTAATGCCGTAATGTGTGATTTATGCAGTTTGCTTCATAGCTTTGCAGTTTGTCCATATGATTTGATGTCTTGGCATGAAATTATTTTAGAAATTATACAACATGAAGTTTTCTGTACCATGAACAACCATTCATAGGATGCGGATAAAATGATGTTAGGTCTGT
GTGACCCCATCATACAGTGGCTTTTTTAAGAGGAATGGCTTATATTATATAATAATATGTCAAGGAAATCTGCTTTGTTAATTTTCGAATCTTTGTGTAACCTTACCTAGGCTAGCTAGATGCTCAGCTGGTGTATGATTTCAAGGTGCTGATAGTGTCTAAGAGGACTCTAGGTCTTTACTCAGTAC
>TRINITY_DN118311_c0_g1_i3 from sample A1 / Example unspliced isoform:ATGAAAGTAGGTGCAAAAGGAGTGCAGCTTTACATTTCTCCATGTATGCGTATATGCTAGAATTCCTTGTGCTGCCATGACCATATAGATAACGCCCGTCTTCCAACGTTTTCAAAGAATAGAATATGGCTCACCAAGTCCTTGGACGATCGATACAATCTACTTACCTCTTCATATCTCATGTCAATGCACTTTTTAGG
CCTCTTCCTCCTGTCATCTGCTTGTCACCGCCCTCGATTGTTTCCTCGAGGAAGCAGCGATGCTCATCATCAGCCTTCAGGTCTCTTCTGTCCACTTCACCATTCCAACGCCCTGTTGCACTGAGTCAACATAAAACCCAACCTGTTATTTCTCAAGAAGAGGAAGGAGATTATGAAGATGAAGAAGAATACGAAAGCGA
AAGAGGAGATTATGAAGAAGAAGAAGATAATGAAAAAAACAAGGTGGTGGTATCTTCCGGGGAACAGAAACAAGTAACTAATCCTGCCAGAAGGATTCCTGAATTGACAGTCAAAGAGAAGAAAGAGCTTAGTGCCTATGCTCACAGTCTTGGCAAGAAACTCAAATGTCATCAGGTCGGCAAGTCAGGTGTGACTTCTT
CTTTAGAAGTTTCTGTTAGTGATGCGCTTGAAGCAAATGAGCTTATAAAGTTGAAGGTGCACAATACTTGTCCAGATGAACTAGATGTTGTAGCTTCTAGATTGCAAGAAACAACAAGGTCAGTGGTAGTTGGGCAAATTGGCCGGACCTTTATACTTTATAGACCCAGTCTTCGTAAGGTTCAAACAAAAGAGGAAAAG
AAGCCACCACAAAGGTCGCAAAGAAGAAGTATCGCAAAATCTGCAGGATGGgtaagattatctcaagtatgtgattaacatgtgattacctatttattcagttatgcttaactccatttctggatactcaaatggatgcagAAGAATAGGCCAACTTAAGATTGATTGGCAGAAGATGTTCGGCTCAAAGGATGAAATTA
AGTTTAGTCAATCAAATCGGCTTCACATAATCATCAATTTTGCTGCAGAAAAATTGTTTTGCTGTATGGTTCAATTCTTCTTATATGAGACATTTATTCATGTCTTTCATTAAGCACAACTGAATTAATCATTTTCTTTTGGGGAAAGTAATCGAGGAGAGACATGCAGCCTCGTGAAAGTATTTGGAAAGTGAAACCCC
TTACTATAGTTTTCAGAAGGAATTCTTGCTTGATGTGACAACCTCCTTCCAAGCTTTATTGTGGGTTCCAGATTACTTATGATTTAAGCAGTCTGGTTCAAAGGTTTGCAGTTTGTCCACATGATTTAATGCCGTAATGTGTGATTTATGCAGTTTGCTTCATAGCTTTGCAGTTTGTCCATATGATTTGATGTCTTGGC
ATGAAATTATTTTAGAAATTATACAACATGAAGTTTTCTGTACCATGAACAACCATTCATAGGATGCGGATAAAATGATGTTAGGTCTGTGTGACCCCATCATACAGTGGCTTTTTTAAGAGGAATGGCTTATATTATATAATAATATGTCAAGGAAATCTGCTTTGTTAATTTTCGAATCTTTGTGTAACCTTACCTAG
GCTAGCTAGATGCTCAGCTGGTGTATGATTTCAAGGTGCTGATAGTGTCTAAGAGGACTCTAGGTCTTTACTCAGTAC