NA ----> NA
Intron 1 GTGAGAAACT ... CCGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.13 | 144 | 14.8 | 30.8 |
| A2 | 8.97 | 87 | 8.9 | 20.1 |
| A3 | 10.68 | 97 | 12.5 | 17.5 |
| A4 | 3.16 | 94 | 3.1 | 29.9 |
| A5 | 9.87 | 63 | 7.3 | 11.9 |
| A6 | 12.52 | 413 | 60.9 | 90 |
| A7 | 14.45 | 588 | 102.5 | 98.1 |
| A8 | 14.5 | 681 | 117 | 136.6 |
| A9 | 13.22 | 556 | 87.3 | 97.5 |
| A10 | 11.01 | 479 | 62.1 | 80 |
>TRINITY_DN91990_c0_g1_i1 from sample A1 / Example spliced isoformAGGCCTTACCGCTCAGTGCCACCATACATATCCTTAGCGTCGATCGCCTCGAACCTGCGAACCTCAATTCACAACAAAATTCCTAATATCTGTAATTGGATCTGTAGAGGGAGGTGATGGCACAAGGATTTCGTTTCAATCGTCTACTACTATGCGGCCGCACACTGGCATCGGCATCCCATGAGAAAATCTTGGAACCG
AGCCATAGTTGGAGTTGGAGATGTGTGAATGTGAGGCGCAAATCTGGATGGTCCAGGAGGGGTAATGGCAATGGCAATGGCAATGGAAGGGGAAATGGCAAGGGCAAGAAAAGGTTATGGGTGCCTCAGGTAGTAGAGCTGCAGGTGGAATCAGACTCAGATTCAGGAGGTCAGGGGTTCGACTATGTTGGGAGCTCTAA
ACGTCTTGAGAAGCTCATTCACAGGAATATGGCGAAAATGGCGGCCCCCGCTTGGCTTCCTTTTATGCCGGGGATGTCGTATTGGGTGCCCCCGTTCCCGTCTCTAAAATTCGGGGAATACTCCGAAGTTGAAGTTGCATTTGCAGCGAGGAACCCCATGACCGAAGAGGAACTCCTGTCATTTACTACGGCTAGGAGAG
GATGGCCTTCCTCGGCTTACTATCTTCAAGATGATTCTTCTCATGCGGTAGAGACAACACCAGAGAAGAATGGAAAACCAGAAGAAGAAAGTTGAATATTTATTTGATCAATCAAGTGTTTTAGTCCTTGGAGGTCAAATTTTCCCCAACTGAAATTTCTATTAAATCAGAGGAAGGAGGAAAAACAAAATCTTGAAGCT
GGACAATGTTGGTCTCTTTTATGCGCATGTATTAGAGTGGGCAAGAAGTACTAGATGGAGCATTGAGAATTGAAATTTTATGCATAGAGAATTAAACCATATAGACTATTTGTAAAGACACTAATGTGAGAAGAAGAAAAATTATATTAATGCTCACTGTTAACCAAATAGACAGGTCAATAGGAATAGAGTTACAGTGC
CTAGCAATAGCAAGAGGGGTGCTAAAAGTGACTCCCTATATAGTAGGATAAAGTAAGTAAAGTCATCCATTAGAGGATTGGTTCATAATTGTGGGTTTCCTTGTTATGGGTACATCTGCACATGATACATGGCCTTTTTTGGTGAGTTCTAAACTTCTATGGTAATATAACTACAGTTTGGATACATACTACAAGAAATG
TTTAGAGTTGAGTTAGATGAAGTCTTTGATAAGCACTATAAGATGCCGTATTTGAAGGATGTTTGTAAGTTGTTGGGTGGAAATGTTACCACCCTCAAATGGTAAACTGTAAGCAACATTCAGTAAGACATCCTTGCATTTTTATGTATGATGTATATGTAGATATCCCTGTTTGTAGATATGTAGATCTGTACTAATCA
ATTTACA
>TRINITY_DN91990_c0_g1_i2 from sample A1 / Example unspliced isoform:AGGCCTTACCGCTCAGTGCCACCATACATATCCTTAGCGTCGATCGCCTCGAACCTGCGAACCTCAATTCACAACAAAATTCCTAATATCTGTAATTGGATCTGTAGAGGGAGGTGATGGCACAAGGATTTCGTTTCAATCGTCTACTACTATGCGGCCGCACACTGGCATCGGCATCCCATGAGAAAATCTTGGAACCG
AGCCATAGTTGGAGTTGGAGATGTGTGAATGTGAGGCGCAAATCTGGATGGTCCAGGAGGGGTAATGGCAATGGCAATGGCAATGGAAGGGGAAATGGCAAGGGCAAGAAAAGGTTATGGGTGCCTCAGGTAGTAGAGCTGCAGGTGGAATCAGACTCAGATTCAGGAGGTCAGGGGTTCGACTATGTTGGGAGCTCTAA
ACGTCTTGAGAAGCTCATTCACAGGAATATGGCGAAAATGGCGGCCCCCGCTTGGCTTCCTTTTATGCCGGGGATGTCGTATTGGGTGCCCCCGTTCCCGTCTCTAAAATTCGGGGAATACTCCGAAGTTGAAGTTGCATTTGCAGCGAGGAACCCCATGACCGAAGAGGAACTCCTGTCATTTACTACGGCTAGGAGAG
GATGGCCTTCCTCGGCTTACTATCTTCAAGATGATTCTTCTCATGCGGTAGAGACAACACCAGAGAAGAATGGAAAACCAGAAGAAGAAAGTTGAATATTTATTTGATCAATCAAGTGgtgagaaactcacatttgttgttgaacttcatttaatgttctattgcttcctagtgttgtgagattatttaatatttgaagt
gtttaacttgtaaagattcttagaaataaaaatgtgaaactgcaatctaaagatcatgaacaatggcatatgtactgcttgtcattgtccacttgtcgatgtattagtatttactatgcaaaatataatgcttgttaattaccgtttgcagTTTTAGTCCTTGGAGGTCAAATTTTCCCCAACTGAAATTTCTATTAAAT
CAGAGGAAGGAGGAAAAACAAAATCTTGAAGCTGGACAATGTTGGTCTCTTTTATGCGCATGTATTAGAGTGGGCAAGAAGTACTAGATGGAGCATTGAGAATTGAAATTTTATGCATAGAGAATTAAACCATATAGACTATTTGTAAAGACACTAATGTGAGAAGAAGAAAAATTATATTAATGCTCACTGTTAACCAA
ATAGACAGGTCAATAGGAATAGAGTTACAGTGCCTAGCAATAGCAAGAGGGGTGCTAAAAGTGACTCCCTATATAGTAGGATAAAGTAAGTAAAGTCATCCATTAGAGGATTGGTTCATAATTGTGGGTTTCCTTGTTATGGGTACATCTGCACATGATACATGGCCTTTTTTGGTGAGTTCTAAACTTCTATGGTAATA
TAACTACAGTTTGGATACATACTACAAGAAATGTTTAGAGTTGAGTTAGATGAAGTCTTTGATAAGCACTATAAGATGCCGTATTTGAAGGATGTTTGTAAGTTGTTGGGTGGAAATGTTACCACCCTCAAATGGTAAACTGTAAGCAACATTCAGTAAGACATCCTTGCATTTTTATGTATGATGTATATGTAGATATC
CCTGTTTGTAGATATGTAGATCTGTACTAATCAATTTACA