sp|Q8L5Z4|YBEY_ARATH ----> Endoribonuclease YBEY, chloroplastic


Intron 1 GTAGTGAACA ... CACCGGAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A129.41614
A20100
A314.29301
A4441.20.81
A5-1000
A640.245.83.44
A726.675.81.23
A842.825.426
A945.4212.48.612
A1012.3112.20.43



>TRINITY_DN40034_c0_g1_i2 from sample A6 / Example spliced isoform
CTTTTAAAGGTTTACACATTGAGTGACGCACCTCCGTAATAGGCTTCACAGTCCAATCCATTAAACAATGAACAAAGTTCACGTGTAGGCATTTTCATATAATATTTTTTAAAATATCTTATGCTTATCCTTGTGGGAGTCACCCGATTTCATCTCACACTGAAAATAATGGCAGCCATCCGCTTCATCACACAGGGCAG
ACCACCTGCATTTTTTAACAAAATGCAAACTCTCACTGTCAATGTGTTTCTCAGCCCACATCCTAGTTTTCCGTCGAAAGGAGGTATATCGATCGAATCTTCTGCAGCTCCCCGGAGGTTCCTCCGGACTGCCTTGCCTAGGACATCTTACGACCCATGGACGAAGGGAGAAGATGTTTTCTCTGGCGGAAATCGGCCAG
AACGATTATTTTCAGGCGCGAGGGGGTACCGAAGAACGAGGAGGCCTCTGGCGTTGAAGAAACCCCTGCCGGAAAAGGAAAAGGAAAAGGAAATGGAGCTGGACGTGCAAATTGGTATCGAGGAGGAATTGCCAGAGGATGACGAGAACGTTTTGGCATGTTATAGAAGTAACCAAATATCCTCACGAACAGGCGAAGTT
CTCAAAGTGATGCTTTCAAAAGGTGTGATCTACTGCAATATATGCTCATAGGATGGTTGGGTTTCAAAGGAACCGAAGTGTCAAATGTTTACCAGATATTGTCTTACAGGTTGCTCGGCTGGCCCATGAAACATGTTTCGAATAGTGAAATGTCCATTTTTTATCTCTTTTGTCTCAATGGTTTCTTCTCCATTCTGTGG
ATGCATGAGTGGAAGCCATAGAAAGGGTGCTTCATGAGGAGGCTCATGTTAGTTTTCAAATGACTGTTATTATCAATGAAGATAAAAATATGGATTGGATACCTATCATTTTTGTAATTTCCGTTGTATTTTGCTGTTGTGAGAGTGACGTTATCTGTATCTTATGGAAGCTTTATGATGTTGTACATTTTTGTCATATT
CCTTAATATGTTGCATTAATGAGAATCACAGGTTTGTGATCAGTATGTTTTGGAAAAAAATTAAAAAAAAAAC


>TRINITY_DN40034_c0_g1_i4 from sample A6 / Example unspliced isoform:
ATTTTCCCAGGAAAACATACGTTCTTTGATCTTACACCGAATCCTAAGAGTTTATTCTATAATTAAGTCCTGGGAATAGTGTTGTAACTCTGAGGTTCTCTGTTTTCTTTTGCTTGCCTTACAGAATATAGCAGAAAATCTTTGTGTGGATGTTCCCAGGGCAACAAAGTTGGCATTGGACCGGTTAAAAGATTCAAGTT
CTGTAACAAGAGATACGTCCATAGATAATGCGTGTTCATTTGATAACGTGGAGCTATCAATATTACTATGTAATGATAATTTTATCCAGAAGCTAAACAAAGAATGGCGTGATAAAGATGCACCAACAGATGTTCTCTCAATGTCCCAACATATTCCAAAATTTCAAATTCCAACTCTTATGCTGGGAGACATTGTAATT
TCTATAGATACAGCTGCTAGGCAAGCTGAGGAAAGAGGCCAGACACTCCTTGATGAGATACGCATCCTAACGGTACATGGTCTCTTACACCTTTTGGGATATGATCATGAACTAAGTGAGGAGGCTGAAAAAGAGATGGAAAAAGAGGAAGAGTGCATTCTACGTGAACTTGGTTGGAAAGGCAAGGGTTTAATACACAG
CACATTTGTTCTTGTTGAAGATTCCAGCTCAACAAGCACTATAGAAGGAACAAAAGAAAGTATACGGATAACAGACAGTAATAATTGTTAAATATTCACTACAGTTGAAATTTTGCAACAGTTTGTCAAGTATTCATAGTTTTGGCGAAGAACACCATATGGAGAGCTCATCCCTGGCTTCTTCCCTACCACGAGTGATG
CCACTGCCATAGATATCCTCCACCAGGTTTCAGGTGACTTAACAGTGATGATGAATATAAGAGTTATTGAATGTTGTGCACAAATATCGGCAGTAGTGCCTGTACAGCTTTCTTTACCCTATGTATGGACTTGTACGGGAACTTTTCCAGAGGAGACTGAAATTTACAACCAACGTAGTTGGTTTTGTGAAAGTAGTTCA
CACACACAAGCAGACATTTTGGCACAATGACATGCTCTAATTTATTTTCGTAACTTTTTTGATTAGCTGATATATATAAAGATTGGGAGATGCTTTAGTCATCCCTCTATGTTTGTGCCATATATGTCGATGCCTTTACTGCCTTCTTCACCCGAGGACATTAATATAATATAATTTTATTTCATTCTATTTATGTGTCT
CATATATTGGCTTGGATAATTTAAAGTTATGCATGCAGATGTGAGGCCTGCTTCAAATAGAGAAGTGGATTCAAATGTACAAATCCAAGTTTGTTGTCAGATGCCCCTCATTACATCTGTCAATATATGCCTGTCTTATTTGTTGACTTGACAAAGCCCTTCAGAAGAAAAGGTGTTCCTTCATAATGATGAATGGGACT
ATTTCAACTTCTGTCTGAATCTCCCTATTTAAAATTCAGTCGTGGTCACTGTGCAGGCATGTTATAGAAGTAACCAAATATCCTCACGAACAGGCGAAGTTCTCAAAGTGATGCTTTCAAAAGgtagtgaacatcctgactgccaccggaaagGTGTGATCTACTGCAATATATGCTCATAGGATGGTTGGGTTTCAAAG
GAACCGAAGTGTCAAATGTTTACCAGATATTGTCTTACAGGTTGCTCGGCTGGCCCATGAAACATGTTTCGAATAGTGAAATGTCCATTTTTTATCTCTTTTGTCTCAATGGTTTCTTCTCCATTCTGTGGATGCATGAGTGGAAGCCATAGAAAGGGTGCTTCATGAGGAGGCTCATGTTAGTTTTCAAATGACTGTTA
TTATCAATGAAGATAAAAATATGGATTGGATACCTATCATTTTTGTAATTTCCGTTGTATTTTGCTGTTGTGAGAGTGACGTTATCTGTATCTTATGGAAGCTTTATGATGTTGTACATTTTTGTCATATTCCTTAATATGTTGCATTAATGAGAATCACAGGTTTGTGATCAGTATGTTTTGGAAAAAAATTAAAAAAA
AAAC




Intron 2 GTAGTGAACA ... TATTCAATAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A136.84625
A250120
A333.33303
A45510.52
A5100043
A636.23735
A720612
A840.97516
A932.38123.58
A1013.231313



>TRINITY_DN38044_c0_g2_i6 from sample A9 / Example spliced isoform
TCTGTTGCACTTTTAAAGGTTTACACATTGAGTGACGCACCTCCGTAATAGGCTTAAATATCTTGGCTCTCTGTTGCACTTTTAAAGGTTTAAAATATCTTATGCTTATCCTTGTGGGAGTCACCCGATTTCATCTCTCACACTGAAAATACCATAAACATATCCCACATACACATAATCCAACAATCCCATTCTCCTTA
TAAATATCTTGGCTCTCTGTTGCACTTTTAAAGGTTTACACATTGAGTGACGCACCTCCGTAATAGGCTTCACAGTCCAATCCATTAAACAATGAACAAAGTTCACGTGTAGGCATTTTCATATAATATTTTTTAAAATATCTTATGCTTATCCTTGTGGGAGTCACCCGATTTCATCTCACACTGAAAATAATGGCAGC
CATCCGCTTCATCACACAGGGCAGACCACCTGCATTTTTTAACAAAATGCAAACTCTCACTGTCAATGTGTTTCTCAGCCCACATCCTAGTTTTCCGTCGAAAGGAGGTATATCGATCGAATCTTCTGCAGCTCCCCGGAGGTTCCTCCGGACTGCCTTGCCTAGGACATCTTACGACCCATGGACGAAGGGAGAAGATG
TTTTCTCTGGCGGAAATCGGCCAGAACGATTATTTTCAGGCGCGAGGGGGTACCGAAGAACGAGGAGGCCTCTGGCGTTGAAGAAACCCCTGCCGGAAAAGGAAAAGGAAAAGGAAATGGAGCTGGACGTGCAAATTGGTATCGAGGAGGAATTGCCAGAGGATGACGAGAACGTTTTGGCATGTTATAGAAGTAACCAA
ATATCCTCACGAACAGGCGAAGTTCTCAAAGTGATGCTTTCAAAAGGTGTGATCTACTGCAATATATGCTCATAGGATGGTTGGGTTTCAAAGGAACCGAAGTGTCAAATGTTTACCAGATATTGTCTTACAGGTTGCTCGGCTGGCCCATGAAACATGTTTCGAATAGTGAAATGTCCATTTTTTATCTCTTTTGTCTC
AATGGTTTCTTCTCCATTCTGTGGATGCATGAGTGGAAGCCATAGAAAGGGTGCTTCATGAGGAGGCTCATGTTAGTTTTCAAATGACTGTTATTATCAATGAAGATAAAAATATGGATTGGATACCTATCATTTTTGTAATTTCCGTTGTATTTTGCTGTTGTGAGAGTGACGTTATCTGTATCTTATGGAAGCTTTAT
GATGTTGTACATTTTTGTC


>TRINITY_DN38044_c0_g2_i5 from sample A9 / Example unspliced isoform:
TGCAACTTCTGTCTGAATCTCCCTATTTAAAATTCAGTCGTGGTCACTGTGCAGGCATGTTATAGAAGTAACCAAATATCCTCACGAACAGGCGAAGTTCTCAAAGTGATGCTTTCAAAAGgtagtgaacatcctgactgccaccggaaaggtgtgcgtgggttagtttttctgagtatacatgattttctttttatcca
ttgttatttcttttatttgaagatacatcttttgtctgaaattgcttccttgttttattcaatag
GTGTGATCTACTGCAATATATGCTCATAGGATGGTTGGGTTTCAAAGGAACCGAAGTGTCAAATGTTTACCAGATATTGTCTTACAGGTTGCTCGGCTGGCCCATGAAACATGTTTCGAATAGTGAAATGTCCAT
TTTTTATCTCTTTTGTCTCAATGGTTTCTTCTCCATTCTGTGGATGCATGAGTGGAAGCCATAGAAAGGGTGCTTCATGAGGAGGCTCATGTTAGTTTTCAAATGACTGTTATTATCAATGAAGATAAAAATATGGATTGGATACCTATCATTTTTGTAATTTCCGTTGTATTTTGCTGTTGTGAGAGTGACGTTATCTG
TATCTTATGGAAGCTTTATGATGTTGTACATTTTTGTC




Intron 3 GTAAGGCTTT ... TGGCATGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A132.141292.4
A254.95111511.9
A365.224105
A442.278101.8
A525631
A620.9736154.1
A718.8634114.9
A826.7533204.1
A9251253
A1014.432872.5



>TRINITY_DN136037_c4_g1_i3 from sample A1 / Example spliced isoform
ATCGAATCTTCTGCAGCTCCCCGGAGGTTCCTCCGGACTGCCTTGCCTAGGACATCTTACGACCCATGGACGAAGGGAGAAGATGTTTTCTCTGGCGGAAATCGGCCAGAACGATTATTTTCAGGCGCGAGGGGGTACCGAAGAACGAGGAGGCCTCTGGCGTTGAAGAAACCCCTGCCGGAAAAGGAAAAGGAAAAGGA
AATGGAGCTGGACGTGCAAATTGGTATCGAGGAGGAATTGCCAGAGGATGACGAGAACGTTTTGAATATAGCAGAAAATCTTTGTGTGGATGTTCCCAGGGCAACAAAGTTGGCATTGGACCGGTTAAAAGATTCAAGTTCTGTAACAAGAGATACGTCCATAGATAATGCGTGTTCATTTGATAACGTGGAGCTATCAA
TATTACTATGTAATGATAATTTTATCCAGAAGCTAAACAAAGAATGGCGTGATAAAGATGCACCAACAGATGTTCTCTCAATGTCCCAACATATTCCAAAATTTCAAATTCCAACTCTTATGCTGGGAGACATTGTAATTTCTATAGATACAGCTGCTAGGCAAGCTGAGGAAAGAGGCCAGACACTCCTTGATGAGATA
CGCATCCTAACGGTACATGGTCTCTTACACCTTTTGGGATATGATCATGAACTAAGTGAGGAGGCTGAAAAAGAGATGGAAAAAGAGGAAGAGTGCATTCTACGTGAACTTGGTTGGAAAGGCAAGGGTTTAATACACAGCACATTTGTTCTTGTTGAAGATTCCAGCTCAACAAGCACTATAGAAGGAACAAAAGAAAG
TATACGGATAACAGACAGTAATAATTGTTAAATATTCACTACAGTTGAAATTTTGCAACAGTTTGTCAAGTATTCATAGTTTTGGCGAAGAACACCATATGGAGAGCTCATCCCTGGCTTCTTCCCTACCACGAGTGATGCCACTGCCATAGATATCCTCCACCAGGTTTCAGGTGACTTAACAGTGATGATGAATATAA
GAGTTATTGAATGTTGTGCACAAATATCGGCAGTAGTGCCTGTACAGCTTTCTTTACCCTATGTATGGACTTGTACGGGAACTTTTCCAGAGGAGACTGAAATTTACAACCAACGTAGTTGGTTTTGTGAAAGTAGTTCACACACACAAGCAGACATTTTGGCACAATGACATGCTCTAATTTATTTTCGTAACTTTTTT
GATTAGCTGATATATATAAAGATTGGGAGATGCTTTAGTCATCCCTCTATGTTTGTGCCATATATGTCGATGCCTTTACTGCCTTCTTCACCCG


>TRINITY_DN136037_c4_g1_i1 from sample A1 / Example unspliced isoform:
CACCGAATCCTAAGAGTTTATTCTATAATTAAGTCCTGGGAATAGTGTTGTAACTCTGAGGTTCTCTGTTTTCTTTTGCTTGCCTTACAGAATATAGCAGAAAATCTTTGTGTGGATGTTCCCAGGGCAACAAAGTTGGCATTGGACCGGTTAAAAGATTCAAGTTCTGTAACAAGAGATACGTCCATAGATAATGCGTG
TTCATTTGATAACGTGGAGCTATCAATATTACTATGTAATGATAATTTTATCCAGAAGCTAAACAAAGAATGGCGTGATAAAGATGCACCAACAGATGTTCTCTCAATGTCCCAACATATTCCAAAATTTCAAATTCCAACTgtaaggctttggttgctaatgcaaaatagtgtgtgatagttgtaggatcttaatcatc
atagtattctcatgaaatatgtggcataagctaaagttgtggcatgcag
CTTATGCTGGGAGACATTGTAATTTCTATAGATACAGCTGCTAGGCAAGCTGAGGAAAGAGGCCAGACACTCCTTGATGAGATACGCATCCTAACGGTACATGGTCTCTTACACCTTTTGGGATATGATCATGAACTAAGTGAGGAGGCTG
AAAAAGAGATGGAAAAAGAGGAAGAGTGCATTCTACGTGAACTTGGTTGGAAAGGCAAGGGTTTAATACACAGCACATTTGTTCTTGTTGAAGATTCCAGCTCAACAAGCACTATAGAAGGAACAAAAGAAAGTATACGGATAACAGACAGTAATAATTGTTAAATATTCACTACAGTTGAAATTTTGCAACAGTTTGTC
AAGTATTCATAGTTTTGGCGAAGAACACCATATGGAGAGCTCATCCCTGGCTTCTTCCCTACCACGAGTGATGCCACTGCCATAGATATCCTCCACCAGGTTTCAGGTGACTTAACAGTGATGATGAATATAAGAGTTATTGAATGTTGTGCACAAATATCGGCAGTAGTGCCTGTACAGCTTTCTTTACCCTATGTATG
GACTTGTACGGGAACTTTTCCAGAGGAGACTGAAATTTACAACCAACGTAGTTGGTTTTGTGAAAGTAGTTCACACACACAAGCAGACATTTTGGCACAATGACATGCTCTAATTTATTTTCGTAACTTTTTTGATTAGCTGATATATATAAAGATTGGGAGATGCTTTAGTCATCCCTCTATGTTTGTGCCATATATGT
CGATGCCTTTACTGCCTTCTTCACCCG




Intron 4 GTAAATTTGT ... GTGGCTCCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A132.56.303
A243.8114.16.911
A315.8110.702
A419.1712.783
A511.11821
A620.8134.61.89
A717.4233.327
A833.7133.43.917
A921.2718.725
A1030.134.9115



>TRINITY_DN111034_c4_g1_i4 from sample A2 / Example spliced isoform
GCTTCACAGTCCAATCCATTAAACAATGAACAAAGTTCACGTGTAGGCATTTTCATATAATATTTTTTAAAATATCTTATGCTTATCCTTGTGGGAGTCACCCGATTTCATCTCACACTGAAAATAATGGCAGCCATCCGCTTCATCACACAGGGCAGACCACCTGCATTTTTTAACAAAATGCAAACTCTCACTGTCAA
TGTGTTTCTCAGCCCACATCCTAGTTTTCCGTCGAAAGGAGGTATATCGATCGAATCTTCTGCAGCTCCCCGGAGGTTCCTCCGGACTGCCTTGCCTAGGACATCTTACGACCCATGGACGAAGGGAGAAGATGTTTTCTCTGGCGGAAATCGGCCAGAACGATTATTTTCAGGCGCGAGGGGGTACCGAAGAACGAGGA
GGCCTCTGGCGTTGAAGAAACCCCTGCCGGAAAAGGAAAAGGAAAAGGAAATGGAGCTGGACGTGCAAATTGGTATCGAGGAGGAATTGCCAGAGGATGACGAGAACGTTTTGAATATAGCAGAAAATCTTTGTGTGGATGTTCCCAGGGCAACAAAGTTGGCATTGGACCGGTTAAAAGATTCAAGTTCTGTAACAAGA
GATACGTCCATAGATAATGCGTGTTCATTTGATAACGTGGAGCTATCAATATTACTATGTAATGATAATTTTATCCAGAAGCTAAACAAAGAATGGCGTGATAAAGATGCACCAACAGATGTTCTCTCAATGTCCCAACATATTCCAAAATTTCAAATTCCAACTCTTATGCTGGGAGACATTGTAATTTCTATAGATAC
AGCTGCTAGGCAAGCTGAGGAAAGAGGCCAGACACTCCTTGATGAGATACGCATCCTAACGGTACATGGTCTCTTACACCTTTTGGGATATGATCATGAACTAAGTGAGGAGGCTGAAAAAGAGATGGAAAAAGAGGAAGAGTGCATTCTACGTGAACTTGGTTGGAAAGGCAAGGGTTTAATACACAGCACATTTGTTC
TTGTTGAAGATTCCAGCTCAACAAGCACTATAGAAGGAACAAAAGAAAGTATACGGATAACAGACAGTAATAATTGTTAAATATTCACTACAGTTGAAATTTTGCAACAGTTTGTCAAGTATTCATAGTTTTGGCGAAGAACACCATATGGAGAGCTCATCCCTGGCTTCTTCCCTACCACGAGTGATGCCACTGCCATA
GATATCCTCCACCAGGTTTCAGGTGACTTAACAGTGATGATGAATATAAGAGTTATTGAATGTTGTGCACAAATATCGGCAGTAGTGCCTGTACAGCTTTCTTTACCCTATGTATGGACTTGTACGGGAACTTTTCCAGAGGAGACTGAAATTTACAACCAACGTAGTTGGTTTTGTGAAAGTAGTTCACACACACAAGC
AGACATTTTGGCACAATGACATGCTCTAATTTATTTTCGTAACTTTTTTGATTAGCTGATATATATAAAGATTGGGAGATGCTTTAGTCATCCCTCTATGTTTGTGCCATATATGTCGATGCCTTTACTGCCTTCTTCACCCGAGGAC


>TRINITY_DN111034_c4_g1_i3 from sample A2 / Example unspliced isoform:
GCTTCACAGTCCAATCCATTAAACAATGAACAAAGTTCACGTGTAGGCATTTTCATATAATATTTTTTAAAATATCTTATGCTTATCCTTGTGGGAGTCACCCGATTTCATCTCACACTGAAAATAATGGCAGCCATCCGCTTCATCACACAGGGCAGACCACCTGCATTTTTTAACAAAATGCAAACTCTCACTGTCAA
TGTGTTTCTCAGCCCACATCCTAGTTTTCCGTCGAAAGGAGGTATATCGATCGAATCTTCTGCAGCTCCCCGGAGGTTCCTCCGGACTGCCTTGCCTAGGACATCTTACGACCCATGGACGAAGGGAGAAGATGTTTTCTCTGGCGGAAATCGGCCAGAACGATTATTTTCAGGCGCGAGGGGGTACCGAAGAACGAGGA
GGCCTCTGGCGTTGAAGAAACCCCTGCCGGAAAAGGAAAAGGAAAAGGAAATGGAGCTGGACGTGCAAATTGGTATCGAGGAGGAATTGCCAGAGGATGACGAGAACGTTTTGAATATAGCAGAAAATCTTTGTGTGGATGTTCCCAGGGCAACAAAGTTGGCATTGGACCGGTTAAAAGATTCAAGTTCTGTAACAAGA
GATACGTCCATAGATAATGCGTGTTCATTTGATAACGTGGAGCTATCAATATTACTATGTAATGATAATTTTATCCAGAAGCTAAACAAAGAATGGCGTGATAAAGATGCACCAACAGATGTTCTCTCAATGTCCCAACATATTCCAAAATTTCAAATTCCAACTGTAAGGCTTTGGTTGCTAATGCAAAATAGTGTGTG
ATAGTTGTAGGATCTTAATCATCATAGTATTCTCATGAAATATGTGGCATAAGCTAAAGTTGTGGCATGCAGCTTATGCTGGGAGACATTGTAATTTCTATAGATACAGCTGCTAGGCAAGCTGAGGAAAGAGGCCAGACACTCCTTGATGAGATACGCATCCTAACGgtaaatttgttttaatttctagtattggtcct
tggatagtgtgtgcctatatattttgcaattccctttaggtctgattgtttttcaaatgcctttttaatcttacttttgaagtggctccag
GTACATGGTCTCTTACACCTTTTGGGATATGATCATGAACTAAGTGAGGAGGCTGAAAAAGAGATGGAAAAAGAGGAAGAGTGCATTCTACGTGAACTTGGTTGGAAAG
GCAAGGGTTTAATACACAGCACATTTGTTCTTGTTGAAGATTCCAGCTCAACAAGCACTATAGAAGGAACAAAAGAAAGTATACGGATAACAGACAGTAATAATTGTTAAATATTCACTACAGTTGAAATTTTGCAACAGTTTGTCAAGTATTCATAGTTTTGGCGAAGAACACCATATGGAGAGCTCATCCCTGGCTTC
TTCCCTACCACGAGTGATGCCACTGCCATAGATATCCTCCACCAGGTTTCAGGTGACTTAACAGTGATGATGAATATAAGAGTTATTGAATGTTGTGCACAAATATCGGCAGTAGTGCCTGTACAGCTTTCTTTACCCTATGTATGGACTTGTACGGGAACTTTTCCAGAGGAGACTGAAATTTACAACCAACGTAGTTG
GTTTTGTGAAAGTAGTTCACACACACAAGCAGACATTTTGGCACAATGACATGCTCTAATTTATTTTCGTAACTTTTTTGATTAGCTGATATATATAAAGATTGGGAGATGCTTTAGTCATCCCTCTATGTTTGTGCCATATATGTCGATGCCTTTACTGCCTTCTTCACCCGAGGAC