sp|Q9XGN4|GOLS1_AJURE ----> Galactinol synthase 1
Intron 1 GTATAATTAT ... GCTGCTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.62 | 194 | 60 | 4 |
| A2 | 25 | 162 | 54 | 0 |
| A3 | 21.52 | 186 | 51 | 0 |
| A4 | 25.45 | 164 | 56 | 3 |
| A5 | 19.26 | 109 | 26 | 0 |
| A6 | 19.11 | 855 | 202 | 0 |
| A7 | 18.83 | 595 | 138 | 2 |
| A8 | 17.7 | 386 | 83 | 0 |
| A9 | 16.44 | 544 | 107 | 0 |
| A10 | 21.81 | 563 | 157 | 0 |
>TRINITY_DN101443_c0_g1_i9 from sample A4 / Example spliced isoformGAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCGAAGAGAGCGTA
CGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCC
AGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCGGATATGGGAGTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTTTATGCAGTGATGGACTGCTTTTGCGAGCATACCTGGAGCCACACTCGGCAATAC
AAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAATTAGGGCAGCCGCCCTCTCTCTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCAGCAAACTGACCTACGATACGCTCCTTCAATTCCTGAGAATCACCGTACCCACGCCCTTTGCGGAGCAGGACTTGCTGAACATGTTCTTTAACAA
GATGTACAGCCCTATTCCCTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCGGAGAACGTGGATTTGGACAAAGTGAAGGTCGTCCATTACTGTGCAGCTGGATCGAAACCGTGGAGGTACACGGGCAAGGAAGAGAATATGGAGAGAGAGGATATAAAGATGTTGGTAAAGAAATGGTGGGATATTTATG
ACGACCCGTCCTTGGACTTCAAATCGACTGACCCGATACCCGATGCAGAGACCCGCTCTGAGCTGCAGCAGATGGCTAGCAACTCCATACTGGCTGTTGCCATTCCTCGACCGAACCCTTTGTTGTCTCTTTCGCCTGCTGCTTAGGGAGCTTGACTCCGTTATCCGTCGGCGGAAGTTCGACTCTCATGCAGTGCAGTG
TATGCTTTCCAAGTAGTCACGCAGTTCCTTCACATTATTTGTGAAACATACAACACAAGTTGTTTGTGTTGTATGTCGATAGTATGCTCGTTCAACTTGACAACGTCTTTATCCATCAGGTCAGAGAATTTCTGGTATGATGAACAGTTCTCTTGATAAGAAAATAATGAAGCAGCAGATTTTCTGTTCAAAGAAGCATT
TGATGGTGATCCTGGGTCTTCCACTGGGAAGAATGGGTGGAAGAGCAGATGGCTTTTTCCGGTTCTATGAGTTCTTTTTTTCCAGAAGTATTCTAAGTTGTGTTTTTTTCCGTTTTGATGGCCTGATATGACTTACTTTTATCTAGCAAATGAATTGTATATATTTCTAGTTCTTGATGGTGGATTATGAACTAGAAAAA
ATAATATACAGATGTAACAGATATTTTACATGAGTCCAGATATTATTCTAGACAAGTGTTATGTATTTTTTGATTTCATGAAAATAACAAAATATGGTTTTTTTAGATAAAAA
>TRINITY_DN101443_c0_g1_i8 from sample A4 / Example unspliced isoform:GAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCGAAGAGAGCGTA
CGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCC
AGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCGGATATGGGAGgtataattataaccaacgccattcccatttccattcccttttcttgaatctttaatatattactgcttctgttgctatggcggaattgaaaaaggattcttatcttgattatctagctaattaagtatctgaaatctaccttatggg
gtttgtgctgctccagTTTGAAGAATACAGC
Intron 2 GTATAATTAT ... GTTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.55 | 45 | 61 | 0 |
| A2 | 50.56 | 44 | 45 | 0 |
| A3 | 52.63 | 36 | 40 | 0 |
| A4 | 48.31 | 46 | 43 | 1 |
| A5 | 52.5 | 19 | 21 | 0 |
| A6 | 48.19 | 172 | 160 | 27 |
| A7 | 46.41 | 127 | 110 | 30 |
| A8 | 47.22 | 76 | 68 | 37 |
| A9 | 43.92 | 106 | 83 | 34 |
| A10 | 50.4 | 123 | 125 | 24 |
>TRINITY_DN41997_c0_g1_i15 from sample A6 / Example spliced isoformGACGCGGAGCAGAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCG
AAGAGAGCGTACGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGA
AAATCAAATCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGGAGTCCAGATCAATTCATGAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTT
TCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAATATTTCAAATATTGATGTTTAGC
>TRINITY_DN41997_c0_g1_i9 from sample A6 / Example unspliced isoform:GACGCGGAGCAGAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCG
AAGAGAGCGTACGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGA
AAATCAAATCCAGTTCGCCATGGCTTATTATGTTATCAATTATTCCAAGCTCCAGATATGGGAGgtataattataaccaacgccattcccatttccattcccttttcttgaatctttaatgtattaccattcccattcccttttcttggatctttaatggattaccattcctattcccttttcttggatctttaatgtat
tactgcttctgttgccatggcagaaatgaaaaggattcttactaaatgtctgaaatctgtgtcttaccattcccattcccttttcttggatctttaatgtattactgcttctgttgccatggcagaaataaaaaggattcttaccaaatgtctgaaatcggttcattcaatgttgataccccaatctccacgagcccaga
tcaattcatgaacctgtttctatcttggcattggttgttgcagGAGTCCAGATCAATTCATGAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTA
TTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAATATTTCAAATATTGATGTTTAGC
Intron 3 GTATAATTAT ... GCTGCTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.16 | 197 | 28 | 37 |
| A2 | 14.21 | 157 | 33 | 19 |
| A3 | 12.56 | 181 | 29 | 23 |
| A4 | 16.87 | 138 | 25 | 31 |
| A5 | 12.45 | 116 | 18 | 15 |
| A6 | 12.4 | 809 | 138 | 91 |
| A7 | 11.64 | 554 | 91 | 55 |
| A8 | 13.24 | 357 | 61 | 48 |
| A9 | 11.04 | 524 | 70 | 60 |
| A10 | 13.63 | 545 | 98 | 74 |
>TRINITY_DN41997_c0_g1_i1 from sample A6 / Example spliced isoformTTTCAGGCAAGATTTTGGTTATGGTTCTAAAACCCCTTGAAAAACGGGGCGTTTAGCAAGTAAATCAGTCAAAGTCGTGACTCACGAGAACCATAATTTCTATATTGCGAAAGTGCGCCGTCGATTTCTCGTGCAGGACGGGGAATCGATCTCAACCGTTAGCCCAGTGCTTAGGAAGGGAAGAAAGTTCTAGTCGCTCA
TATGGTCAGTAATCGGCTAGAAATCACACGAAATGAGGGGGTGTGGCCCACCCTTTCTGGATTGTTCTTCGTCTTTCATTCCAGACGATTCCATGGAATGCCGTGTAATTTCATTTCATAAGCTGCTACTGTGGATGGCACGGCTGAGCTCTATATAACAACACTGCACTGCAAACAAATCTGTCAAGAGTTGTTTCAGT
TTCCAAACACTCGTCTGTGTAATTGTGAGCGAGATTTTCTTGGCTCGTCTTCTTGTTTATATAGAGAATTCTGATTCAAGAAATGGCTCCGGAGGTGACTGCAGAAGTAGTGATCAACGCTACCGGGGGTAAGGCGGTGGCGGTGAGCAGCCTGCGCGGAGGATACTCGAAGCGAGCGTACATGACGTTCTTGGCTGGAG
CGGGAGATTATGTCAAGGGTGTTGTAGGGCTTGTAAAAGGCCTCCGGAAGGTCAATTCTGCCTACCCCCTCATCGTAGCTGTTCTCCCTGATGTACCGGAGGATCACAGACGGCTTCTTAGAAGCCAGGGCTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTAT
GTTATCAATTATTCCAAGCTCCAGATATGGGAGTTTGAAGAATACAGCAAGTTCATATATTTGGACGCTGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTCTATGCTGTGATGGACTGCTTTTGCGAGAAAACCTGGAGCCACAGTCGGCAATACAAGATCGGTTACTGCCAGCA
GTGCCCGGAGAAGGTGCAGTGGCCAGAAGAATTAGGGCAGCCGCCTTCCCTTTACTTCAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTGACCTACGATACGCTTCTTGAAACGCTGAGAGTCACACCTCCCACGCCCTTCGCGGAGCAGGACTTCCTGAACATGTTCTTCCATAAGGTGTACAAGCCTATTCCTT
TGGCCTACAATCTGGTCTTGGCCATGCTTTGGCGCCACCCGGAGAACGTGGATCTGGACAAAGTGAAAGTCGTCCATTACTGCGCTGCCGGATCGAAGCCGTGGAGGTACACGGGGAAGGAAGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAACGACCCGTCCTTGGACTTC
AAATCAACTGATTCAATACCCGACGCGGAGACCTTGTCTGAGCTGCAACAAATGGCAAGCAACTCCATGCTGGCTGCTGCCATTCCTCGGCCAAACCCTTTGCTCTCCCTTTCGCCTGCTGCTTAGCGGCTTAATTCCGTTATCCGTCGGCGGGAGTTCGATTCTCATGCTGTGCAGTTTATGCTTTCCAAGTGGTGACG
CAGTTGCGTCACATTTATATTTTGTGAAACAAACCACTAGTTGTTTGTGTTGTATATTGATAGCCGAGAGGCGCGTTGTTCCCGGTAATGCGATTACCTTGCGTACCAGTAATGCGAATGCTTTTTTTTTTTTCTTTCATAAAAAAATATAGCTTATTATTAATAACGCGAAATAATAAATAAAACCAATACATCATGAC
ATCAGAAAACATGGATGTGAGTCATATCACACCAGCTTCCAAAGGCAGCAAAGTAATGCGAATGCTTATTGATATTTTAAATTATTGGTTTCCATGTGGAGAAAAGATTATGTAAACCTGC
>TRINITY_DN41997_c0_g1_i2 from sample A6 / Example unspliced isoform:TTTCAGGCAAGATTTTGGTTATGGTTCTAAAACCCCTTGAAAAACGGGGCGTTTAGCAAGTAAATCAGTCAAAGTCGTGACTCACGAGAACCATAATTTCTATATTGCGAAAGTGCGCCGTCGATTTCTCGTGCAGGACGGGGAATCGATCTCAACCGTTAGCCCAGTGCTTAGGAAGGGAAGAAAGTTCTAGTCGCTCA
TATGGTCAGTAATCGGCTAGAAATCACACGAAATGAGGGGGTGTGGCCCACCCTTTCTGGATTGTTCTTCGTCTTTCATTCCAGACGATTCCATGGAATGCCGTGTAATTTCATTTCATAAGCTGCTACTGTGGATGGCACGGCTGAGCTCTATATAACAACACTGCACTGCAAACAAATCTGTCAAGAGTTGTTTCAGT
TTCCAAACACTCGTCTGTGTAATTGTGAGCGAGATTTTCTTGGCTCGTCTTCTTGTTTATATAGAGAATTCTGATTCAAGAAATGGCTCCGGAGGTGACTGCAGAAGTAGTGATCAACGCTACCGGGGGTAAGGCGGTGGCGGTGAGCAGCCTGCGCGGAGGATACTCGAAGCGAGCGTACATGACGTTCTTGGCTGGAG
CGGGAGATTATGTCAAGGGTGTTGTAGGGCTTGTAAAAGGCCTCCGGAAGGTCAATTCTGCCTACCCCCTCATCGTAGCTGTTCTCCCTGATGTACCGGAGGATCACAGACGGCTTCTTAGAAGCCAGGGCTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTAT
GTTATCAATTATTCCAAGCTCCAGATATGGGAGgtataattataactaactccattcccctttcttgaatctttaaatctaatctgccattcccatttccattcccttttcttgaatctttaatatattactgcttctgttgctatggcggaattgaaaaaggattcttatcttgattatctagctaattaagtatctga
aatctaccttatggggtttgtgctgctccagTTTGAAGAATACAGCAAGTTCATATATTTGGACGCTGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTCTATGCTGTGATGGACTGCTTTTGCGAGAAAACCTGGAGCCACAGTCGGCAATACAAGATCGGTTACTGCCAGCAGT
GCCCGGAGAAGGTGCAGTGGCCAGAAGAATTAGGGCAGCCGCCTTCCCTTTACTTCAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTGACCTACGATACGCTTCTTGAAACGCTGAGAGTCACACCTCCCACGCCCTTCGCGGAGCAGGACTTCCTGAACATGTTCTTCCATAAGGTGTACAAGCCTATTCCTTTG
GCCTACAATCTGGTCTTGGCCATGCTTTGGCGCCACCCGGAGAACGTGGATCTGGACAAAGTGAAAGTCGTCCATTACTGCGCTGCCGGATCGAAGCCGTGGAGGTACACGGGGAAGGAAGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAACGACCCGTCCTTGGACTTCAA
ATCAACTGATTCAATACCCGACGCGGAGACCTTGTCTGAGCTGCAACAAATGGCAAGCAACTCCATGCTGGCTGCTGCCATTCCTCGGCCAAACCCTTTGCTCTCCCTTTCGCCTGCTGCTTAGCGGCTTAATTCCGTTATCCGTCGGCGGGAGTTCGATTCTCATGCTGTGCAGTTTATGCTTTCCAAGTGGTGACGCA
GTTGCGTCACATTTATATTTTGTGAAACAAACCACTAGTTGTTTGTGTTGTATATTGATAGCCGAGAGGCGCGTTGTTCCCGGTAATGCGATTACCTTGCGTACCAGTAATGCGAATGCTTTTTTTTTTTTCTTTCATAAAAAAATATAGCTTATTATTAATAACGCGAAATAATAAATAAAACCAATACATCATGACAT
CAGAAAACATGGATGTGAGTCATATCACACCAGCTTCCAAAGGCAGCAAAGTAATGCGAATGCTTATTGATATTTTAAATTATTGGTTTCCATGTGGAGAAAAGATTATGTAAACCTGC
Intron 4 GTGAGTATTT ... GGTGGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.08 | 148.3 | 25.3 | 26.2 |
| A2 | 11.48 | 116.2 | 9.3 | 15 |
| A3 | 11.24 | 183 | 22.7 | 23.1 |
| A4 | 19.96 | 97.6 | 12.3 | 24 |
| A5 | 11.04 | 113.4 | 6 | 14 |
| A6 | 14.68 | 1086.8 | 89.7 | 185.7 |
| A7 | 21.54 | 705.3 | 99.6 | 192.2 |
| A8 | 24.13 | 686.8 | 88.1 | 216.7 |
| A9 | 19.29 | 658.2 | 60.3 | 155.9 |
| A10 | 19.83 | 610.1 | 91.2 | 149.9 |
>TRINITY_DN117429_c0_g1_i11 from sample A1 / Example spliced isoformAATCGATCTCAACCGTTAGCCCAGTGCTTAGGAAGGAAAGAAAGTTCTAGTCGCTCATATGGTCAGTAATCGGCTAGAAATCACACGAAATGAGGGGGTGTGGCCCACCCTTTCTGGATTGTTCTTCGTCTTTCATTCCAGACGATTCCATGGAATGCCGTGTAATTTCATTTCATAAGCTGCTACTGTGGATGGCACGG
CTGAGCTCTATATAACAACACTGCACTGCAAACAAATCTGTCAAGAGTTGTTTCAGTTTCCAAACACTCGTCTGTGTAATTGTGAGCGAGATTTTCTTGGCTCGTCTTCTTGTTTATATAGAGAATTCTGATTCAAGAAATGGCTCCGGAGGTGACTGCAGAAGTAGTGATCAACGCTACCGGGGGTAAGGCGGTGGCGG
TGAGCAGCCTGCGCGGAGGATACTCGAAGCGAGCGTACATGACGTTCTTGGCTGGAGCGGGAGATTATGTCAAGGGTGTTGTAGGGCTTGTAAAAGGCCTCCGGAAGGTCAATTCTGCCTACCCCCTCATCGTAGCTGTTCTCCCTGATGTACCGGAGGATCACAGACGGCTTCTTAGAAGCCAGGGCTGCATTGTCCGT
GAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTATGTTATCAATTATTCCAAGCTCCGGATATGGGAGTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTCTATGCTGTGATGGACTG
CTTTTGCGAGAAAACCTGGAGCCACAGTCGGCAATACAAGATCGGTTACTGCCAGCAGTGCCCGGAGAAGGTGCAGTGGCCAGAAGAATTAGGGCAGCCGCCTTCCCTTTACTTCAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTGACCTACGATACGCTTCTTGAAACGCTGAGAGTCACACCTCCCACGCCCT
TCGCGGAGCAGGACTTCCTGAACATGTTCTTCCATAAGGTGTACAAGCCTATTCCTTTGGCCTACAATCTGGTCTTGGCCATGCTTTGGCGCCACCCGGAGAACGTGGATCTGGACAAAGTGAAAGTCGTCCATTACTGCGCTGCCGGATCGAAGCCGTGGAGGTACACGGGGAAGGAAGAGAACATGGACAGGGAGGAT
ATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAACGACCCGTCCTTGGACTTCAAATC
>TRINITY_DN117429_c0_g1_i2 from sample A1 / Example unspliced isoform:TTGGCCTACAATCTGGTCTTGGCCATGCTTTGGCGCCACCCGGAGAACGTGGATCTGGACAAAGTGAAAGTCGTCCATTACTGCGCTGCCgtgagtattttcattatttcatcatctgaattgcattaaacatgtcccaaatctttggagaactataatccatatctgaaataaacgcggtggtggtggtgcagGGATCG
AAGCCGTGGAGGTACACGGGGAAGGAAGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAACGACCCGTCCTTGGACTTCAAATCAACTGATTCAATACCCGACGCGGAGACCTTGTCTGAGCTGCAACAAATGGCAAGCAACTCCATGCTGGCTGCTGCCATTCCTCGGCCAAA
CCCTTTGCTCTCCCTTTCGCCTGCTGCTTAGCGGCTTAATTCCGTTATCCGTCGGCGGGAGTTCGATTCTCATGCTGTGCAGTTTATGCTTTCCAAGTGGTGACGCAGTTGCGTCACATTTATATTTTGTGAAACAAACCACTAGTTGTTTGTGTTGTATATTGATAGCCGAGAGGCGCGTTGTTCCCGGTAATGCGATT
ACCTTGCGTACCAGTAATGC
Intron 5 GTATAATTAT ... GCCATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.13 | 10.5 | 15.5 | 0 |
| A2 | -1 | 10.5 | 15 | 2 |
| A3 | 82.56 | 7.5 | 17 | 1 |
| A4 | 77.63 | 17 | 22 | 1 |
| A5 | 80.36 | 5.5 | 9.5 | 0 |
| A6 | 56.36 | 68 | 77 | 9 |
| A7 | 42.42 | 48.5 | 45 | 8 |
| A8 | 34.16 | 48 | 36.5 | 13 |
| A9 | 36.31 | 43 | 36.5 | 4 |
| A10 | 41.16 | 53.5 | 54 | 7 |
>TRINITY_DN41944_c0_g1_i13 from sample A8 / Example spliced isoformCACGGGGAATCGATCTGACCGTCGGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAGATGGCAGAGCTCTATA
TAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGAGTGGCCTTCGCGGAGG
ATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAGATTGAGCCCATCTATC
CTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGAAATAAAAAGGATTCTTACCAAATGTCTGAAATCGGTTCATTCAATGTTGATACCCCAATCTCCACGAGCCCAGATCAATTCATGAACCTGTTTCTATCTTGGCATTGGTTGTTGCAGGAGTCCAGATC
AATTCATGAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTC
TAGTAATATTGACAATATTTCAAATATTGATGTTTAGC
>TRINITY_DN41944_c0_g1_i8 from sample A8 / Example unspliced isoform:CACGGGGAATCGATCTGACCGTCGGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAGATGGCAGAGCTCTATA
TAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGAGTGGCCTTCGCGGAGG
ATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAGATTGAGCCCATCTATC
CTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGgtataattataactaacgccattcccatttccattcccttttcttgaatctttaatgtattactgcttctgttgccatggcagaaatgaaaaggattcttactaaatgtctgaaatctgtgtcttacca
ttcccattcccttttcttggatctttaatgtattactgcttctgttgccatggcagAAATAAAAAGGATTCTTACCAAATGTCTGAAATCGGTTCATTCAATGTTGATACCCCAATCTCCACGAGCCCAGATCAATTCATGAACCTGTTTCTATCTTGGCATTGGTTGTTGCAGGAGTCCAGATCAATTCATGAACCTGT
TTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAA
TATTTCAAATATTGATGTTTAGC
Intron 6 GTATAATTAT ... GCCATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 59.22 | 42 | 61 | 0 |
| A2 | 52.33 | 41 | 45 | 2 |
| A3 | 54.05 | 34 | 40 | 1 |
| A4 | 53.09 | 38 | 43 | 1 |
| A5 | 52.5 | 19 | 21 | 0 |
| A6 | 49.38 | 164 | 160 | 9 |
| A7 | 49.33 | 113 | 110 | 8 |
| A8 | 45.64 | 81 | 68 | 13 |
| A9 | 45.86 | 98 | 83 | 4 |
| A10 | 49.6 | 127 | 125 | 7 |
>TRINITY_DN41997_c0_g1_i5 from sample A6 / Example spliced isoformGACGCGGAGCAGAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCG
AAGAGAGCGTACGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGA
AAATCAAATCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGAAATAAAAAGGATTCTTACCAAATGTCTGAAATCGGTTCATTCAATGTTGATACCCCAATCTCCACGAGCCCAGATCAATTCATGAACCTGTTTCTATCTTGGCATTGGTTGTTGCAGGAGTCCAGATCAATTCAT
GAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAAT
ATTGACAATATTTCAAATATTGATGTTTAGC
>TRINITY_DN41997_c0_g1_i9 from sample A6 / Example unspliced isoform:GACGCGGAGCAGAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCG
AAGAGAGCGTACGTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTACCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGA
AAATCAAATCCAGTTCGCCATGGCTTATTATGTTATCAATTATTCCAAGCTCCAGATATGGGAGgtataattataaccaacgccattcccatttccattcccttttcttgaatctttaatgtattaccattcccattcccttttcttggatctttaatggattaccattcctattcccttttcttggatctttaatgtat
tactgcttctgttgccatggcagaaatgaaaaggattcttactaaatgtctgaaatctgtgtcttaccattcccattcccttttcttggatctttaatgtattactgcttctgttgccatggcagAAATAAAAAGGATTCTTACCAAATGTCTGAAATCGGTTCATTCAATGTTGATACCCCAATCTCCACGAGCCCAGA
TCAATTCATGAACCTGTTTCTATCTTGGCATTGGTTGTTGCAGGAGTCCAGATCAATTCATGAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTA
TTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAATATTTCAAATATTGATGTTTAGC
Intron 7 GTATAATTAT ... GTTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 54 | 23 | 27 | 0 |
| A2 | 58.82 | 21 | 30 | 0 |
| A3 | 66.67 | 14 | 28 | 0 |
| A4 | 53.85 | 36 | 42 | 1 |
| A5 | 60.71 | 11 | 17 | 0 |
| A6 | 52.35 | 132 | 145 | 27 |
| A7 | 46.96 | 96 | 85 | 30 |
| A8 | 48.92 | 71 | 68 | 37 |
| A9 | 46.67 | 80 | 70 | 34 |
| A10 | 54.55 | 85 | 102 | 24 |
>TRINITY_DN41944_c0_g1_i11 from sample A8 / Example spliced isoformCACGGGGAATCGATCTGACCGTCGGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAGATGGCAGAGCTCTATA
TAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGAGTGGCCTTCGCGGAGG
ATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAGATTGAGCCCATCTATC
CTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGGAGTCCAGATCAATTCATGAACCTGTTTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAA
GTATTTTTCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAATATTTCAAATATTGATGTTTAGC
>TRINITY_DN41944_c0_g1_i8 from sample A8 / Example unspliced isoform:CACGGGGAATCGATCTGACCGTCGGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAGATGGCAGAGCTCTATA
TAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGAGTGGCCTTCGCGGAGG
ATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAGATTGAGCCCATCTATC
CTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCAGATATGGGAGgtataattataactaacgccattcccatttccattcccttttcttgaatctttaatgtattactgcttctgttgccatggcagaaatgaaaaggattcttactaaatgtctgaaatctgtgtcttacca
ttcccattcccttttcttggatctttaatgtattactgcttctgttgccatggcagaaataaaaaggattcttaccaaatgtctgaaatcggttcattcaatgttgataccccaatctccacgagcccagatcaattcatgaacctgtttctatcttggcattggttgttgcagGAGTCCAGATCAATTCATGAACCTGT
TTCCATCTTGGCGCTGGTTGTTGCTTCAACTTTCAAATCAGTTTGCAAGCCTGCTTTTATCTTGGTGTTGGTTGTTGCTTCAAATTTCTATTGCTTGCTTCAAGTATTTTTCTAAATAATATTTTACTGTATTTTTACTTCAACCCTATTTAATATGGATGGTTGAGGTTTCAACTTCTTGTTTCTAGTAATATTGACAA
TATTTCAAATATTGATGTTTAGC
Intron 8 GTATAATTAT ... GATGGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 5.65 | 217 | 16 | 10 |
| A2 | 0.89 | 167 | 0 | 3 |
| A3 | 1.38 | 214 | 2 | 4 |
| A4 | 2.13 | 161 | 5 | 2 |
| A5 | 2.24 | 131 | 0 | 6 |
| A6 | 0.72 | 967 | 4 | 10 |
| A7 | 0.3 | 662 | 2 | 2 |
| A8 | 0.83 | 420 | 3 | 4 |
| A9 | 1.05 | 610 | 2 | 11 |
| A10 | 1.65 | 626 | 2 | 19 |
>TRINITY_DN117429_c0_g1_i5 from sample A1 / Example spliced isoformAATCGATCTCAACCGTTAGCCCAGTGCTTAGGAAGGAAAGAAAGTTCTAGTCGCTCATATGGTCAGTAATCGGCTAGAAATCACACGAAATGAGGGGGTGTGGCCCACCCTTTCTGGATTGTTCTTCGTCTTTCATTCCAGACGATTCCATGGAATGCCGTGTAATTTCATTTCATAAGCTGCTACTGTGGATGGCACGG
CTGAGCTCTATATAACAACACTGCACTGCAAACAAATCTGTCAAGAGTTGTTTCAGTTTCCAAACACTCGTCTGTGTAATTGTGAGCGAGATTTTCTTGGCTCGTCTTCTTGTTTATATAGAGAATTCTGATTCAAGAAATGGCTCCGGAGGTGACTGCAGAAGTAGTGATCAACGCTACCGGGGGTAAGGCGGTGGCGG
TGAGCAGCCTGCGCGGAGGATACTCGAAGCGAGCGTACATGACGTTCTTGGCTGGAGCGGGAGATTATGTCAAGGGTGTTGTAGGGCTTGTAAAAGGCCTCCGGAAGGTCAATTCTGCCTACCCCCTCATCGTAGCTGTTCTCCCTGATGTACCGGAGGATCACAGACGGCTTCTTAGAAGCCAGGGCTGCATTGTCCGT
GAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTATGTTATCAATTATTCCAAGCTCCGGATATGGGAGTTTGAAGAATACAGCAAGTTCATATATTTGGACGCTGACATCCAAGTGTATGACAACATTGATCATCTCTTTGATCTCGCCGACGGCCATTTTTATGCTGCGATGGACTG
CTTTTGTGAGAAAACCTGGAGCCACACTCAGCAGTACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAACTAGGGCTGCCGCCTTCCCTCTACTTTAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTAACCTATGATTCGCTTCTTGAAAGCCTAAGAGTTACGCCTCCTACGCCCT
TTGCGGAGCAGGATTTCCTGAACATGTTCTTCAACAAAGTGTACAAGCCTATTCCTTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGTGCTGCTGGATCGAAGCCGTGGAGGTACACGGGGAAGGAAGAGAACATGGACAGGGAGGAT
ATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAGCGACTCGTCCTTGGACTTCAAATCCACTGACTCGATACCCGATGCAGAGACCCGGTCTGAGCTGCAACAGATGGCTAGCCACTCTATTCTGGCTGCTGCCATTCCTCCGCCAAATCCTTTGCTCTCTCTTTCGCCCGCTGCTTAGCGAGCTTGATTACGATA
GATCGGCGGGAGTTCGATTCTCAGGCAATGCAATTTATGCTTTCCAAGTGGTCACGTAGTGCCGGCGGTCTTTATTGTATGTTGATAGCCGAGAGGCGCGTTGTTGCTATTTAGCTTAAATAGTTTAAAGGGATAAAGTTGGTGTGATGTTGAGCATTTCTGTTATTTTCACAATTCTCTGTGTTGAGCAACGCTCTTAA
ATTTATTATCACAATTCTCCTTTTATTAGGAAGAAGAGTTTGAAAACAATAATTATACTAAGATTTTTTGCAGTGTAGATTAGGTGGT
>TRINITY_DN117429_c0_g1_i3 from sample A1 / Example unspliced isoform:GGGAGATTAGGTTAAGGGCGTTGTTGGCCTTACAAAAGACCTCTGCAAGGTCAATTCCTTCTAGCCTCTCATTGTAGCTGTTCTCCCAAATGTCCCCGAGGAACACAGACTGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTATG
TCATCAATTACTCCAAGCTTCGGATATGGGAGTTCGAAGAATACAGCAAACTCATTTATTTGGATTATCAATTATTCCAAGCTCCGGATATGGGAGgtataattataaccaacgccattcccatttccattcccttttcttgaatctttaatgtattaccattcccattcccttttcttggatctttaatggattaccat
tcctattcccttttcttggatcttaatgtattactgcttctgttgccatggcagaaatgaaaaggattcttactaaatgtctgaaatttgtgtcttatggggtttgtgatggtgcagTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGA
CGGCCATTTGCTGACATCCAAGTGTATGACAACATTGATCATCTCTTTGATCTCGCCGACGGCCATTTTTATGCTGCGATGGACTGCTTTTGTGAGAAAACCTGGAGCCACACTCAGCAGTACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAACTAGGGCTGCCGCCTTCCCTCTACTT
T
Intron 9 GTATAATTAT ... GATGGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.62 | 187.5 | 64.5 | 45 |
| A2 | 18.39 | 158.5 | 48.5 | 23 |
| A3 | 16.58 | 176.5 | 43 | 27 |
| A4 | 20.46 | 148.5 | 48 | 28 |
| A5 | 18.5 | 106 | 22 | 26 |
| A6 | 15.22 | 796.5 | 183.5 | 102 |
| A7 | 13.98 | 557 | 117.5 | 63 |
| A8 | 14.84 | 357 | 77 | 47 |
| A9 | 14.16 | 512.5 | 94 | 75 |
| A10 | 17.84 | 531 | 138 | 92 |
>TRINITY_DN105434_c0_g1_i3 from sample A5 / Example spliced isoformAGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCGAAGAGAGCGTAC
GTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTCCCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAACCAAATCCA
GTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCGGATATGGGAGTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTTTATGCAGTGATGGACTGCTTTTGCGAGCATACCTGGAGCCACACTCGGCAATACA
AGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAATTAGGGCAGCCGCCCTCTCTCTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCAGCAAACTGACCTACGATACGCTCCTTCAATTCCTGAGAATCACCGTACCCACGCCCTTTGCGGAGCAGGACTTGCTGAACATGTTCTTTAACAAG
ATGTACAGCCCTATTCCCTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCGGAGAACGTGGATTTGGACAAAGTGAAGGTCGTCCATTACTGTGCAGCTGGATCGAAACCGTGGAGGTACACGGGCAAGGAAGAGAATATGGAGAGAGAGGATATAAAGATGTTGGTAAAGAAATGGTGGGATATTTATGA
CGACCCGTCCTTGGACTTCAAATCGACTGACCCGATACCCGATGCAGAGACCCGCTCTGAGCTGCAGCAGATGGCTAGCAACTCCATACTGGCTGTTGCCATTCCTCGACCGAACCCTTTGTTGTCTCTTTCGCCTGCTGCTTAGGGAGCTTGACTCCGTTATCCGTCGGCGGAAGTTCGACTCTCATGCAGTGCAGTGT
ATGCTTTCCAAGTAGTCACGCAGTTCCTTCACATTATTTGTGAAACATACAACACAAGTTGTTTGTGTTGTATGTCGATAGTATGCTCGTTCAACTTGACAACGTCTTTATCCATCAGGTCAGAGAATTTCTGGTATGATGAACAGTTCTCTTGATAAGAAAATAATGAAGCAGCAGATTTTCTGTTCAAAGAAGCATTT
GATGGTGATCCTGGGTCTTCCACTGGGAAGAATGGGTGGAAGAGCAGATGGCTTTTTCCGGTTCTATGAGTTCTTTTTTTCCAGAAGTATTCTAAGTTGTGTTTTTTTCCGTTTTGATGGCCTGATATGACTTACTTTTATCTAGCAAATGAATTGTATATATTTCTAGTTCTTGATGGTGGATTATGAACTAGAAAAAA
TAATATACAGATGTAACAGATATTTTACATGAGTCCAGATATTATTCTAGACAAGTGTTATGTATTTTTTGATTTCATGAAAATAACAAAATATGGTTTTTTTAGATAATATGCTTTCCAAGTGGTCACTCAATTCTTATTTGTGAAACACGCCACACAAATTGTTTCTGTTATATATTGACTGGTATGTTTTCCAAGTG
GTCACGCTGTTCCTTCACATTATTTGTGAAA
>TRINITY_DN105434_c0_g1_i7 from sample A5 / Example unspliced isoform:AGTTCACTCACTCAGCGGCATTTGCTTTCTTAGTAACTGAGAGCGAGAGTTTCTTGGCCGCTTTTCTTGTTTATACAGAGAATTGCGATCAAGACGTAGAGATGGCTCCGGAAGTGACTGCAGAAGTGTTGAACAACGCCGCCGGGGGTAAGCCGGTGGCCGTAAGCGGCCTGCGCGGTGGATATTCGAAGAGAGCGTAC
GTGACGTTCTTGGCTGGAACGGGAGATTATGTTAAGGGCGTTGTTGGCCTTGCAAAAGGCCTCCGCAAGGTCAATTCCCCTTACCCTCTCATTGTAGCTGTTCTCCCAGATGTCCCCGAGGAACACAGACGGCTTCTGAGTAGTCAGGGTTGCATTGTCCGTGAAATTGAGCCCATCTATCCTCCGGAAAACCAAATCCA
GTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTCCGGATATGGGAGgtataattataaccaacgccattcccatttccattcccttttcttgaatctttaatgtattaccattcccattcccttttcttggatctttaatggattaccattcctattcccttttcttggatctttaatgtattactgcttctgt
tgccatggcagaaatgaaaaggattcttactaaatgtctgaaatttgtgtcttatggggtttgtgatggtgcagTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTTTATGCAGTGATGGACTGCTTTTGCGAGCATACC
TGGAGCCACACTCGGCAATACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAATTAGGGCAGCCGCCCTCTCTCTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCAGCAAACTGACCTACGATACGCTCCTTCAATTCCTGAGAATCACCGTACCCACGCCCTTTGCGGAGCAGGACTT
GCTGAACATGTTCTTTAACAAGATGTACAGCCCTATTCCCTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCGGAGAACGTGGATTTGGACAAAGTGAAGGTCGTCCATTACTGTGCAGCTGGATCGAAACCGTGGAGGTACACGGGCAAGGAAGAGAATATGGAGAGAGAGGATATAAAGATGTTGGTAA
AGAAATGGTGGGATATTTATGACGACCCGTCCTTGGACTTCAAATCGACTGACCCGATACCCGATGCAGAGACCCGCTCTGAGCTGCAGCAGATGGCTAGCAACTCCATACTGGCTGTTGCCATTCCTCGACCGAACCCTTTGTTGTCTCTTTCGCCTGCTGCTTAGGGAGCTTGACTCCGTTATCCGTCGGCGGAAGTT
CGACTCTCATGCAGTGCAGTGTATGCTTTCCAAGTAGTCACGCAGTTCCTTCACATTATTTGTGAAACATACAACACAAGTTGTTTGTGTTGTATGTCGATAGTATGCTCGTTCAACTTGACAACGTCTTTATCCATCAGGTCAGAGAATTTCTGGTATGATGAACAGTTCTCTTGATAAGAAAATAATGAAGCAGCAGA
TTTTCTGTTCAAAGAAGCATTTGATGGTGATCCTGGGTCTTCCACTGGGAAGAATGGGTGGAAGAGCAGATGGCTTTTTCCGGTTCTATGAGTTCTTTTTTTCCAGAAGTATTCTAAGTTGTGTTTTTTTCCGTTTTGATGGCCTGATATGACTTACTTTTATCTAGCAAATGAATTGTATATATTTCTAGTTCTTGATG
GTGGATTATGAACTAGAAAAAATAATATACAGATGTAACAGATATTTTACATGAGTCCAGATATTATTCTAGACAAGTGTTATGTATTTTTTGATTTCATGAAAATAACAAAATATGGTTTTTTTAGATAATATGCTTTCCAAGTGGTCACTCAATTCTTATTTGTGAAACACGCCACACAAATTGTTTCTGTTATATAT
TGACTGGTATGTTTTCCAAGTGGTCACGCTGTTCCTTCACATTATTTGTGAAA
Intron 10 GTATAATTAT ... GCTTGTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.61 | 156 | 24 | 17 |
| A2 | 14.29 | 108 | 20 | 16 |
| A3 | 12.22 | 158 | 21 | 23 |
| A4 | 17.61 | 138 | 42 | 17 |
| A5 | 16.75 | 82 | 16 | 17 |
| A6 | 14.6 | 781 | 131 | 136 |
| A7 | 13.8 | 506 | 83 | 79 |
| A8 | 14.55 | 329 | 65 | 47 |
| A9 | 11.78 | 468 | 66 | 59 |
| A10 | 13.96 | 453 | 84 | 63 |
>TRINITY_DN109759_c0_g3_i2 from sample A3 / Example spliced isoformGTCGATTTATCGTGCAGCACGGGAGCGATCTGAACCGTCAGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAG
ATGGCAGAGCTCTATATAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGA
GTGGCCTTCGCGGAGGATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAG
ATTGAGCCCATCTATCCTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGGATATGGGAGTTCGAAGAATACAGCAAACTCATTTATTTGGATGCTGACATCCAAGTGTATGACAACATTGATCATCTCTTTGATCTCGCCGACGGCCATTTTTATGCTGCGATGGACTGCTT
TTGTGAGAAAACCTGGAGCCACACTCAGCAGTACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAACTAGGGCTGCCGCCTTCCCTCTACTTTAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTAACCTATGATTCGCTTCTTGAAAGCCTAAGAGTTACGCCTCCTACGCCCTTTG
CGGAGCAGGATTTCCTGAACATGTTCTTCAACAAAGTGTACAAGCCTATTCCTTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGTGCTGCTGGATCGAAGCCGTGGCGGTACACGGGGAAGGAGGAGAACATGGACAGGGAGGATATA
AAGATTTTGGTAAAGAAGTGGTGGGATATCTATAGCGACTCGTCCTTGGACTTCAAATCCACTGACTCGATACCCGATGCAGAGACCCGGTCTGAGCTGCAACAGATGGCTAGCCACTCTATTCTGGCTGCTGCCATTCCTCCGCCAAATCCTTTGCTCTCTCTTTCGCCCGCTGCTTAGCGAGCTTGATTACGATAGAT
CGGCGGGAGTTCGATTCTCAGGCAATGCAATTTATGCTTTCCAAGTGGTCACGTAGTGCCGGCGGTCTTTATTGTATGTTGATAGCCGAGAGGCGCGTTGTTGCTATTTAGCTTAAATAGTTTAAAGGGATAAAGTTGGTGTGATGTTGAGCATTTCTGTTATTTTCACAATTCTCTGTGTTGAGCAACGCTCTTAAATT
TATTATCACAATTCTCCTTTTATTAGGAAGAAGAGTTTGAAAACAATAATTATACTAAGATTTTTTGCAGTGTAGATTAGGTGGTTGAAAGTATTGGTTGTGAAAATTTCTAC
>TRINITY_DN109759_c0_g3_i1 from sample A3 / Example unspliced isoform:GTCGATTTATCGTGCAGCACGGGAGCGATCTGAACCGTCAGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAG
ATGGCAGAGCTCTATATAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGA
GTGGCCTTCGCGGAGGATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAG
ATTGAGCCCATCTATCCTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGGATATGGGAGgtataattataactaacatccttttccattcccttttcttgaatctttaatgtattaatgcttctgttgccatggcggaaatgaaaaggattctttaatgaaatatctaaaat
ctgtgctttgtgcttgtccagTTCGAAGAATACAGCAAACTCATTTATTTGGATGCTGACATCCAAGTGTATGACAACATTGATCATCTCTTTGATCTCGCCGACGGCCATTTTTATGCTGCGATGGACTGCTTTTGTGAGAAAACCTGGAGCCACACTCAGCAGTACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAA
GGTGCAGTGGCCAAAGGAACTAGGGCTGCCGCCTTCCCTCTACTTTAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTAACCTATGATTCGCTTCTTGAAAGCCTAAGAGTTACGCCTCCTACGCCCTTTGCGGAGCAGGATTTCCTGAACATGTTCTTCAACAAAGTGTACAAGCCTATTCCTTTGGCCTACAATC
TGGTCTTGGCCATGCTGTGGCGCCACCCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGTGCTGCTGGATCGAAGCCGTGGCGGTACACGGGGAAGGAGGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAGCGACTCGTCCTTGGACTTCAAATCCACTGAC
TCGATACCCGATGCAGAGACCCGGTCTGAGCTGCAACAGATGGCTAGCCACTCTATTCTGGCTGCTGCCATTCCTCCGCCAAATCCTTTGCTCTCTCTTTCGCCCGCTGCTTAGCGAGCTTGATTACGATAGATCGGCGGGAGTTCGATTCTCAGGCAATGCAATTTATGCTTTCCAAGTGGTCACGTAGTGCCGGCGGT
CTTTATTGTATGTTGATAGCCGAGAGGCGCGTTGTTGCTATTTAGCTTAAATAGTTTAAAGGGATAAAGTTGGTGTGATGTTGAGCATTTCTGTTATTTTCACAATTCTCTGTGTTGAGCAACGCTCTTAAATTTATTATCACAATTCTCCTTTTATTAGGAAGAAGAGTTTGAAAACAATAATTATACTAAGATTTTTT
GCAGTGTAGATTAGGTGGTTGAAAGTATTGGTTGTGAAAATTTCTAC
Intron 11 GTGGTGGTGC ... AGCCGTGGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.86 | 135 | 12 | 40 |
| A2 | 15.32 | 121.6 | 3 | 22 |
| A3 | 13.53 | 159.8 | 7 | 25 |
| A4 | 21.18 | 96.8 | 7 | 26 |
| A5 | 15.73 | 112.6 | 3 | 21 |
| A6 | 22.23 | 1091.2 | 41 | 312 |
| A7 | 26.72 | 746 | 59 | 272 |
| A8 | 27.49 | 765 | 55 | 290 |
| A9 | 24.29 | 688.8 | 35 | 221 |
| A10 | 26.32 | 599 | 35 | 214 |
>TRINITY_DN41944_c0_g1_i4 from sample A8 / Example spliced isoformCACGGGGAATCGATCTGACCGTCGGTCCGGGGCTCAGGAAGGAAGGAAAGAAATTTCTAGTCACTCGTATGAAATACAGCGAGGGAGTGGTGGAGGCCAGCCCTTTCTGGATTGTTCTTCGTCTTTCATTACAGATAATTCCAATTAATGTCGTCTAATTTCATTTCCTAAGCTGCTTCTGGAGATGGCAGAGCTCTATA
TAACAGCATTGCACTGCAAACAAATCTATCAAGAGTTGTTTCAGTTTCCAAGTCTCTTCTGTGTAATTGCGAGCGACATTTTCTTGGCTTGTCTTCTTGTTTATACAGAAAATTCTGATTCAAGAAACGGAGATGGCTGCAGAAGTATTGATCAACGCCACTGGGGGTAAGGCGGTGGCGGTGAGTGGCCTTCGCGGAGG
ATACTCCAGGAGAGCGTACGTGACGTTCTTGGCTGGGGATGGAGATTATGTTAAGGGCGTTGTTGGTCTTGTAAAAGGGCTCCGCAAGGTCAATTCCCCCTACCCTCTCATGGTAGCCGTTCTCCCCGATGTTCCAGAGGAACACAGGCGGCTTCTGAGAAACCAGGGTTGCATTGTCCGTGAGATTGAGCCCATCTATC
CTCCAGAGAACCATGTCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGGATATGGGAGTTCGAAGAATACAGCAAACTCATTTATTTGGATGCTGACATCCAAGTGTATGACAACATTGATCATCTCTTTGATCTCGCCGACGGCCATTTTTATGCTGCGATGGACTGCTTTTGTGAGAAAACCTGG
AGCCACACTCAGCAGTACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAACTAGGGCTGCCGCCTTCCCTCTACTTTAATGCGGGCATGTTTGTGTTCGAGCCCAGCAAGCTAACCTATGATTCGCTTCTTGAAAGCCTAAGAGTTACGCCTCCTACGCCCTTTGCGGAGCAGGATTTCCT
GAACATGTTCTTCAACAAAGTGTACAAGCCTATTCCTTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGCGCTGCTGGATCGAAGCCGTGGCGGTACACGGGGAAGGAGGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGA
AGTGGTGGGATATCTATAGCGACTCGTCCTTGGACTTCAAATCCACTGACTCGATACTCTATGCAGAGACCCGGTCTGAGCTGCAACAGATGGCTAGCCACTCTATTCTGGCTGCTGCCATTCCTCCGCCAAATCCTTTGCTCTCTCTTTCGCCCGCTGCTTAGCGAGCTTGATTACGATAGATCGGCGGGAGTTCGATT
CTCAGGCAATGCAATTTATGCTTTCCAAGTGGTCACGTAGTGCCGGCGGTCTTTATTGTATGTTGATAGCCGAGAGGCGCGTTGTTGCTATTTAGCTTAAATAGTTTAAAGGGATAAAGTTGGTGTGATGTTGAGCATTTCTGTTATTTTCACAATTCTCTGTGTTGAGCAACGCTCTTAAATTTATTATCACAATTCTC
CTTTTATTAGGAAGAAGAGTTTGAAAACAATAATTATACTAAGATTTTTTGCAGTGTAGATTAGGTGGTTGAAAGTATTGGTTGTGAAAATTTCTACTTAAATTTAAATAATTCAATACTTTGATTCTTTATAAACAGTTTTTTTTAATGAGG
>TRINITY_DN41944_c0_g1_i3 from sample A8 / Example unspliced isoform:TTGGCCATGCTGTGGCGCCACCCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGTGCTGCTGTAAGTATTTTCATGATTTCATTCTTTAAATATGTCCCAAATCTTTGGAAAACTATAATCCATATCTGAAATATACGCAGAGAATGTGGATCTGGACAAAGTGAAAGTTGTCCATTACTGCGCTGCTG
GATCGAAGCCGTGGCGgtggtggtgcagggatcgaagccgtggagGTACACGGGGAAGGAGGAGAACATGGACAGGGAGGATATAAAGATTTTGGTAAAGAAGTGGTGGGATATCTATAGCGACTCGTCCTTGGACTTCAAATCCACTGACTCGATACCCGATGCAGAGACCCGGTCTGAGCTGCAACAGATGGCTAGCC
ACTCTATTCTGGCTGCTGCCATTCCTCCGCCAAATCCTTTGCTCTCTCTTTCGCCCGCTGCTTAGCGAGCTTGATTACGATAGATCGGCGGGAGTTCGATTCTCAGGCAATGCAATTTATGCTTTCCAAGTGGTCACGTAGTGCCGGCGGTCTTTATT
Intron 12 GTAAGTATTT ... GGTGGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 3.99 | 265 | 9.5 | 11 |
| A2 | 1.57 | 188 | 9.5 | 3 |
| A3 | 5.65 | 267 | 9 | 16 |
| A4 | 6.11 | 169 | 9.2 | 11 |
| A5 | 2.01 | 195 | 5.7 | 4 |
| A6 | 5.56 | 1666 | 52.5 | 98 |
| A7 | 4.86 | 939 | 23.8 | 48 |
| A8 | 4.15 | 809 | 19 | 35 |
| A9 | 4.11 | 910 | 29 | 39 |
| A10 | 5.35 | 903 | 26 | 51 |
>TRINITY_DN101443_c0_g1_i2 from sample A4 / Example spliced isoformGGGGAATCGATCTCAACCGTTAGCCCAGTGCTTAGGAAGGAAAGAAAGTTCTAGTCGCTCATATGGTCAGTAATCGGCTAGAAATCACACGAAATGAGGGGGTGTGGCCCACCCTTTCTGGATTGTTCTTCGTCTTTCATTCCAGACGATTCCATGGAATGCCGTGTAATTTCATTTCATAAGCTGCTACTGTGGATGGC
ACGGCTGAGCTCTATATAACAACACTGCACTGCAAACAAATCTGTCAAGAGTTGTTTCAGTTTCCAAACACTCGTCTGTGTAATTGTGAGCGAGATTTTCTTGGCTCGTCTTCTTGTTTATATAGAGAATTCTGATTCAAGAAATGGCTCCGGAGGTGACTGCAGAAGTAGTGATCAACGCTACCGGGGGTAAGGCGGTG
GCGGTGAGCAGCCTGCGCGGAGGATACTCGAAGCGAGCGTACATGACGTTCTTGGCTGGAGCGGGAGATTATGTCAAGGGTGTTGTAGGGCTTGTAAAAGGCCTCCGGAAGGTCAATTCTGCCTACCCCCTCATCGTAGCTGTTCTCCCTGATGTACCGGAGGATCACAGACGGCTTCTTAGAAGCCAGGGCTGCATTGT
CCGTGAAATTGAGCCCATCTATCCTCCGGAAAATCAAATCCAGTTCGCCATGGCTTATTATGTTATCAATTATTCCAAGCTCCGGATATGGGAGTTTGAAGAATACAGCAAGCTTATATACCTGGACGCCGACATCCAAGTGTATGACAACATCGATCACCTCTTCGATCTCCCGGACGGCCATTTTTATGCAGTGATGG
ACTGCTTTTGCGAGCATACCTGGAGCCACACTCGGCAATACAAGATCGGTTACTGTCAGCAGTGTCCGGAGAAGGTGCAGTGGCCAAAGGAATTAGGGCAGCCGCCCTCTCTCTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCAGCAAACTGACCTACGATACGCTCCTTCAATTCCTGAGAATCACCGTACCCACG
CCCTTTGCGGAGCAGGACTTGCTGAACATGTTCTTTAACAAGATGTACAGCCCTATTCCCTTGGCCTACAATCTGGTCTTGGCCATGCTGTGGCGCCACCCGGAGAACGTGGATTTGGACAAAGTGAAGGTCGTCCATTACTGTGCAGCTGGATCGAAACCGTGGAGGTACACGGGCAAGGAAGAGAATATGGAGAGAGA
GGATATAAAGATGTTGGTAAAGAAATGGTGGGATATTTATGACGACCCGTCCTTGGACTTCAAATCGACTGACCCGATACCCGATGCAGAGACCCGCTCTGAGCTGCAGCAGATGGCTAGCAACTCCATACTGGCTGTTGCCATTCCTCGACCGAACCCTTTGTTGTCTCTTTCGCCTGCTGCTTAGGGAGCTTGACTCC
GTTATCCGTCGGCGGAAGTTCGACTCTCATGCAGTGCAGTGTATGCTTTCCAAGTAGTCACGCAGTTCCTTCACATTATTTGTGAAACATACAACACAAGTTGTTTGTGTTGTATGTCGATAGTATGCTCGTTCAACTTGACAACGTCTTTATCCATCAGGTCAGAGAATTTCTGGTATGATGAACAGTTCTCTTGATAA
GAAAATAATGAAGCAGCAGATTTTCTGTTCAAAGAAGCATTTGATGGTGATCCTGGGTCTTCCACTGGGAAGAATGGGTGGAAGAGCAGATGGCTTTTTCCGGTTCTATGAGTTCTTTTTTTCCAGAAGTATTCTAAGTTGTGTTTTTTTCCGTTTTGATGGCCTGATATGACTTACTTTTATCTAGCAAATGAATTGTA
TATATTTCTAGTTCTTGATGGTGGATTATGAACTAGAAAAAATAATATACAGATGTAACAGATATTTTACATGAGTCCAGATATTATTCTAGACAAGTGTTATGTATTTTTTGATTTCATGAAAATAACAAAATATGGTTTTTTTAGATAAAAA
>TRINITY_DN101443_c0_g1_i6 from sample A4 / Example unspliced isoform:GTGGCGCCACCCGGAGAACGTGGATTTGGACAAAGTGAAGGTCGTCCATTACTGTGCAGCTgtaagtattttcatcccgcctcgatttgtattcaatatgtgccaaatctttcgaaaactataaatccatatctgaaatatacgcggtgacggtggtgcagGGATCGAAACCGTGGAGGTACACGGGCAAGGAAGAGAAT
ATGGAGAGAGAGGATATAAAGATGTTGGTAAAGAAATGGTGGGATATTTATGACGACCCGTCCTTGGACTTCAAATC