sp|Q9FHK9|MD26B_ARATH ----> Probable mediator of RNA polymerase II transcription subunit 26b
Intron 1 GTATGCTTTT ... TTCTATCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.57 | 15 | 4 | 8 |
| A2 | 25.93 | 10 | 1 | 6 |
| A3 | 42.86 | 4 | 2 | 4 |
| A4 | 55.56 | 2 | 2 | 3 |
| A5 | 50 | 6 | 6 | 6 |
| A6 | 50 | 1 | 0 | 2 |
| A7 | 100 | 0 | 1 | 0 |
| A8 | 0 | 2 | 0 | 0 |
| A9 | 30.77 | 9 | 4 | 4 |
| A10 | 25 | 3 | 1 | 1 |
>TRINITY_DN105870_c0_g1_i4 from sample A3 / Example spliced isoformATATAATAAGGCTGGAAAAGGAGGCCGGCATGAGTTACGGGCAGCCAGAGTAGCTCACTAGAGCTACTTAAAAAAGCAGTACTGTTATTTCTGTCTGTCATTGCAGTTTCCAAATAGGGCTGCATGCATGTTTATTTGACCGTTTGGAATTGTGTGTCTGCACAAATGCAAAAGCAAAGCAGAGCTGGTACTCCCAACTC
CCGAACCCCACAGTTCTATTTTTTCCTTGATAGGCATGTGTTTTGTTGCCATGTTTGTCCAGACAGGCTTTAGGATAGATGAATGAATGGCTTTGATGGTGCTATACTTCTTCTGTATATAGCGTCATTTTAAGCTGTCAATGCCTATGTATATATTACCCTGTAAATGAATGGTTGGGACAAATTTTGAGCTACAGTAT
CAGTTATTCGCACCCATCATCATCATTTACAATCCAATCCTAATATCCATAGCTTGGTATCAAAGCGTGCTTTTAAAGATTTTTCAATTCTCATAAGCAGGAGAGGGTCAACAACAACACTACACCTTTTACTGTGTTATATGGGTAAATTTAGGGGAATTCAAGGCACATTTTTGGGTTTTCTATAGATTTTGGGTTTT
GGGAAAACGTCAAATTCGGTGGTTTGAGCAGCTTCATTTGATCATGAAAGAAAGACTCCATCCAGTCATGTTCATGGGCTGACTTAATACGTAATGTTTGTGGTGGATTTTAAGTTTCTTGATCGATGAAGGGCTTGTGAAATATGATTAGGGTTTAAGGGAGGCTAAAAATGGAGTCTGTGGAAAAATGGAGAAAGTTT
TTCAAAGCTGCAGGGACTGATATCTGTAGTCTGATTGAATATGCAATCCTGGTTGCAGCCTTTGATTGCCCAAATGAATTCAGGAGGAGGAGAGATAGGATTGCACAGAGATTGTATGCATCTAGGTTTCTCAGGTGCTGTGAGTGTGATGTTGTTACTTCGGCTGAACCCCATGATGACATTGCTGATGATGAGGATGA
ACAGGAGTGTATCAATGACTGCCATGATAAATACAATGAAAATGTAAACAACGACACTGGTGAGGCAGATGAAAATAGGGTTAGCAATTACAGTTATGATGAAGCCGAAGCCCTCACCATAGAGATTGAGGAAGAATCCCAGGCTCTTAAGGAGGTATCCAGGATCAAAGACATTCTTGCAAACCCATATGAGTCTGATA
GTCAGGTGTACGAATGCTTGAGAAGATTGGAACTGATGGAACTCACAGTGGAAACCTTAAAGACAACTGAGATTGGGAAACAAGTTAATCGGTTGCGGAAGCACATTTCAAAGGAAATTCGGTCTATGGTGAAAAGGCTTATAAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTA
GCAGCAATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAA
TGATGGTGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAA
ATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTT
CCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAG
TTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTA
TGCAGACAGTTGGCAGCTTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTC
TTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCATCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCA
>TRINITY_DN105870_c0_g1_i1 from sample A3 / Example unspliced isoform:ATATAATAAGGCTGGAAAAGGAGGCCGGCATGAGTTACGGGCAGCCAGAGTAGCTCACTAGAGCTACTTAAAAAAGCAGTACTGTTATTTCTGTCTGTCATTGCAGTTTCCAAATAGGGCTGCATGCATGTTTATTTGACCGTTTGGAATTGTGTGTCTGCACAAATGCAAAAGCAAAGCAGAGCTGGTACTCCCAACTC
CCGAACCCCACAGTTCTATTTTTTCCTTGATAGGCATGTGTTTTGTTGCCATGTTTGTCCAGACAGGCTTTAGGATAGATGAATGAATGGCTTTGATGGTGCTATACTTCTTCTGTATATAGCGTCATTTTAAGCTGTCAATGCCTATGTATATATTACCCTGTAAATGAATGGTTGGGACAAATTTTGAGCTACAGTAT
CAGTTATTCGCACCCATCATCATCATTTACAATCCAATCCTAATATCCATAGCTTGGTATCAAAGCGTGCTTTTAAAGATTTTTCAATTCTCATAAGCAGGAGAGGGTCAACAACAACACTACACCTTTTACTGTGTTATATGGGTAAATTTAGGGGAATTCAAGGCACATTTTTGGGTTTTCTATAGATTTTGGGTTTT
GGGAAAACGTCAAATTCGGTGGTTTGAGCAGCTTCATTTGATCATGAAAGAAAGACTCCATCCAGTCATGTTCATGGGCTGACTTAATACGTAATGTTTGTGGTGGATTTTAAGTTTCTTGATCGATGAAGGGCTTGTGAAATATGATTAGGGTTTAAGGGAGGCTAAAAATGGAGTCTGTGGAAAAATGGAGAAAGTTT
TTCAAAGCTGCAGGGACTGATATCTGTAGTCTGATTGAATATGCAATCCTGGTTGCAGCCTTTGATTGCCCAAATGAATTCAGGAGGAGGAGAGATAGGATTGCACAGAGATTGTATGCATCTAGGTTTCTCAGGTGCTGTGAGTGTGATGTTGTTACTTCGGCTGAACCCCATGATGACATTGCTGATGATGAGGATGA
ACAGGAGTGTATCAATGACTGCCATGATAAATACAATGAAAATGTAAACAACGACACTGGTGAGGCAGATGAAAATAGGGTTAGCAATTACAGTTATGATGAAGCCGAAGCCCTCACCATAGAGATTGAGGAAGAATCCCAGGCTCTTAAGGAGGTATCCAGGATCAAAGACATTCTTGCAAACCCATATGAGTCTGATA
GTCAGGTGTACGAATGCTTGAGAAGATTGGAACTGATGGAACTCACAGTGGAAACCTTAAAGgtatgctttttatagggtttggagttcttttgcatgcgatgtaacgtcaaacacgctttttccaacttgttcaatatccaacatgttgtgcaatgggttattaacttattctatccagACAACTGAGATTGGGAAACA
AGTTAATCGGTTGCGGAAGCACATTTCAAAGGAAATTCGGTCTATGGTGAAAAGGCTTATAAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCAATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTG
ATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGGTGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGAT
AGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCTAGA
TGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGAC
ATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCT
CTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCTTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGAC
TTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCA
TCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCA
Intron 2 GTTTGTATTC ... TTTTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 61.29 | 6 | 9 | 10 |
| A2 | 33.33 | 12 | 6 | 6 |
| A3 | 38.46 | 4 | 3 | 2 |
| A4 | 39.39 | 10 | 6 | 7 |
| A5 | 36.36 | 7 | 2 | 6 |
| A6 | 76.47 | 2 | 5 | 8 |
| A7 | 40 | 9 | 9 | 3 |
| A8 | 29.73 | 13 | 1 | 10 |
| A9 | 20 | 8 | 3 | 1 |
| A10 | 100 | 0 | 0 | 1 |
>TRINITY_DN41875_c2_g3_i4 from sample A9 / Example spliced isoformGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATAAATCACATTCTCTAGATGAT
GCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCG
TATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCT
CTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTC
AATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCATCTG
GCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACAGCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTCATTTGGGCAATCAGATTCT
GCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTCCACAGATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCTACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGATGGAATGGATGGAACCCTT
GGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGATGATTATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCACATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAAAAACAATGAACATTAGGAT
TGGATTGGAAATGATGATGATGGGTTAGCATAATGGATATTGTAGTTCAAATTTTTCACATTATTTATTCAGGGATATACTTGAATCCGGC
>TRINITY_DN41875_c2_g3_i1 from sample A9 / Example unspliced isoform:GCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATAAATCACATTCTCTAGATGAT
GCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGgtttgtattctcttgttggattgtattttattttcaaatttgttcctaagatagtgttgaattatgaagtggatatttcatattagctcatgaacttggtaactaatggaaaagtgatgctttttttcag
CCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCA
GCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGA
CGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTT
CAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCATCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATC
CTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACAGCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTCATTTGGGCAATCAGATTCTGCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTCCACA
GATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCTACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGATGGAATGGATGGAACCCTTGGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGATGATT
ATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCACATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAAAAACAATGAACATTAGGATTGGATTGGAAATGATGATGATGGGTTAGCATAATGGATATTGTAGTTCAAATTTTTCACATTATTTATTC
AGGGATATACTTGAATCCGGC
Intron 3 GTTTGTATTC ... CTTTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 61.29 | 6 | 9 | 10 |
| A2 | 36.51 | 9.3 | 4.7 | 6 |
| A3 | 34.73 | 4 | 2.3 | 2 |
| A4 | 39.39 | 10 | 6 | 7 |
| A5 | 39.43 | 5.7 | 1.3 | 6 |
| A6 | 76.47 | 2 | 5 | 8 |
| A7 | 64.13 | 3.7 | 6.3 | 3 |
| A8 | 29.73 | 13 | 1 | 10 |
| A9 | 20.5 | 6.3 | 2.3 | 1 |
| A10 | 100 | 0 | 0 | 1 |
>TRINITY_DN34154_c0_g1_i2 from sample A6 / Example spliced isoformTGCTGATATGAAGCTATTTGTACTATAGCAACATGTTAATAAACTTGCTTTTGTGTATTTGTACAGCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGA
CCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAA
TTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTT
TGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGA
CCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCATCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACA
GCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTCATTTGGGCAATCAGATTCTGCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTCCACAGATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCT
ACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGATGGAATGGATGGAACCCTTGGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGATGATTATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCAC
ATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAAAAACAATGGACATTAGGATTGGATTGGAAATGATGATGATGGGTTAGCATAATGGATATTGTAGTTCAAATTTTTCACATTATTTATTCAGGGA
>TRINITY_DN34154_c0_g1_i1 from sample A6 / Example unspliced isoform:TGCTGATATGAAGCTATTTGTACTATAGCAACATGTTAATAAACTTGCTTTTGTGTATTTGTACAGCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGgtttgtattctcttgttggattgtattttattttcaaatt
tgttcctaagatagtgttgaattatgaagtggatatttcatattagctcatgaacttggtaactaatggaatagtgatgcttttttcagCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATA
ACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGT
TTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGA
TGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTG
CTAACCCTATTTCCATCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACAGCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTC
ATTTGGGCAATCAGATTCTGCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTCCACAGATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCTACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGA
TGGAATGGATGGAACCCTTGGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGATGATTATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCACATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAA
AAACAATGGACATTAGGATTGGATTGGAAATGATGATGATGGGTTAGCATAATGGATATTGTAGTTCAAATTTTTCACATTATTTATTCAGGGA
Intron 4 GTAAGTTATT ... ATCAATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 6 | 2 | 3 |
| A2 | 33.33 | 12 | 5 | 6 |
| A3 | 35.29 | 11 | 1.7 | 6 |
| A4 | 0 | 4 | 1.3 | 0 |
| A5 | 16.67 | 5 | 0.7 | 1 |
| A6 | 40 | 6 | 0.7 | 4 |
| A7 | 0 | 2 | 1.3 | 0 |
| A8 | 0 | 1 | 0 | 0 |
| A9 | 0 | 3 | 0 | 0 |
| A10 | 16.67 | 5 | 0 | 1 |
>TRINITY_DN121148_c5_g1_i1 from sample A1 / Example spliced isoformTTATTTTCACTTGCATTATGGGAACTTATCCCAACACAAGTGGAATAACAAATTTTATGGCTTTAAGCTGACTTGGACCTACGTACATGAACACTAAAAGGCTTAAATGTGCTTATTGCTTCTGTTTGTTGTGCTGCAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCA
ATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGG
TGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCA
ATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGGTTTGTATTCTCTTGTTGGATTGTATTTTATTTTCAAATTTGTTCCTAAG
ATAGTGTTGAATTATGAAGTGGATATTTCATATTAGCTCATGAACTTGGTAACTAATGGAATAGTGATGCTTTTTTCAGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACA
GTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCT
TTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAA
CTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCG
>TRINITY_DN121148_c5_g1_i2 from sample A1 / Example unspliced isoform:TTATTTTCACTTGCATTATGGGAACTTATCCCAACACAAGTGGAATAACAAATTTTATGGCTTTAAGCTGACTTGGACCTACGTACATGAACACTAAAAGGCTTAAATGTGCTTATTGCTTCTGTTTGTTGTGCTGCAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCA
ATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAgtaagttattcttggctctctttctcaatattttttgttgttggat
ttcataatacatgctctattttgtgtctaaagtaatgttgttttactgctgaaggcactagttttatttgtatttatttatgatttgtgatcatcaatgacatggttttctgtaatcaatgtagATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGGTGATGAAAAACAATGTACAGTACAACGACC
CCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATT
CAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGGTTTGTATTCTCTTGTTGGATTGTATTTTATTTTCAAATTTGTTCCTAAGATAGTGTTGAATTATGAAGTGGATATTTCA
TATTAGCTCATGAACTTGGTAACTAATGGAATAGTGATGCTTTTTTCAGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGA
AGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATC
TCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTAT
TTACACCAACTCTAATGTATGACATGCAAACCCG
Intron 5 GTTTGTATTC ... CTTTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 61.29 | 6 | 9 | 10 |
| A2 | 33.33 | 12 | 6 | 6 |
| A3 | 38.46 | 4 | 3 | 2 |
| A4 | 39.39 | 10 | 6 | 7 |
| A5 | 36.36 | 7 | 2 | 6 |
| A6 | 76.47 | 2 | 5 | 8 |
| A7 | 40 | 9 | 9 | 3 |
| A8 | 29.73 | 13 | 1 | 10 |
| A9 | 20 | 8 | 3 | 1 |
| A10 | 100 | 0 | 0 | 1 |
>TRINITY_DN47923_c0_g8_i4 from sample A7 / Example spliced isoformGTTAGCAATTTCAGCTATGACGAGGCCGAAGCCCTCACTGAAGAGATGGAGGAAGAATCTCAAGTTCTTAGAGAGGTCTTCAGGATCAAAGACATTCTTGGAAACCCAGATGAGTCCGATAGTCAGCTGTACGAGTGCTTGAGAAGATTGGAATTGATGCAACTCACAGTGGAAACCCTAAAGGCAACTGAGATTGGGAA
ACGAGTTAATCAGTTGCGGAAGCACAATTCAAAGGAAATTCGGTCTATGGTGAAAAGGCTTATAAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCAATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCAC
TTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGGTGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGG
GATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATAAATCACATTCTCTAGA
TGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGAC
ATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCT
CTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCTTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGAC
TTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGTGTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCA
TCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGTCATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACAGCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTCATTTGGGCAATCAGA
TTCTGCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTCCACAGATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCTACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGATGGAATGGATGGAAC
CCTTGGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGATGATTATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCACATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAAAAACAACGGAC
>TRINITY_DN47923_c0_g8_i3 from sample A7 / Example unspliced isoform:GTTAGCAATTTCAGCTATGACGAGGCCGAAGCCCTCACTGAAGAGATGGAGGAAGAATCTCAAGTTCTTAGAGAGGTCTTCAGGATCAAAGACATTCTTGGAAACCCAGATGAGTCCGATAGTCAGCTGTACGAGTGCTTGAGAAGATTGGAATTGATGCAACTCACAGTGGAAACCCTAAAGGCAACTGAGATTGGGAA
ACGAGTTAATCAGTTGCGGAAGCACAATTCAAAGGAAATTCGGTCTATGGTGAAAAGGCTTATAAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCAATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCAC
TTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGGTGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGG
GATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCAATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCT
AGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGgtttgtattctcttgttggattgtattttattttcaaatttgttcctaagatagtgttgaattatgaagtggatatttcatattagctcatgaacttggtaacttggaatagtgatgcttttt
tcagCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTA
ACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTA
AGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCTTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCAGATGAGGTAGT
GTTTCAACTTTCTGGGTTTGCATGAATGTCTTTGATCCTGAAGACCTCTTTGAGAACTTGGGATTCTTCCTCAATCTCTTTGGTGAGGGCTTCAGCCTCGTCATAACTGTAATTGCTAACCCTATTTCCATCTGGCTCACCAGTGCTGCTGTTTACCTTGTCATTGTATTTATCATGGTAGTCCTTGATACCCTCCTTGT
CATCCTCATCATCAATAATGTCATTATGGGGAGCCAAAGCAACAGCATCATACTCACAGCACCTGAGAAATCTGGATGCATAGTCTTTGTGTATAACCCTCTCTCTCCTGAATTCATTTGGGCAATCAGATTCTGCAACCAGAATTGCATATTTAATCAGACTATCAGTGCATATACTTTTGGAACTTTCTCCATGTCTC
CACAGATTCCATTTTTAGCTCCCCTTGAACCCTGGTCCTATTCTACGCAAGCCCTTGATCAATCAAGGAACTTAAAATCCACAAAACAACATTACTTATTAGATCAGGCCCTCGATGGAATGGATGGAACCCTTGGTTCATGATCAAATGCAGCTTTGATGAAACCACCGAATTTGTCTTTCTTGTAAAAACCAAATGAT
GATTATGGGTTGGCATAATCGGTATTGTAGCTCAAATTTTTCACATTATTCATTCAAGGGATATTTGGATATTGTTGGATTTGAAAAAATCTTAAAAGTCATGCATTGAGAAAAAAAACAACGGAC
Intron 6 GTAAGCAAAA ... ATTTGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.89 | 16 | 9 | 4 |
| A2 | 26.83 | 15 | 9 | 2 |
| A3 | 26.32 | 7 | 5 | 0 |
| A4 | 33.33 | 5 | 0 | 5 |
| A5 | 57.14 | 3 | 4 | 4 |
| A6 | 29.41 | 6 | 4 | 1 |
| A7 | 16.13 | 13 | 4 | 1 |
| A8 | 33.33 | 8 | 6 | 2 |
| A9 | 16.67 | 5 | 2 | 0 |
| A10 | 0 | 2 | 0 | 0 |
>TRINITY_DN121148_c5_g1_i1 from sample A1 / Example spliced isoformTTATTTTCACTTGCATTATGGGAACTTATCCCAACACAAGTGGAATAACAAATTTTATGGCTTTAAGCTGACTTGGACCTACGTACATGAACACTAAAAGGCTTAAATGTGCTTATTGCTTCTGTTTGTTGTGCTGCAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCA
ATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGG
TGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCA
ATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTCAGGAAGGATATCAACGAGTAGAAAATGGTTTGTATTCTCTTGTTGGATTGTATTTTATTTTCAAATTTGTTCCTAAG
ATAGTGTTGAATTATGAAGTGGATATTTCATATTAGCTCATGAACTTGGTAACTAATGGAATAGTGATGCTTTTTTCAGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTTCCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACA
GTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAGTTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCT
TTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTATGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAA
CTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCG
>TRINITY_DN121148_c5_g1_i5 from sample A1 / Example unspliced isoform:TTATTTTCACTTGCATTATGGGAACTTATCCCAACACAAGTGGAATAACAAATTTTATGGCTTTAAGCTGACTTGGACCTACGTACATGAACACTAAAAGGCTTAAATGTGCTTATTGCTTCTGTTTGTTGTGCTGCAGTAGCTGGAAGGAACTTGAAGATGAATGGGTGAAGACTGCTGGAAATGTCTCTGTAGCAGCA
ATTGCAGGTACCTTGCCAGATTCTGCTTCACCTGCAACTGCAGATGATGAAAATGGACTCGCCTTGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGATGACTTTGATAGAAATATCTCAGATCTTTGATGGCATGGATGATGATGGGAATCCTCATGTTGCTGAAAACACCAAGAATGATGAATATAATGATGG
TGATGAAAAACAATGTACAGTACAACGACCCCATAAAATAAAGCAATCAGCTCACCCGAGTAGTCTGACAAGGGATAGCAGTCCTCGTGGCAAGCTAGAAACAAACAAGGAGAGGGGGGAATTGAAAAGGAATGCTCAAATTCAGGCTGGCAGGAATTTCCAGGGCCATAGGATTAGTAGCTCAAATCATATAAATACCA
ATGCTGGCCCAGGGAGACCTCAAATAAATTCAGAATGCAAGGGAAATCTAGACAATgtaagcaaaactaggatgtaaatgctatattgaagataatttgtggtttataaatttatggatacagaacattccttgctttttggatcttatgttatgtaactgatcattttagtctattgatctgcaatcttttttcaaaaa
tacaatgaggcaaaatttatgtacctgctagcttgttggatggagcttgtagcagggaaatatacattgctgatatgaagctatttgtactatagcaacatgttaataaacttgcttttgtgtatttgtacagCAGAAATCACATTCTCTAGATGATGCATCTGTTAAATTGAAGCTTGAAGCCACAAAAAGAATGCTTC
AGGAAGGATATCAACGAGTAGAAAATGGTTTGTATTCTCTTGTTGGATTGTATTTTATTTTCAAATTTGTTCCTAAGATAGTGTTGAATTATGAAGTGGATATTTCATATTAGCTCATGAACTTGGTAACTAATGGAATAGTGATGCTTTTTTCAGCCAAGAAACAGCATACCGTTCAAGTAATGGAATTGCAAGACCTT
CCTAAACATGGCCCTAAACTGTTTCATGGTAGGCCATTGTCACAGCATCGTCGTCAGTGGATCAATAACCGAAGACAGTGACATCGTATTGTAAGGTAGAGTAGTGAAGAAGCAGTCCCAGTAGTGTGAAAAGCTCTGATGATGAGAAAGTAACCAGCCTGATTTACATTGTATACTTTCTAGATCTATTGGAGAATTAG
TTCTAGATTGGCTAGAACTCACATATTTCAGAAGCTCAGAGATTGAAATGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCTCTTTTTTGTTGATTTGAAATCTCAGTCCTACGAGGCTAGCCTGAGAGTATGGCACATCATAAGGTAAGGACGCAGAACAGGAAAGTCATTACATGTTTTGATTTTCTGTTTGTA
TGCAGACAGTTGGCAGCCTTGGCAGAGTTTTGGATCCTCTTAGTTTCATTGCTTGACAAGCTCTAGATGTTGCCAAACTGACTTTCAATAAAAATTGGAGGTCGTATTTACACCAACTCTAATGTATGACATGCAAACCCG