sp|B9DFS6|SNX2B_ARATH ----> Sorting nexin 2B
Intron 1 GTAAGGTCTC ... AAGTGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.96 | 85 | 17.5 | 52 |
| A2 | 30.85 | 65 | 13 | 29 |
| A3 | 33.04 | 77 | 8 | 38 |
| A4 | 26.04 | 71 | 6.5 | 25 |
| A5 | 34.62 | 34 | 3.5 | 18 |
| A6 | 35.62 | 47 | 11 | 26 |
| A7 | 27.61 | 118 | 9.5 | 45 |
| A8 | 45.28 | 29 | 5 | 24 |
| A9 | 33.77 | 102 | 5.5 | 52 |
| A10 | 30.81 | 146 | 9 | 65 |
>TRINITY_DN48328_c0_g1_i2 from sample A10 / Example spliced isoformCTGTTGTACTAATATAGAGTTAACATGTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTATATCACAGTCGTCTGAAGATTTTGCAGGATTCCTGCATAATGAATACAATCACCCTCGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACCGAA
CTTTCAATATATTTTCAACTACATAACAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCGTATTTTGGGCTTTTTACATCAAAATTTCCGCCTGCGGC
CACGTTTGTTGTTCGATTCTAGCGCTATAATCGAATTATCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTGGATTTGTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGC
ATATGATTGCTGGAAACCAGAAACGTTGGGATATCAAGCAATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATTACAGGAG
TGTCTTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAA
GGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAGCCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCCGGGGGCAACTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCGGTGTAAGGCGAAGG
TTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAG
ATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGA
CAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGATAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGAGCTAAGTGATGCGTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAG
ACTGAGGAGGGTACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATGCACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGAC
AGTACAAACCCTCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGAAGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATG
AACTTCAAAGATTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTGGGAAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCA
TGCACACATTTCAGCTGTTCGAAGAAGTTTCAATAATTTCACACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGTTGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGA
TCATTTGCAGCATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTTCATGATGTCAGAATTTATTTCTTCCAGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTG
ACAGATTTTATGCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGACATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCAAAATTTCACCCTTCAACTCAGTTTCCTGAG
>TRINITY_DN48328_c0_g1_i6 from sample A10 / Example unspliced isoform:CGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTGGGATATCAAGCAgtaaggtctcatattcatgtatagcatgaccgactgtacttgaaatttgctggaaaatcaagtgcaattgcaagtcccatttgtattgttaatcccta
taacaacttgtttttttgtgaattgtctaaagcaattaagtgtacagATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATT
ACAGGAGTGTCTTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGC
AGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAGCCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCC
Intron 2 GTAAGAGCGA ... TAATCCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.28 | 44 | 24 | 17 |
| A2 | 25.68 | 51 | 21 | 14 |
| A3 | 25.91 | 53.5 | 28 | 9 |
| A4 | 19.04 | 57 | 21 | 5 |
| A5 | 18.68 | 26.5 | 9 | 3 |
| A6 | 21.02 | 34.5 | 15 | 3 |
| A7 | 16.18 | 55.5 | 17 | 3 |
| A8 | 25.01 | 19.5 | 11 | 2 |
| A9 | 21.43 | 43 | 13 | 9 |
| A10 | 19.39 | 54.5 | 15 | 9 |
>TRINITY_DN131874_c0_g3_i4 from sample A1 / Example spliced isoformGTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTATATCACAGTCGTCTGAAGATTTTGCAGGATTCCTGCATAATGAATACAATCACCCTCGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACCGAACTTTCAATATATTTTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTCTCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTCGATTTCTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGT
TGGGATATCAAGCACAATTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATTACAGGAGTGTCTTGTCAT
CTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGG
AACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCAGGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGT
AGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTC
AGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGG
GGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGATAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGAGCTAAGTGATGCGTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGG
TACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATGCACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCC
TCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGAAGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGA
TTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTGGGAAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTT
CAGCTGTTCGAAGAAGTTTCAATAATTTCAAACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGTTGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGC
ATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCATGATGTCAGAATTTATTTCTTCCAGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTAT
GCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGACATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCGG
>TRINITY_DN131874_c0_g3_i2 from sample A1 / Example unspliced isoform:GTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTATATCACAGTCGTCTGAAGATTTTGCAGGATTCCTGCATAATGAATACAATCACCCTCGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACCGAACTTTCAATATATTTTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTCTCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTGGATTTGTCCCAAATTCGTAATTTTCAGTATTTTTTTTACTACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGgtaagagcgaaattaaagtctttaggttgtttgattgttctttgtgtc
catttagcttaagacgaggtttcttggctcgtattttgatgaattcgatgaaggaaatggaggtttcttgatttcttctgaggcttatatgaaaaaaatagaatacttgtgggttgaattttgattattgctcgatccttttgtcttggcggtagatcctcgaggaaggagaggaatacggttaatttattgtagtggaa
gatttttcgtgagtttttcctttggattttgcttatgtatattgctttagtagaatgcttggaagatatggaattctagggtgttttcgagtctcttgtattgcgaattgataaaaagctctgattatttggccgtggaagggaaagatttggttctgaagtgtcggggaagaaactgaaacagattctttcacagaaaa
taaagtaaaagacttcagctagattgttaggttaaataaagcctgtgaactgtgaactaataatttttaagattttttgttaatcctcagAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTTGGATATCAAGCATTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGC
GCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATTACAGGAGTGTCTTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATT
CTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCA
GGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGA
ATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATG
CCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGATAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGAGCTAAGTGATGCGTCTCAGCAG
GCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGGTACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATGCACAATCAGT
TAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCCTCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGAAGAATAGAGG
AATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGATTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTGGGAAAAAGTG
GCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTTCAGCTGTTCGAAGAAGTTTCAATAATTTCAAACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGTTGAAAACCTG
TCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGCATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCATGATGTCAGAATTTATTTCTTCCAGATCATATC
AAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTATGCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGACATTAGCTCAT
AAATATTGACCAAAATATGGCTAATTACCGG
Intron 3 GTCTCATATT ... TTGTCTAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 29.55 | 62 | 21 | 31 |
| A2 | 26.86 | 64 | 18 | 29 |
| A3 | 23.33 | 69 | 11 | 31 |
| A4 | 22.01 | 62 | 15 | 20 |
| A5 | 26.32 | 28 | 6 | 14 |
| A6 | 30.08 | 43 | 12 | 25 |
| A7 | 20 | 104 | 17 | 35 |
| A8 | 31.96 | 33 | 6 | 25 |
| A9 | 23.36 | 82 | 8 | 42 |
| A10 | 21.34 | 129 | 14 | 56 |
>TRINITY_DN121236_c0_g2_i5 from sample A2 / Example spliced isoformCCTGGGCCGATAAATCTTCGGAGTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCTATAATCGAATTCTCCTCCAGAT
TACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTCGATTTCTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTGGGATATCAAGCAGTAAGCAA
TTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATTTATATCGAGTAGTGATTACAGGAGTGTATTGTCATCTTATGCCGAAACTCAT
TCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCA
ATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCAGGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATA
GGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTAGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTA
CCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCT
TTTTGTTGAGGAAGAAAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGATCTAAGTGATGCGTCTCAGCAGAGTCTGCTACCTATCTGAGGTGGTTGACATAGAAAAAGATAATTGTGGTGATGCTTTTCAGCAGCAACCATCAAAACTGCCTTCAGTGAGAAAGTCAATGTCTCAAATTTCACGA
AAAAGACTTCTGCAAACGACAAATTTTAGAAGTGCATTATGAAGTCTCTCCCTCCAGAAAGTTCATGTCAGCTGAGTGAATTGGATGCCATGGATGCAAGACTTGAATCACTCGATACTCATTTACAGTCTTTGCAAAGCCCAGATGGTAAGGCATCAGGATTCCCATGTCGCAATAAAAGTCCTACCCTGCGACGAAAT
ACCCCTTTATCACTTCCAAAAAGTCCTCGATATTCTCCTTATAGCCCTACACTAGTTGATCGTCTTGACATACCTTCTTCTCCTCTGCTACCAAAGAGTACAGATAGTAATGATGTAGGGGTCCAAAGAGAAGAAGTTTCCTCCTCTCCATCCATCAAAGGCTTCATGTCCAACAACATGTAAATGTGATATATGTTTTA
ATAAACAAGTACGATCTAAGAAAGCCAGTGAATTTTCACAGCTGCAGATGTCTGATATAGAGGCTTTAGCACACAAACTTTTGAAACAACTAAAGACAATGCAAACTATTGTTGAAGAGTATCGAACCTTTGAAACTGCTTTGTCTGGTCCATCATCTAAGTTCACGGTG
>TRINITY_DN121236_c0_g2_i7 from sample A2 / Example unspliced isoform:CCTGGGCCGATAAATCTTCGGAGTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCTATAATCGAATTCTCCTCCAGAT
TACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTCGATTTCTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTGGGATATCAAGCAGTAAGgtc
tcatattcatgtatagcatgaccgactgtacttgaaatttgctggcaaatcaagtgcaattgcaagtcccatttgtattgttaatccctataacaacttgtttttttgtgaattgtctaaagCAATTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAG
CTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATTTATATCGAGTAGTGATTACAGGAGTGTATTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTC
CCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGAAAGAGCAAGAAATTGCAAACTC
TCTTGTCCCAGGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGC
AGAAACAGGAATTTATTGAGCAGCGAAGATTAGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGA
GAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGAAAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGATCTAAGTGATGC
GTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGGTACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATG
CACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCCTCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGA
AGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGATTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTG
GGAAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTTCAGCTGTTCGAAGAAGTTTCAATAATTTCACACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGT
TGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGCATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCATGATGTCAGAATTTATTTCTTCC
AGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTATGCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGAC
ATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCAAAATTTCAC
Intron 4 GTAAGGTCTC ... TTGTCTAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.64 | 61.4 | 19.1 | 31 |
| A2 | 32.02 | 61.6 | 14.7 | 29 |
| A3 | 31.61 | 67.4 | 9.1 | 31 |
| A4 | 24.74 | 61.1 | 9.8 | 19.6 |
| A5 | 33.92 | 27.5 | 4.5 | 14 |
| A6 | 37.06 | 42.6 | 11.6 | 25 |
| A7 | 25.32 | 102.5 | 11.4 | 34.6 |
| A8 | 43.6 | 32.4 | 5.3 | 25 |
| A9 | 33.3 | 84.5 | 7.9 | 42 |
| A10 | 29.82 | 132 | 10.1 | 56 |
>TRINITY_DN131874_c0_g3_i4 from sample A1 / Example spliced isoformGTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTATATCACAGTCGTCTGAAGATTTTGCAGGATTCCTGCATAATGAATACAATCACCCTCGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACCGAACTTTCAATATATTTTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTCTCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTCGATTTCTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGT
TGGGATATCAAGCACAATTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATTACAGGAGTGTCTTGTCAT
CTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGG
AACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCAGGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGT
AGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTC
AGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGG
GGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGATAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGAGCTAAGTGATGCGTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGG
TACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATGCACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCC
TCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGAAGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGA
TTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTGGGAAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTT
CAGCTGTTCGAAGAAGTTTCAATAATTTCAAACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGTTGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGC
ATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCATGATGTCAGAATTTATTTCTTCCAGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTAT
GCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGACATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCGG
>TRINITY_DN131874_c0_g3_i1 from sample A1 / Example unspliced isoform:GTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTATATCACAGTCGTCTGAAGATTTTGCAGGATTCCTGCATAATGAATACAATCACCCTCGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACCGAACTTTCAATATATTTTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTCTCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTCGATTTCTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGACGCTTGCTCGGGAGTCGATTCTCGGTCCGAAATAATACCGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGT
TGGGATATCAAGCAgtaaggtctcatattcatgtatagcatgaccgactgtacttgaaatttgctggaaaatcaagtgcaattgcaattcccatttgtattgttaatccctataacaacttgtttttttgtgaattgtctaaagCAATTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATG
ATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGACATATATATCGAGTAGTGATTACAGGAGTGTCTTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCA
TAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAACCTCAGA
AAGAGCAAGAAATTGCAAACTCTCTTGTCCCAGGGGGCAATTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCAGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGT
GTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAA
ACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGATAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATC
TAGAGCATGAGCTAAGTGATGCGTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAGCTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGGTACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGC
CGATTTTATCGAGAGGCAAATGCACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCTTGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCCTCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAGCTGGCAGCTGCCTCGTCAAAAATCTTTGG
AGGTGACAGGGCAAGGAACAGAAGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAGAGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGATTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATG
CAGAGAAGATTGCTGGTGTCTGGGAAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGATCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTTCAGCTGTTCGAAGAAGTTTCAATAATTTCAAACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATAT
ATGTCGAATTGCATGTGAAGGTTGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGAACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGCATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCAT
GATGTCAGAATTTATTTCTTCCAGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGAGTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTATGCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCT
CTGGTATATTGTTGAAACTGACATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCGG
Intron 5 GTAAGAGCGA ... TTGGCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.93 | 19 | 19 | 12 |
| A2 | 36.36 | 28 | 21 | 11 |
| A3 | 36.26 | 29 | 27 | 6 |
| A4 | 34.55 | 18 | 16 | 3 |
| A5 | 48.57 | 9 | 8 | 9 |
| A6 | 40 | 12 | 13 | 3 |
| A7 | 28.81 | 21 | 16 | 1 |
| A8 | 42.86 | 10 | 9 | 6 |
| A9 | 33.33 | 15 | 12 | 3 |
| A10 | 48.28 | 15 | 14 | 14 |
>TRINITY_DN45308_c0_g2_i6 from sample A6 / Example spliced isoformGTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTACATCACCGTCGTCTGAAGATCTTGCAGGATCCCCTCATAATGAATACGATCACCCTTGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACAAAACTTTCAATATATCCTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTCTCCTCCAGGTTACCCCGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTTGATTTGTCCCAAATTCGAAATTTTCAGTATTTTTTTTATGAAGCTTGCTCGGGAGTCGATTCTTGGTCCAAAATAATACCGATCCTCGAGGAAGGAGAGGAATACGGTTTATTTAATGTAGTGGAAGAT
TTTTCAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTGGGATATCAAGCAATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGAAAGCCTTGTCCTAGATCAATCCCCACAGAC
ATTTATATCGAGTAGTGATTACAGGAGTGTATTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATGTTGTGTTTACTCCCTTTGGGGAAGATTCCG
TTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAGCCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCCGGGGGCAACTCATATGTGACTTATCTCATCGTTACTGATACAAATATGCCGGAGTTTGGC
GCTTCAGAATTCGGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGAGAAATATCTTTGCAGATTGGCTGCTCATCC
AGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAACCGGCAAAGGGAGGCAGGGATCTGGTTAGAA
TGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGAAAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGATCTAAGTGATGCGTCTCAGCAG
>TRINITY_DN45308_c0_g2_i4 from sample A6 / Example unspliced isoform:GTGGGGAGGTAATGTAGAGCCGCGCACAGGCTACAGAGTACAGACTCTTCCTTACATCACCGTCGTCTGAAGATCTTGCAGGATCCCCTCATAATGAATACGATCACCCTTGAATATAGTGGCCTGGTCTCTCACGAATCCGAGTTATGCAGTGTCATTCATCTCCCCACAAAACTTTCAATATATCCTCAACTACATAA
CAAATGCAGGAAGTGCAATTTGCCTGGGCCGATAAATCTTCGGATTATATAAACGTACATCTTGACATGAGTCTAAACGAGCATGGAAGTCATCGACATTATGTAACACGACTGAATCGGGGAGGGTTTTCCGTCATATTTTGGGCTTTTTACACCAAAATTTCCGCCTGCGGCCACGTTTGTTGTTCGATTCTAGCGCT
ATAATCGAATTATCCTCCAGATTACCCTGAGAGCGAACCATTATTCGTCAGAATAGTCGAAAATAACAGTGGATTTGTCCCAAATTCGTAATTTTCAGTATTTTTTTTACTACGCTTGCTCGGGAGTCGATTCTCGCTCCAAAATAATACCGgtaagagcgaaattaaagtctttaggttgtttgattgttttttgtgtc
catttagcttaagacgaggtttcttggctcgtattttgatgaattcgatgaaggaaatggaggtttcttgatttcttctgaggtttatatgaaaaaaatagaatacttgcgggttgaattttgattattgctcgatccttttgtcttggctgtagATCCTCGAGGAAGGAGAGGAATACGGTTTATTTAATGTAGTGGAA
GATTTTTCATGAGTTTTTCCTTTGGATTTTGTTTATGTATATTGCTTTAGTAGAATGCTTGGAAGATATGGAATTCTAGGGTGTTTTCGAGTCTCTTGTATTGCGAATTGATAAAAAGCTCTGATTATTTGGCCGTGGAAGGGAAAGATTTGGTTCTGAAGTGTCGGGGAAGAAACTGAAACAGATTCTTTCACAGAAAA
TAAAGTAAAAGACTTCAGCTAGATTGTTAGGTTAAATAAAGCCTGTGAAATGTGAACTAATAATTTTTAATATTTTTTGTTAATCCTCGGAATTTCTGGAAGAAGCGGTGGCATATGATTGCTGGAAACCAGAAACGTTTGGATATTAAGCACTAAGGTCTCATATTCATGTATAGCATGACCGACTGTACTTGAAATTT
GCTGGAAAATCAAGTGCAATTGCAAGTCCCATTTGCATTGTTAATCCCTATAAAAACTTGCTTTTTTGTGAATTGTCTAAAGCAATTAAGTGTACAGATCTGCTTTCTGCATTGCAAGCCAGTTGACACGGCAGTATGATGGGCTCCGAGAATGACGAAGCTCAAGAAGCGCACCTTTTCACCTCCACAGAAGCAATGGA
AAGCCTTGTCCTAGATCAATCCCCACAGACATTTATATCGAGTAGTGATTACAGGAGTGTATTGTCATCTTATGCCGAAACTCATTCATTGCCTCCTTCGGAAGATCCCTTGCAATCTTCCTTTAAAGATTCACATCATAAGAGCTTCAAAGATGACTTCCCCGATGATTCTTTTGTGGAGCCTCCTTCCTACGCAGATG
TTGTGTTTACTCCCTTTGGGGAAGATTCCGTTGTTGGAAATGGTAACGGCAGTGCAAGGGAAACAGGGAACTCATTTTTGTCTCAATCTGCCTCATCAAGCTCCGAATACATGAATATTAAAGTAGCACAGCCTCAGAAAGAGCAAGAAATTGCAAACTCTCTTGTCCCCGGGGGCAACTCATATGTGACTTATCTCATC
GTTACTGATACAAATATGCCGGAGTTTGGCGCTTCAGAATTCGGTGTAAGGCGAAGGTTTCGAGATGTAGTAACTTTGGCTGATAGGCTTGCGGAATCTTATCGGGGATTCTTCATTCCTCCCCGCCCCGACAAAAGTGTTGTTGAAAGCCAGGTTATGCAGAAACAGGAATTTATTGAGCAGCGAAGATTTGCACTGGA
GAAATATCTTTGCAGATTGGCTGCTCATCCAGTAATCAGGAAGAGCATTGAATTGAGATTATTTCTTCAGGCTCAAGGAAAGCTACCCTTACCCAGCACGACAGACATGGCTTCACGAATGCTTGACGGTGCTGTGAAACTACCTCGGCAACTATTTGGAGAGGGCAATGCCGCATGTTCAGCTCAAGATGTCGCTCAAC
CGGCAAAGGGAGGCAGGGATCTGGTTAGAATGTTCAAGGAGCTAAGGCAGTCTGTGACAATTGATTGGGGAGGAGTAAAGCCTCTTTTTGTTGAGGAAGAAAAGGAATTTTTGGAAAAGAAAGAAAAATTACAGGATCTAGAGCATGATCTAAGTGATGCGTCTCAGCAGGCCGAGGTACTTGTTAAAGCGCAGCAAGAG
CTTGGAGAAACAATGGGAGAACTTGGTTTAGCGTTTATCAAATTATCGAAGTTTGAGACTGAGGAGGGTACTTTAAACTCTCAGAGAGTCCGTGCAGCTGATGCCAAACGTGTGGCAACTGCTGCTGTTAAAGCAAGCCGATTTTATCGAGAGGCAAATGCACAATCAGTTAAACATTTGGATAAGCTGCATGAGTACCT
TGGCTTGATGCAAGCTGTACACACAGCATTTTCAGACAGATCAAATGCTTTATTGACAGTACAAACCCTCTTAACTGACATCTCTTCTATGAATTCCCGAATTGAAAAACTGGCAGCTGCCTCGTCAAAAATCTTTGGAGGTGACAGGGCAAGGAACAGAAGAATAGAGGAATTAAAGGATACAATAAAAGTAACAGAAG
AGGCACGGGATTGTGCAGTGAAAGAATATGAACGCATCAAGGAAAACAATAGAAATGAACTTCAAAGATTTGAAACAGAAAGGCGAAATGACTTCTTCAACATGTTGAAAGGATTTGTTTATAATCAGGTAGGATATGCAGAGAAGATTGCTGGTGTCTGGGGAAAAGTGGCTGAGGAAACCAGTGGTTACGCAGGTAGA
TCAGAGGATTCTGTGCTCTTTGGCACTCATGGCTAGTATGCATTTATTGGCAGTTCATGCACACATTTCAGCTGTTCGAAGAAGTTTCAATAATTTCAAACAAGGAGTGCCACCAAAGCCGCTTGAAAGTCTATATATATGTCGAATTGCATGTGAAGGTTGAAAACCTGTCATTTCTTTTGACAGCAAGTTACCTTCGA
ACAATAATGAACAAATTAAAGAATCTTGAATGTCTAATATGTAGTTGAAACATAGGATCATTTGCAGCATTCATCCTGTAAACGATATGACCGATTTGAATGTTTTCCAAAATGGCATCAATTCATGGTGTTTTCCATGATGTCAGAATTTATTTCTTCCAGATCATATCAAATTTGTAATAGGCTTCGCTGCAATTAGA
GTTAACTTTGCCCTACTTGGAGGGACATCATGTTGCACACTCTCATTAACTTTCGTGACAGATTTTATGCCGGAGAGCATAAATTTGTCCAACCATGTTTAAAAAAATTAAGAAGTTTGTATTTTGCATATTTTTGCTCTGGTATATTGTTGAAACTGACATTAGCTCATAAATATTGACCAAAATATGGCTAATTACCA
AAATTTCACCCTTCAACTCAGTTTCCTGATTTTTCATAGTTTCTTCTATATACATTCACTGCCCATGAAATTTAGACTACTGAATTCTTAAGATTTATTCATGCACAAAACAGTGC