NA ----> NA
Intron 1 GTAGGCCTAA ... ATATTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.13 | 26 | 4 | 6 |
| A2 | 17.07 | 17 | 2 | 5 |
| A3 | 23.08 | 30 | 3 | 15 |
| A4 | 24.53 | 20 | 5 | 8 |
| A5 | 18.52 | 11 | 4 | 1 |
| A6 | 19.59 | 39 | 7 | 12 |
| A7 | 23.08 | 30 | 9 | 9 |
| A8 | 19.33 | 48 | 6 | 17 |
| A9 | 16.13 | 39 | 5 | 10 |
| A10 | 19.15 | 19 | 2 | 7 |
>TRINITY_DN40316_c0_g2_i3 from sample A7 / Example spliced isoformGACCCGAGTTGATTAAGTTTCTGGAATTCAGTAAACTATTGCTTAGAACCTGATACAAGATGCATATGCTCATCTTTTGTGTTAAAGACATGGTAAAGCAGATGTTGCAAACTTTTAATGCTAATGTGTTTTTGTTCTTCAGATATTCTCTTGGAGCTGCTACTAGAAAGAAACCTAGCTATTGCCTCCTTCCTGAGTCA
AGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATGGAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGGTTGTAGCTCATCAAGCTGTTCAATTATTCAGGTCACTAGGGGACCGTAGCTGTGCAG
TGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGAAATAATGAAATGGCTCAATAGGCAAGAGAGCCAACCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGGGAGGCTTGTCAATTTGGAAGACCAGCAGAAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACCGT
TTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAGCAACTCTTGGCATGTCATCTCATCTAAAAAGTTCAGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAATGGTGAAAGTGATGCAGTGAATGGAGATGAAAAACAATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGTAC
GGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGTCAGTTTCAAAGGCATATACTTGATGATCCTAAAAACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGCTCCAGTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGTAG
ATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTCTGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTTCACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCTTTCGAAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGCAA
AAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTTGATTACAAATTTTTTTTATTGATATTCTTCGTTCCAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAAAGCCTCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTTAG
ATCAATTAAAATATGGGTTATCTGACTAAGTTGCAGGAAACTGGCCCCCTG
>TRINITY_DN40316_c0_g2_i1 from sample A7 / Example unspliced isoform:TTAACTATCCTCGGTGCCAGTGTCACTTTAACCACTGAGTTATGATAGTTACTCAGGATAGTGTTTGTTTTTACCGGTTCATCTCTCATCTTAAAATTACATATGACTCATCCTAAAACCTCACCAAAACCTCAAAACCCAAGGGATAAGTAGGGCAAACAAAACTCTCAGCAGCATATTTGTCAACATTATCGCTCTGC
GAGGCATTGTGTTGAACCCACAAAAGCCTGCAAGCCGAAGCCGAGGCTGAAGATGAAGTCGGAAAAAAGAATCACCAACTTTATCAAGTTGTTAGCCGAGCAGCTGTACACACAGTTCACCACTCAAGAGTTAGCGGAAGCCCTCTTATCTTCAGCAACAACACTTGAAAAACTGCTGAAATCTTCCATAGAAAATCTCC
CCCCATCATCTCTTAAACAAACCCTCGTCTGCCATGACCGCCTTCCCCAGTTACTTCAACTCCTCCGTCAACAACTTCAAGCCCTCCAATCCACAGAACCCCAGAAGTTATCGTTACCGTCGGACGATGACCGCAGCAAAACCCTTAAAGAAGCTGTGGACGAATTTGTGAAGGATTTTCGCGACGGAACCCTAGAAACC
CTCAAGTCTCGTCAAACTTTCGGCCGTCTGTTGCAGGTAAACGACGAACCCCCTGTCGAGCTCCTTTGGTCTTTTGCCGCCGTCAAACTACTAGAATCAAGGTCGCCAACGGCGGATTCCGTCTCAGAAATCGTAACGGATGGCAGCAATGTAGAAACCCTAGTGGAGGGCGTCGGTTCGCGAATATCCATTGCAAAAGC
CCTGTTTCAGTGTTTTACAGCATGCACAGTGGGGCGGAATTGCAGTGGCTCCACCTCAATAGCTGCTTTGGTTCCCGTCATCGTTATGTTATCCGAAGCTGTCAAAGAATTCTCAGAGCATTCTAATGGCAAGCTTCTGAACAAATCAGAGAAGAAAACTTTTAAGAATCTGAAGAATTTAGTGGCAGAAGTAGTTAGTT
ATATAGCTGTCTGTGGACGCAAAAACCGCAGTTTTTCTTCATTTAATTTGCCGAAGTCCCTCTCCTGCGGCATTGCTTTACTAGGGCTTATCAACGTCCGGCGGACAGGAAAAGGTTCAGAGCTTTCTTTTGAAAGAGATATGGAGGAGTTTTTCCCGTTGACATCACCGTCGATACAGACGGCTTTGCTGGATGAAGGC
TGCAGTGTTGAATATTTGGCTAGTGTGGTCATTCTGGAGGCTACTCTATTGCGATTGGTTGTCGAGGTGATTGATCGGCGAAGAGCGTTGAAGCGGCAAGAAAACTGCGGTTCTGTGGCCAAAGACGGTGCACTTCGTCAAAATTTGAGGATTTTGGCAGTCAATTGCATCGCCACTGCAAAAAGTCAATCTTTCTTTGA
TATTCTCTTGGAGCTGCTACTAGAAAGAAACCTAGCTATTGCCTCCTTCCTGAGTCAAGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATGGAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGG
TTGTAGCTCATCAAGCTGTTCAATTATTCAGgtaggcctaataaaggaatgcatgcaggattagctaaacttgaagtttatgttctcttatctatgcattgtcaatatcaagggcgttgtgatatttacagGTCACTAGGGGACCGTAGCTGTGCAGTGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGA
AATAATGAAATGGCTCAATAGGCAAGAGAGCCAACCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGGGAGGCTTGTCAATTTGGAAGACCAGCAGAAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACCGTTTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAG
CAACTCTTGGCATGTCATCTCATCTAAAAAGTTCAGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAATGGTGAAAGTGATGCAGTGAATGGAGATGAAAAACAATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGTACGGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGT
CAGTTTCAAAGGCATATACTTGATGATCCTAAAAACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGCTCCAGTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGTAGATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTC
TGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTTCACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCTTTCGAAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGCAAAAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTT
GATTACAAATTTTTTTTATTGATATTCTTCGTTCCAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAAAGCCTCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTTAGATCAATTAAAATATGGGTTATCTGACTAAGTTGCAGGAAACTG
GCCCCCTG
Intron 2 GTTAGTTACT ... ATGCCCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 3.85 | 25 | 0 | 1 |
| A2 | 20 | 28 | 2 | 7 |
| A3 | 5 | 19 | 0 | 1 |
| A4 | 21.62 | 29 | 0 | 8 |
| A5 | 18.75 | 13 | 0 | 3 |
| A6 | 9.09 | 40 | 0 | 4 |
| A7 | 1.85 | 53 | 1 | 1 |
| A8 | 8.89 | 41 | 2 | 4 |
| A9 | 7.89 | 35 | 0 | 3 |
| A10 | 12.33 | 64 | 0 | 9 |
>TRINITY_DN106638_c0_g1_i1 from sample A2 / Example spliced isoformGGATAGTGTTTGTTTTTACCGGTTCATCTCTCATCTTAAAATTACATATGACTCATCCTAAAACCTCACCAAAACCTCAAAACCCAAGGGATAAGTAGGGCAAACAAAACTCTCAGCAGCATATTTGTCAACATTATCGCTCTGCGAGGCATTGTGTTGAACCCACAAAAGCCTGCAAGCCGAAGCCGAGGCTGAAGATG
AAGTCGGAAAAAAGAATCACCAACTTTATCAAGTTGTTAGCCGAGCAGCTGTACACACAGTTCACCACTCAAGAGTTAGCGGAAGCCCTCTTATCTTCAGCAACAACACTTGAAAAACTGCTGAAATCTTCCATAGAAAATCTCCCCCCATCATCTCTTAAACAAACCCTCGTCTGCCATGACCGCCTTCCCCAGTTACT
TCAACTCCTCCGTCAACAACTTCAAGCCCTCCAATCCACAGAACCCCAGAAGTTATCGTTACCGTCGGACGATGACCGCAGCAAAACCCTTAAAGAAGCTGTGGACGAATTTGTGAAGGATTTTCGCGACGGAACCCTAGAAACCCTCAAGTCTCGTCAAACTTTCGGCCGTCTGTTGCAGGTAAACGACGAACCCCCTG
TCGAGCTCCTTTGGTCTTTTGCCGCCGTCAAACTACTAGAATCAAGGTCGCCAACGGCGGATTCCGTCTCAGAAATCGTAACGGATGGCAGCAATGTAGAAACCCTAGTGGAGGGCGTCGGTTCGCGAATATCCATTGCAAAAGCCCTGTTTCAGTGTTTTACAGCATGCACAGTGGGGCGGAATTGCAGTGGCTCCACC
TCAATAGCTGCTTTGGTTCCCGTCATCGTTATGTTATCCGAAGCTGTCAAAGAATTCTCAGAGCATTCTAATGGCAAGCTTCTGAACAAATCAGAGAAGAAAACTTTTAAGAATCTGAAGAATTTAGTGGCAGAAGTAGTTAGTTATATAGCTGTCTGTGGACGCAAAAACCGCAGTTTTTCTTCATTTAATTTGCCGAA
GTCCCTCTCCTGCGGCATTGCTTTACTAGGGCTTATCAACGTCCGGCGGACAGGAAAAGGTTCAGAGCTTTCTTTTGAAAGAGATATGGAGGAGTTTTTCCCGTTGACATCACCGTCGATACAGACGGCTTTGCTGGATGAAGGCTGCAGTGTTGAATATTTGGCTAGTGTGGTCATTCTGGAGGCTACTCTATTGCGAT
TGGTTGTCGAGGTGATTGATCGGCGAAGAGCGTTGAAGCGGCAAGAAAACTGCGGTTCTGTGGCCAAAGACGGTGCACTTCGTCAAAATTTGAGGATTTTGGCAGTCAATTGCATCGCCACTGCAAAAAGTCAATCTTTCTTTGATATTCTCTTGGAGCTGCTACTAGAAAGAAACCTAGCTATTGCCTCCTTCCTGAGT
CAAGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATGGAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGGTTGTAGCTCATCAAGCTGTTCAATTATTCAGGTCACTAGGGGACCGTAGCTGTGC
AGTGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGAAATAATGAAATGGCTCAATAGGCAAGAGAGCCAACCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGGGAGGCTTGTCAATTTGGAAGACCAGCAGAAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACC
GTTTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAGCAACTCTTGGCATGTCATCTCATCTAAAAAGTTCAGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAAAGGTGAAAGTGATGCAGTGAATGGAGATGAAAAACAATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGT
ACGGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGTCAGTTTCAAAGGCATATACTTGATGATCCTAAAAACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGCTCCAGTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGT
AGATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTCTGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTTCACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCTTTCGAAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGC
AAAAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTTGATTACAAATTTTTTTTATTGATATTCTTCGTTCCAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAAAGCCTCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTT
AGAT
>TRINITY_DN106638_c0_g1_i3 from sample A2 / Example unspliced isoform:CTGCTACTAGAAAGAAACCTAGCAATTGCCTCCTTCCTGgttagttacttcccatctgttgatctctgaaaataaaattttgaacttggttttaacataatgcatgccaagatggatttgaaagttgttcacaacaacactcattgtagaactaggttttaattttctaactctttttttctgtaaatgatcataaaggg
ctttacaagcttgtcttgatcactaattcttgtcttaatgccctcagAGTCAAGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATGGAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGGTTGTA
GCTCATCAAGCTGTTCAATTATTCAGGTCACTAGGGGACCGTAGCTGTGCAGTGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGAAATAATGAAATGGCTCAATAGGCAAGAGAGCCAACCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGGGAGGCTTGTCAATTTGGAAGACCA
GCAGAAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACCGTTTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAGCAACTCTTGGCATGTCATCTCATCTAAAAAGTTCAGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAAAGGTGAAAGTGATGCAGTGAATGGAGATGAAA
AACAATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGTACGGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGTCAGTTTCAAAGGCATATACTTGATGATCCTAAAAACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGC
TCCAGTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGTAGATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTCTGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTTCACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCT
TTCGAAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGCAAAAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTTGATTACAAATTTTTTTTATTGATATTCTTCGTTCCAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAA
AGCCTCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTTAGAT
Intron 3 GTAAGTTACT ... GATGCTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.27 | 24 | 11 | 7 |
| A2 | 21.88 | 25 | 12 | 2 |
| A3 | 36 | 8 | 5 | 4 |
| A4 | 36.84 | 6 | 5 | 2 |
| A5 | 37.5 | 10 | 6 | 6 |
| A6 | 23.81 | 24 | 9 | 6 |
| A7 | 26.32 | 28 | 13 | 7 |
| A8 | 26.03 | 27 | 7 | 12 |
| A9 | 31.51 | 25 | 10 | 13 |
| A10 | 18.18 | 36 | 10 | 6 |
>TRINITY_DN38050_c0_g1_i2 from sample A8 / Example spliced isoformAAACCCAAGGGATAAGTAGGGCAAACAAAACTCTCAGCAGCATATTTGTCAACATTATCGCTCTGCGAGGCATTGTGTTGAACCCACAAAAGCCTGCAAGCCGAAGCCGAGGCTGAAGATGAAGTCGGAAAAAAGAATCACCAACTTTATCAAGTTGTTAGCCGAGCAGCTGTACACACAGTTCACCACTCAAGAGTTAG
CGGAAGCCCTCTTATCTTCAGCAACAACACTTGAAAAACTGCTGAAATCTTCCATAGAAAATCTCCCCCCATCATCTCTTAAACAAACCCTCGTCTGCCATGACCGCCTTCCCCAGTTACTTCAACTCCTCCGTCAACAACTTCAAGCCCTCCAATCCACAGAACCCCAGAAGTTATCGTTACCGTCGGACGATGACCGC
AGCAAAACCCTTAAAGAAGCTGTGGACGAATTTGTGAAGGATTTTCGCGACGGAACCCTAGAAACCCTCAAGTCTCGTCAAACTTTCGGCCGTCTGTTGCAGGTAAACGACGAACCCCCTGTCGAGCTCCTTTGGTCTTTTGCCGCCGTCAAACTACTAGAATCAAGGTCGCCAACGGCGGATTCCGTCTCAGAAATCGT
AACGGATGGCAGCAATGTAGAAACCCTAGTGGAGGGCGTCGGTTCGCGAATATCCATTGCAAAAGCCCTGTTTCAGTGTTTTACAGCATGCACAGTGGGGCGGAATTGCAGTGGCTCCACCTCAATAGCTGCTTTGGTTCCCGTCATCGTTATGTTATCCGAAGCTGTCAAAGAATTCTCAGAGCATTCTAATGGCAAGC
TTCTGAACAAATCAGAGAAGAAAACTTTTAAGAATCTGAAGAATTTAGTGGCAGAAGTAGTTAGTTATATAGCTGTCTGTGGACGCAAAAACCGCAGTTTTTCTTCATTTAATTTGCCGAAGTCCCTCTCCTGCGGCATTGCTTTACTAGGGCTTATCAACGTCCGGCGGACAGGAAAAGGTTCAGAGCTTTCTTTTGAG
AGAGATATGGAGGAGTTTTTCCCGTTGACATCACCGTCGATACAGACGGCTTTGCTGGATGAAGGCTGCAGTGTTGAATATTTGGCTAGTGTGGTCATTCTGGAGGCTACTCTATTGCGATTGGTTGTCGAGGTGATTGATCGGCGAAGAGCGTTGAAGCGGCAAGAAAACTGCGGTTCTGTGGCCAAAGACGGTGCACT
TCGTCAAAATTTGAGGATTTTGGCAGTCAATTGCATCGCCACTGCAAAAAGTCAATCTTTCTTTGATATTCTCTTGGAGCTGCTACTAGAAAGAAACCTAGCTATTGCCTCCTTCCTGAGTCAAGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATG
GAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGGTTGTAGCTCATCAAGCTGTTCAATTATTCAGGTCACTAGGGGACCGTAGCTGTGCAGTGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGAAATAATGAAATGGCTCAATAGGCAAGAGAGCCAA
CCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGGGAGGCTTGTCAATTTGGAAGACCAGCAGAAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACCGTTTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAGCAACTCTTGGCATGTCATCTCATCTAAAAAGTTC
AGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAATGGTGAAAGTGATGCAGTGAATGGAGATGAAAAACAATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGTACGGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGTCAGTTTCAAAGGCATATACTTGATGATCCTAAAA
ACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGCTCCAGTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGTAGATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTCTGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTT
CACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCTTTCGAAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGCAAAAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTTGATTACAAATTTTTTTTATTGATATTCTTCGTTC
CAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAAAGCCTCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTTAGATCAATTAAAATATGGGTTATCTGACTAAGTTGCAGGAAACTGGCCCCCTGTTATTTCAGTTCCTCGAAACGTTTTA
GGTACTGAAATGTGTTCCAAATGCGTTAGAAATGGATTGAAATGTTTTTCTTTCCTTTAGCGCATTTTGGGTTTGAAAAGGTTTGTTTGGCCTTTGTCTGTTGTTTGGGTTTGAAAAATGTTGGAAAAATGTGAGGGTGATTTATTATTATTACTTTTTATATCATAAAATGATATGTAAAATTTT
>TRINITY_DN38050_c0_g1_i1 from sample A8 / Example unspliced isoform:AAACCCAAGGGATAAGTAGGGCAAACAAAACTCTCAGCAGCATATTTGTCAACATTATCGCTCTGCGAGGCATTGTGTTGAACCCACAAAAGCCTGCAAGCCGAAGCCGAGGCTGAAGATGAAGTCGGAAAAAAGAATCACCAACTTTATCAAGTTGTTAGCCGAGCAGCTGTACACACAGTTCACCACTCAAGAGTTAG
CGGAAGCCCTCTTATCTTCAGCAACAACACTTGAAAAACTGCTGAAATCTTCCATAGAAAATCTCCCCCCATCATCTCTTAAACAAACCCTCGTCTGCCATGACCGCCTTCCCCAGTTACTTCAACTCCTCCGTCAACAACTTCAAGCCCTCCAATCCACAGAACCCCAGAAGTTATCGTTACCGTCGGACGATGACCGC
AGCAAAACCCTTAAAGAAGCTGTGGACGAATTTGTGAAGGATTTTCGCGACGGAACCCTAGAAACCCTCAAGTCTCGTCAAACTTTCGGCCGTCTGTTGCAGGTAAACGACGAACCCCCTGTCGAGCTCCTTTGGTCTTTTGCCGCCGTCAAACTACTAGAATCAAGGTCGCCAACGGCGGATTCCGTCTCAGAAATCGT
AACGGATGGCAGCAATGTAGAAACCCTAGTGGAGGGCGTCGGTTCGCGAATATCCATTGCAAAAGCCCTGTTTCAGTGTTTTACAGCATGCACAGTGGGGCGGAATTGCAGTGGCTCCACCTCAATAGCTGCTTTGGTTCCCGTCATCGTTATGTTATCCGAAGCTGTCAAAGAATTCTCAGAGCATTCTAATGGCAAGC
TTCTGAACAAATCAGAGAAGAAAACTTTTAAGAATCTGAAGAATTTAGTGGCAGAAGTAGTTAGTTATATAGCTGTCTGTGGACGCAAAAACCGCAGTTTTTCTTCATTTAATTTGCCGAAGTCCCTCTCCTGCGGCATTGCTTTACTAGGGCTTATCAACGTCCGGCGGACAGGAAAAGGTTCAGAGCTTTCTTTTGAG
AGAGATATGGAGGAGTTTTTCCCGTTGACATCACCGTCGATACAGACGGCTTTGCTGGATGAAGGCTGCAGTGTTGAATATTTGGCTAGTGTGGTCATTCTGGAGGCTACTCTATTGCGATTGGTTGTCGAGGTGATTGATCGGCGAAGAGCGTTGAAGCGGCAAGAAAACTGCGGTTCTGTGGCCAAAGACGGTGCACT
TCGTCAAAATTTGAGGATTTTGGCAGTCAATTGCATCGCCACTGCAAAAAGTCAATCTTTCTTTGATATTCTCTTGGAGCTGCTACTAGAAAGAAACCTAGCTATTGCCTCCTTCCTGAGTCAAGATGAGGAGATCTTGTTGAGAGGCGTGCTTTATGAGTCAACAACATTGGTTAATTATGCCTTTTTGAGGCAACATG
GAGAAAATCAAACAAATGAGCCAAATTCTGGGGACAAAATAAACAAAATTTTCTTGAATAGAATGGTTGTAGCTCATCAAGCTGTTCAATTATTCAGGTCACTAGGGGACCGTAGCTGTGCAGTGTCCTTTTCAAAAGCCTTCTCAAGCATTCCTGTCCCTTCTGAAATAATGAAATGGCTCAATAGGCAAGAGAGCCAA
CCAAAGTATCCTGAAGCATTAAGTCAGAATCCCCAGGCTCTTATTGgtaagttactcttcaatttcatatctaaatttagttttttctgcttgtgcttcatatgccattaatttcttacaaacatggctgccttccttttagaacttttttcccaagtttaccttgtgataatattttatctttccttttgtccgattta
ttttcagcacagttttactggttgttacagatgtaatatgaaatatcagagcatgacattaaattaatttataatgttgtccaccattgttataatatgatgattatttgctccaatactttgttggctgtcaacccatactattctttttgcttgtttctgatgctttagGGAGGCTTGTCAATTTGGAAGACCAGCAG
AAGTTAAAGCAGATTGTGAATAAGCACTCTGTGTTTAATCCAAACCGTTTACCTGCTGAGAAGGTTGAGTCAAGCGGCAGGTCAAATGAAGCAACTCTTGGCATGTCATCTCATCTAAAAAGTTCAGCAGAGATTGAAGATGACCTCTATTTTGTAGACAAAAATGGTGAAAGTGATGCAGTGAATGGAGATGAAAAACA
ATCTGTGGGAAAGTCTTTTATACTAGCTGCTCATAGTATGGTTGGTACGGGAAATAATGGAAAGAGAAAGAAAACTAAAAAACAGAAAAGTCAGTTTCAAAGGCATATACTTGATGATCCTAAAAACAAAAATACACTACCGGAATCAGGCTCTGATTTGAGCCTGAGTGAAGCGAGTGATTTAGAGCTTGAAGGCTCCA
GTAAAAAGCCAAAAAGGTCAAGGATCGAGACTGAAAATGTTTCTGTAGATTAATTGCCAGATTCAGATGTGTATTCTTGGGCATCAATGTCTGGCGAAGTCTTTATTGTGAAGGTCCCTATTCTTCACTCAGCAGGAAATGACCAAGCATGAAGTTGACCTGCAGAGATGCAAAATGGAAGCTTTGCGTGGAAGCTTTCG
AAAAAAGTTCAATGGGGCATGTTCTACTAATGATGTTTGTATTAGCAAAAATGGTGGAAGGTCTTCTATGAGAAAATATTTATGTCATGTTGATTACAAATTTTTTTTATTGATATTCTTCGTTCCAGTTCTTCCACCTTACCCTTACTGAGGAATGGCCAGGTCGGCTGAAATAGATACACGTGCTGTTTCCAAAAGCC
TCATGTTTGAAGTTTTAAATTCTTCATTGTTGTTACCAACTTGTTTAGATCAATTAAAATATGGGTTATCTGACTAAGTTGCAGGAAACTGGCCCCCTGTTATTTCAGTTCCTCGAAACGTTTTAGGTACTGAAATGTGTTCCAAATGCGTTAGAAATGGATTGAAATGTTTTTCTTTCCTTTAGCGCATTTTGGGTTTG
AAAAGGTTTGTTTGGCCTTTGTCTGTTGTTTGGGTTTGAAAAATGTTGGAAAAATGTGAGGGTGATTTATTATTATTACTTTTTATATCATAAAATGATATGTAAAATTTT