sp|Q8L7S0|ULP2B_ARATH ----> Probable ubiquitin-like-specific protease 2B
Intron 1 GTACCATAAA ... TCATGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.74 | 31 | 10 | 15 |
| A2 | 26.03 | 54 | 23 | 15 |
| A3 | 28.57 | 40 | 16 | 16 |
| A4 | 21.13 | 28 | 7 | 8 |
| A5 | 27.87 | 22 | 10 | 7 |
| A6 | 26.88 | 34 | 12 | 13 |
| A7 | 22.08 | 60 | 16 | 18 |
| A8 | 24.66 | 55 | 18 | 18 |
| A9 | 25.93 | 80 | 28 | 28 |
| A10 | 26.63 | 73 | 24 | 29 |
>TRINITY_DN127992_c1_g1_i1 from sample A1 / Example spliced isoformACTTATTACCCATTTCATGGGATTATACTTTATGGCTACAGTCCAGTTCTTTGGTGTGAATATTTTGTGTATGTTGCTGTCACGATGAAATGAACATCTCCCTTCAATTTTCAAGTACACAAAGTTGGAGAGACCGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGG
TGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGC
CATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCT
GTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGT
TGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTA
CTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTA
GTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTT
CTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCA
GGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATT
GGAAAGCTTCGGAAAGACATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTT
GTAGCTCTACACCTACCTTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAA
GATGGGACAGAACTCTGTTAGTCTAGTGACTTCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATAATCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATT
GTACTTGCACCTAGTTTTGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGAATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAAGTAATACATTT
CGATGAAGCCAAACATCAGACGATAGGAAAATGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAGGTGAG
>TRINITY_DN127992_c1_g1_i2 from sample A1 / Example unspliced isoform:ACTTATTACCCATTTCATGGGATTATACTTTATGGCTACAGTCCAGTTCTTTGGTGTGAATATTTTGTGTATGTTGCTGTCACGATGAAATGAACATCTCCCTTCAATTTTCAAGTACACAAAGTTGGAGAGACCGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGG
TGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGC
CATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCT
GTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGT
TGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTA
CTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTA
GTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTT
CTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGgtaccataaatgtattccttctttctaatctttgtttgtctttggagagaatcctttcttctcttacttttctgtaattgtggtctttagatggaattgtaatggctcgtgaccttgcagttggaaaatattgtgttggaagtctgaatagtttcaaattcatg
tgtagGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATAT
CCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGT
GTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCT
TTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACT
TCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATAATCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAA
GATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGAATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAAGTAATACATTTCGATGAAGCCAAACATCAGACGATAGGAAAA
TGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAGGTGAG
Intron 2 GTATTCCTTC ... TCATGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28 | 27 | 6 | 15 |
| A2 | 24.14 | 44 | 13 | 15 |
| A3 | 27.47 | 33 | 9 | 16 |
| A4 | 21.13 | 28 | 7 | 8 |
| A5 | 27.59 | 21 | 9 | 7 |
| A6 | 25.93 | 30 | 8 | 13 |
| A7 | 21.62 | 58 | 14 | 18 |
| A8 | 24.09 | 52 | 15 | 18 |
| A9 | 25.39 | 72 | 21 | 28 |
| A10 | 25.97 | 67 | 18 | 29 |
>TRINITY_DN127992_c1_g1_i4 from sample A1 / Example spliced isoformACTTATTACCCATTTCATGGGATTATACTTTATGGCTACAGTCCAGTTCTTTGGTGTGAATATTTTGTGTATGTTGCTGTCACGATGAAATGAACATCTCCCTTCAATTTTCAAGTACACAAAGTTGGAGAGACCGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGG
TGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGC
CATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCT
GTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGT
TGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTA
CTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTA
GTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTT
CTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGTACCATAAATGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAA
AGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATT
GTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGT
ATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATG
TCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACTTCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATAATCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTG
GTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGAATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAA
GTAATACATTTCGATGAAGCCAAACATCAGACGATAGGAAAATGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAGGTGAG
>TRINITY_DN127992_c1_g1_i2 from sample A1 / Example unspliced isoform:ACTTATTACCCATTTCATGGGATTATACTTTATGGCTACAGTCCAGTTCTTTGGTGTGAATATTTTGTGTATGTTGCTGTCACGATGAAATGAACATCTCCCTTCAATTTTCAAGTACACAAAGTTGGAGAGACCGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGG
TGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGC
CATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCT
GTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGT
TGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTA
CTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTA
GTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTT
CTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGTACCATAAATgtattccttctttctaatctttgtttgtctttggagagaatcctttcttctcttacttttctgtaattgtggtctttagatggaattgtaatggctcgtgaccttgcagttggaaaatattgtgttggaagtctgaatagtttcaaattcatg
tgtagGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATAT
CCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGT
GTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCT
TTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACT
TCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATAATCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAA
GATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGAATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAAGTAATACATTTCGATGAAGCCAAACATCAGACGATAGGAAAA
TGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAGGTGAG
Intron 3 GTTTTTGTTT ... AAAATCGGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 41.41 | 58 | 46 | 36 |
| A2 | 37.74 | 33 | 13 | 27 |
| A3 | 39.05 | 32 | 19 | 22 |
| A4 | 30.36 | 39 | 17 | 17 |
| A5 | 23.81 | 16 | 3 | 7 |
| A6 | 33.33 | 30 | 11 | 19 |
| A7 | 28.42 | 68 | 31 | 23 |
| A8 | 25.42 | 22 | 7 | 8 |
| A9 | 26.62 | 51 | 19 | 18 |
| A10 | 26.98 | 92 | 31 | 37 |
>TRINITY_DN47639_c0_g3_i1 from sample A7 / Example spliced isoformGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAAATGTCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGCCCACCTTTGGATTTGCATATAGCGCAGCGAGGTATCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTT
GAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGCCATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTG
TTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGT
TGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAAAGTTAACAAGCGCGGCCGTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGC
AGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGA
ACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGT
ATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCA
AATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCAT
ATCTAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATC
TTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAG
TGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACTTCTGATATCTTCACAGCCAGGTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATACTCATCAAATCTTAGTAATTGAGTTTTGC
TTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGA
ATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAAGTAATACATTTCGATGAAGCCAAACATCAGACGATAGGAAAATGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAAGTGAGTAATGCCATATACTCTGTTGGTCATAACAGTGATTATGA
ACAACCCCTCAT
>TRINITY_DN47639_c0_g3_i6 from sample A7 / Example unspliced isoform:GTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAAATGTCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGCCCACCTTTGGATTTGCATATAGCGCAGCGAGGTATCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTT
GAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTTTTTTGTTTTTTCATTTTCCATGTGAAAATCGGAGgtttttgtttttgtattttcattttccatgtgaaaatcggagGTTGGGCGGGCTGTTGAATCAATCCATGGCGAACTTTGGCGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGCTCCCCCTGTCA
AAGTATCTATGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACAAAAACGCAAACGTTTTTGGGAAGATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAG
GCAAAGTAGATATTGAAGGTGGGGAGAGCAGTTTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAAAGTTAACAAGCGCGGCCGTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAA
AGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACAT
GCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGG
AGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCA
TGCATGTTGCTTTTGGATTCATTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTAAGCACAAACTCTTGGCAGATCACTTTCTCCTTTACAGCCTAATTTTTGGCAGTTCTGTTATTTTTTCTTCAAAATTTATC
Intron 4 GTAAGTACGA ... TGTTTTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20 | 26 | 5 | 8 |
| A2 | 25 | 30 | 11 | 9 |
| A3 | 22.4 | 32.9 | 12 | 7 |
| A4 | 24.14 | 22 | 7 | 7 |
| A5 | 34.76 | 6.6 | 4 | 3 |
| A6 | 19.73 | 36.6 | 5 | 13 |
| A7 | 15.01 | 62.3 | 6 | 16 |
| A8 | 17.86 | 69 | 13 | 17 |
| A9 | 19.43 | 101.6 | 15 | 34 |
| A10 | 19.92 | 82.5 | 14 | 27 |
>TRINITY_DN47639_c0_g3_i11 from sample A7 / Example spliced isoformGTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCAT
TTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGCCATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGC
GCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGT
TTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAAAGTTAACAAGCGCGGCCGTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAA
AGCGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATG
AACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTT
TCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAAC
AAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATCTAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGA
CATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACC
TTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAAGATGGGACAGAACTCTG
TTAGTCTAGTGACTTCTGATATCTTCACAGCCAGGTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATACTCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATTGTACTTGCACCTAGTTT
TGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTGCCTCTTTCTATGAGGATTAAGCTACTTATATTGAATGACATGATGTTCTTTTAGATTCAAGCCCATGATTCTTGAATTAAAGTAATACATTTCGATGAAGCCAAACATC
AGACGATAGGAAAATGGCAGAAGCATATTGGAAATGTGGAGAGAACTGAACATAACTGTATACTGACATACTTTTGAAAAAGTGAGTAATGCCATATACTCTGTTGGTCATAACAGTGATTATGAACAACCCCTCAT
>TRINITY_DN47639_c0_g3_i12 from sample A7 / Example unspliced isoform:GTTGGATGTTGCGGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCAT
TTCACTTGAAGAAGCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGCCATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGC
GCTCCTGTTTACAAAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGT
TTCGAGTTGAGTTGGAGTGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAAAGTTAACAAGCGCGGCCGTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAAATAAAAGGATGAAGAAGTATCGTCGTTTTCAGAGAAA
AACGGGCAGCGGTTTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATG
AACGGGAACAGACTTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTT
TCAATGTATCTTGAAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGTACCATAAATGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCA
TTGAAGGAAACAAACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGC
TCCAGAGAATTTCAGCATATCTAATGGTTGTTATCCTTATTTTgtaagtacgaatgtctcctattgctttttttcaacaaaatctgttgtttggacagagcaattaggtgtaacgagcatgattgttgttttccagCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGT
GTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCT
TTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTTTGAAACATTAAGAGAGATTATCATTTCTTAAACTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTT
Intron 5 GTAATAAATT ... TTCTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.5 | 21.6 | 7 | 3.9 |
| A2 | 7.94 | 30.1 | 2 | 4.3 |
| A3 | 34.75 | 26.9 | 13 | 4.4 |
| A4 | 16.67 | 28 | 4 | 2.9 |
| A5 | 28.57 | 4.3 | 1 | 3.6 |
| A6 | 13.6 | 28.9 | 4 | 2.6 |
| A7 | 26.17 | 50 | 17 | 2.9 |
| A8 | 22.93 | 54.6 | 15 | 4.6 |
| A9 | 19.78 | 45.1 | 10 | 5.1 |
| A10 | 21.02 | 40.6 | 10 | 3.7 |
>TRINITY_DN108086_c0_g1_i1 from sample A5 / Example spliced isoformGGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAA
GCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGCCATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACA
AAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTGTCGAGTTGAGTT
GGAGCGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGT
TTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGAC
TTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTG
AAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGTACCATAAATGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAA
ACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTC
AGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATTGGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGAT
TGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGTACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTCTGAAACATTAAGAGAGATTATCATTTCTTAAGCTGGATTGCAAATGAGAAAGCTCTAA
AGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTTGGCATTATGTCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACTTCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATACTCATCAAATCTTAGTAATTGAGT
TTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTATTATTACCTGGTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTG
>TRINITY_DN108086_c0_g1_i2 from sample A5 / Example unspliced isoform:GGGGAGGGTTACTTTTAAGATATATGATATGAATTGTCGTGAATCGTGATGGTGGAAACTCCCTCCGACGAAGTGGGGAGACTGTCCACCTTTGGATTTGCATATGGCGCAGTGCGGTCTCTGTATTCGCAATTGTAGCTCATGTGAATTAATGGATTAAATTTGAAACCCATTGCTTTCAATCCATTTCACTTGAAGAA
GCCCATAGAAACTGCGGTTGCAGCACTTTTGTGTTTTTGTTTTTTCATTTGCCATGTGAAAATCGGAGGTTGGGCGGGCTGTTGAATCAATCCATGGAGAACTTTGGGGTTCGCAGTGGGCGCGGAAGAGGTTTAAGGAAATGGCCCCCCTGTCAAAGTATCTTTGGGAACATTCCTCGTCGCAGGCGCTCCTGTTTACA
AAAACGCAGACGTATTTGGGAAAATGTAATCTTTGACGCACATGGTGGATCTGTAAATTTAGACGCCAATTCGTCGACCGAGCACGGGCCTGCTAGAAACCCTGAAATTCAAAAAGTGGAAAATTGTGTAATTGTAAAGTTAAGAAACCCCAAAGGCAAAGTAGATATTGAAGGTGGGGAGAGCAGTGTCGAGTTGAGTT
GGAGCGCACTGAACCGGCGGATTGAAGAATTGAAATACGCGACCTTCGAAGTTGCTTTCATGGTGAAAGAGGGCTTAGCGGACCCTAGAGTTAACAAGCGCGGCCCTGTTCGAAGAAGATCCGTTTGCAAGGGCCCTGCTGTCCCTAAAGATAAAAGGATGAAGACGTATCGTCGTTTTCAGAGAAAAGCGGGCAGCGGT
TTGCACGAAGATGCCATTGTTTTGCCGTTAAATGAAGGAGATCTTGCTCGTACTTGCAAAGGCACTTTCGTTGATTCCAAAGATGGAGACTCTACAACAAGTCAACTGCAATCTTCAAGTGTAACTCGGCCTGAGAAGATTAATCCTCAACACATGCCAAGGGGTTTGTTAATCGATGTTGACGATGAACGGGAACAGAC
TTGTAAACGCTGGTCTTCTAGAAATCGGGCACATAAAAAAGCAGTGCGATTAGTGCGTAGAAATCAAGTTCCGAAGCTAGACAAGCACCTTGATACCAACATCATTGACAAATATATGGAGCAATTATGGAAGAATCTTCCCGAGGAGAAACAGGAGTCTTGTACTTTCTTGGATTGTTTGTGGTTTTCAATGTATCTTG
AAGAGGCATTATCCTTTAACATATTGAAATGGACGAAAGCAAAAAATATTTTCTCAAGGCGTTACGTTTTCATTCCAATAGTTCACTGGTACCATAAATGAGCCATTGGAATTTATTGATTCTGTGTCATTTTGGAGAGGATTTCGCTACCCAAGAAAGAACACCATGCATGTTGCTTTTGGATTCATTGAAGGAAACAA
ACCCAAATCGTCTTGAACCCCTGATAAGAAAGTTCCTCATAGAAATTCATAAAGAAGAAGGCAGGCAGGACGGGGACAAAATAATTGCAAATATCCCTCTTTTGGTTCCCGAAgtaataaattcttactcattgtatctttagaaattgtatctctgtgtttgtttttagggatagaacaggcaaattctttacttttgt
tagattcccatttcatggtctttgacaaagaagtgattcacctgaatatttaatgtgacattcttttcagGTGCCTCAGCAGACGAATGGTAATGACTGTGGCGTTTTCCTGCTCCATTTCATTGATCTTTTTTTGCAATTGGCTCCAGAGAATTTCAGCATATATAATGGTTGTTATCCTTATTTTCTCACCAAAGATT
GGTTCAATTGTGAAGAAATTGGAAAGCTTCGGAAAGACATTTACAATATGTGTTTGGAGGAACAGCACTGTGAAAGCCAGATGACAGACAGGAGAATTTCAACTAGAAGTAAAAAGTGTCAGCGTTTTGTTCATACTGATTGCATGTCAAACTGGATTGATCTTTCACGTGCTGCTTGAGGGACCAGCTGCAACACCTGT
ACAAATTGTATCATCGGCTTGTAGCTCTACACCTACCTTTTTGTATTCTCTTTGAAAGATGAGGAGAAATCACTGATATTTGTCTTTGCTGCTGGTTTCTGAAACATTAAGAGAGATTATCATTTCTTAAGCTGGATTGCAAATGAGAAAGCTCTAAAGTAGTGGTGTTGCCTTGATATGCAATTACTTCAGGCAACTTT
GGCATTATGTCAATATGCAAGATGGGACAGAACTCTGTTAGTCTAGTGACTTCTGATATCTTCACAGCCAGCTGGTGAGAGTGCTTCAGTACAAATTTAAACATCAGATGAAGTTGGCAGCTTTTAAAATATACTCATCAAATCTTAGTAATTGAGTTTTGCTTGGGTTAAAATACACGAGACATTTCAACCTGTTTTAT
TATTACCTGGTCATTAAATTGTACTTGCACCTAGTTTTGTGGCCTGTCAAAGATGGCGTGCATCTGATGCTTTTGAAAATTGGTCGATATGAACAGTTTTGTGCTCTTCTTTTTCAATGAACTGGTTG