NA ----> NA

Intron 1 GTTAGTTTGG ... AGTAATCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	39.84	333	268	173
A2	39.02	304	267	122
A3	37.34	480	403	169
A4	38.88	290	250	119
A5	39.51	196	170	86
A6	39.26	1203	985	570
A7	38.84	1552	1310	661
A8	39.45	1148	927	569
A9	39.49	1408	1163	675
A10	39.86	1297	1115	604

>TRINITY_DN104258_c0_g1_i8 from sample A5 / Example spliced isoform

CAAAACTTTTCTTTGCAAATATAATGTCTCATTCTTCTTCTTCCTTCTGGTGGATGATTAGCGCCCCATGTATATCGTAGCCCCTCTGGATTCTTTAAATAATCATAACGATCATCGTCATCTTGCACAAGGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCG
AGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGA
ATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGAGTTCGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTAAAGAAA
TGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATATGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGT
CAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAGCAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTGAATAACTATGCATTGAAACTACATCTGCGTCAGGCCGAGGAAGGAAGCTCAATGCCTGGACGTTTTCATCCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTT
TTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCGGGCATTCGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGCAATGAGCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAAAATGCTATACGTATGGATTTTTGAACTATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGC
CAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTCATTTGCAGCATTTCTGTATCATTTTCACCATGTTTTCCACAAGCTTTTGTATTGGCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGGTTATGCTGCTGGAAAATAACTTGTTATGCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTT
CAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTCAAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAACTCACCAAATATTTTTAGTTGGCAATCACTCAAGTTAACTCACCCC

>TRINITY_DN104258_c0_g1_i4 from sample A5 / Example unspliced isoform:

GAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTC
AGATAATCTGTCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGgttagt
ttggagcggcttagtaggagatttgttttactagatcattgtgtgttcgagtctttggttatacgatgctttcactgtttcttcaattgtttccttgatgtgattattcatgtaagagtgaagttatcctgaaggtaatgctgatgtctattcttgtggataatggatctgtaatgattgtttcttttgtgtatactagc
ccctggttctacaaaatcaagtgacactgtctctagtaatccagAGTTCGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTAAAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCA
GGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATATGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAGCAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACA
CTAGAG

Intron 2 GTGACATTTT ... AATAACACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	23.91	938.7	295	1
A2	18.07	693.7	153	1
A3	23.21	799	241.5	6
A4	26.29	600.2	214	6
A5	21.46	331.3	90.5	0
A6	20.84	2900.7	763.5	0
A7	20.9	3717.7	982.5	0
A8	21.65	3432.3	948.5	2
A9	19.89	3356	833	0
A10	21.11	2902.2	776.5	1

>TRINITY_DN109778_c0_g1_i5 from sample A3 / Example spliced isoform

TGAAAATATTTTGATGCTAAATAATCTCTTGATGGATCTTTTTAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTC
TACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGG
CAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATATGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAACAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTG
AATAACTATGCATTGAAACTACATCTGCGTCAGGCCGAGGAAGGAAGCTCAATGCCTGGACGTTTTCATCCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTTTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCAGGCATTCGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGC
AATGAGCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAAAATGCTATACGTATGGATTTTTGAACTATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGCCAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTCATTTGCAGCATTTCTGTATCATTTTCACCATGTTTTCCACAAGCTTTTG
TATTGGCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGGTTATGCTGCTGGAAAATAACTTGTTATGCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTTCAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTCAAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAAC
TCACCAAATATTTTTAGTTGGCAATCAC

>TRINITY_DN109778_c0_g1_i2 from sample A3 / Example unspliced isoform:

ATTACGAAGACATTTAGCTTCCTTTTCACTACTCTTTCGGAATTTGCTTTAGTAACGTTTTGGCATACTGGATATGCACGTGGGAGGCACGGCACATATATGATGCGGATGACGAGGAACTGAATTTGTATGTCGCCCAAAACTTTTCTTTGCAAATATAATGTCTCATTCTTCTTCTTCCTTCTGGTGGATGATTAGCG
CCCCATGTATATCGTAGCCCCTCTGGATTCTTTAAATAATCATAACGATCATCGTCATCTTGCACAAGGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTC
GAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTC
TGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATT
TGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGgtgacattttttttaaattttattttcttaaataaatgaaaattcattttgattagtgcttagttgcaattgtgtttaaatatatatttctttcaataacacagG
AAAATACTTCCCTCG

Intron 3 GTTAGTTTGG ... TGTATACTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	8.31	718	157.3	66.3
A2	6.51	557.8	157.2	39.3
A3	5.31	799	236.4	45.3
A4	8.85	553.5	146.8	54.7
A5	7.91	345	100	30.2
A6	8.72	2135.6	578.8	208.1
A7	7.66	2797.5	767.7	235.8
A8	8.75	2100.8	543.6	205.3
A9	7.47	2637	682.4	216.3
A10	7.96	2303.8	654.5	202.8

>TRINITY_DN110080_c2_g5_i6 from sample A2 / Example spliced isoform

CGTGGGAGGCACGGCACATATATGAAGCGGATGACGAGGAACTGAATTTGTATGTCGCCCAAAACTTTTCTTTGCAAATATAATGTCTCATTCTTCTTCTTCCTTCTGGTGGATGATTAGCGCCCCATGTATATCGTAGCCCCTCTGGATTCTTTAAATAATCATAACGATCATCGTCATCTTGCACAAGGAGGAGTAGG
AGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTG
TCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAA
ATCAAGTGACACTGTCTCTAGTAATCCAGAGTTCGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTAAAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATAT
CTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATCTGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAGCAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTGAATAAC
TATGCATTGAAACTACATCTGCGTCAGGCCGAGGAAGGAAGCTCAATGCCTGGACGTTTTCATCCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTTTTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCGGGCATTCGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGCAATGA
GCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAAAATGCTATACGTATGGATTTTTGAACTATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGCCAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTCATTTGCAGCATTTCTGTATCATTTTCACCATGTTTTCCACAAGCTTTTGTATTG
GCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGGTTATGCTGCTGGAAAATAACTTGTTATGCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTTCAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTCAAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAACTCACC
AA

>TRINITY_DN110080_c2_g5_i5 from sample A2 / Example unspliced isoform:

ATTTAAGTAGCTTGGGAATTCAGTGTAATATCCTGTGTTTTTGGAATATCATGAAAATATTTTGATGCTAAATATTCTCTTGATGGATTTTTTAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCA
GTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGgttagtttggagcggcttagtaagagatttgttttactagatcattgtgtgttcgagtctttggttatacgatgctttcactgtttcttcaattgtttccttgatgtgattattcatgtaagagtgaagttatcctgaaggtaatgctgatgtctattct
tgtggataatggatctgtaatgattgtttcttttgtgtatactagCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTT

Intron 4 GTATGTCGCC ... CTTGCACAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	80.49	32	5	132
A2	73.76	47.7	9	134
A3	70.28	68.5	10	162
A4	75.46	40	5	123
A5	76.53	23	0	75
A6	75.45	157.8	18.7	485
A7	72.94	204	27.7	550
A8	72.32	127.8	8.3	334
A9	74.29	200	15.7	578
A10	69.95	221.7	22.7	516

>TRINITY_DN109778_c0_g1_i1 from sample A3 / Example spliced isoform

ATTACGAAGACATTTAGCTTCCTTTTCACTACTCTTTCGGAATTTGCTTTAGTAACGTTTTGGCATACTGGATATGCACGTGGGAGGCACGGCACATATATGATGCGGATGACGAGGAACTGAATTTGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGG
TTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCT
TGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTGGGCAGATCGATGGTAAATCTGGCATCCC
GGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATATGCTTCAAGAAA
ATAATGTCCTGAAGCGTGCTGTAGCCATTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAACAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTGAATAACTATGCATTGAAACTACATCTGCGTCAGGCCGAGGAAGGAAGCTCAATGCCTGGACGTTTTCAT
CCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTTTTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCAGGCATTCGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGCAATGAGCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAAAATGCTATACGTATGGATTTTTGAACT
ATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGCCAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTCATTTGCAGCATTTCTGTATCATTTTCACCATGTTTTCCACAAGCTTTTGTATTGGCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGGTTATGCTGCTGGAAAATAACTTGTTAT
GCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTTCAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTCAAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAACTCACCAAATATTTTTAGTTGGCAATCAC

>TRINITY_DN109778_c0_g1_i2 from sample A3 / Example unspliced isoform:

ATTACGAAGACATTTAGCTTCCTTTTCACTACTCTTTCGGAATTTGCTTTAGTAACGTTTTGGCATACTGGATATGCACGTGGGAGGCACGGCACATATATGATGCGGATGACGAGGAACTGAATTTgtatgtcgcccaaaacttttctttgcaaatataatgtctcattcttcttcttccttctggtggatgattagcg
ccccatgtatatcgtagcccctctggattctttaaataatcataacgatcatcgtcatcttgcacaagGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTC
GAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCTTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTC
TGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATT
TGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGTGACATTTTTTTTAAATTTTATTTTCTTAAATAAATGAAAATTCATTTTGATTAGTGCTTAGTTGCAATTGTGTTTAAATATATATTTCTTTCAATAACACAGG
AAAATACTTCCCTCG

Intron 5 GTATGTCGCC ... TATATCGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	68.57	44	5	96
A2	66.67	41	9	82
A3	77.04	31	10	104
A4	73.33	28	5	77
A5	67.09	26	0	53
A6	69.66	142	14	326
A7	66.92	176	22	356
A8	63.93	110	6	195
A9	68.64	175	11	383
A10	66.82	147	17	296

>TRINITY_DN38226_c0_g1_i2 from sample A9 / Example spliced isoform

TTTCACTACTCTTTCGGAATTTGCTTTAGTAACGTTTTGGCATACTGGATATGCACGTGGGAGGCACGGCACATATATGATGCGGATGACGAGGAACTGAATTTCCCCTCTGGATTCTTTAAATAATCATAACGATCATCGTCATCTTGCACAAGGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAG
GCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCCCATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCCTATTTCCGGCCATGGATCC
CCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAGTTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTG
GGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCATCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAA
GAACAGGTGCAAAATATGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAGCAGCTACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTGAATAACTATGCATTGAAACTACATCTGCGTCAGGCCGAGGA
AGGAAGCTCAATGCCTGGACGTTTTCATCCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTTTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCAGGCATTCGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGCAATGAGCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAA
AATGCTATACGTATGGATTTTTGAACTATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGCCAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTCATTTGCAGCATTTCTGTATCATTTTCGCCATGTTTTCCACAAGCTTTTGTATTGGCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGG
TTATGCTGCTGGAAAATAACTTGTTATGCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTTCAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTCAAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAACTCACCAAATATTTTTAGTTGGCAATCACTCAAGTTAACTCA
CCAAATTTTTTCAGTTCGCTGATTGTTGAATTTATTCAGTTTGCTGATTGTTGAATGAATGCTGTAGTTGTTAATTGTTCATTACGATGGGTACTTAAATCATTCAAGTTAACTCA

>TRINITY_DN38226_c0_g1_i6 from sample A9 / Example unspliced isoform:

TTTCACTACTCTTTCGGAATTTGCTTTAGTAACGTTTTGGCATACTGGATATGCACGTGGGAGGCACGGCACATATATGATGCGGATGACGAGGAACTGAATTTgtatgtcgcccaaaacttttctttgcaaatataatgtctcattcttcttcttccttctggtggatgattagcgccccatgtatatcgtagCCCCTC

TGGATTCTTTAAATAATCATAACGATCATCGTCATCTTGCACAAGGAGGAGTAGGAGGAGACGAGACGAAAGAGGGAGGGAGGTGGGAAGGCGGGGAGGCACTGAAGGAGGTCGAGGGTTCGATTCTGGGCAGCTGCCATGTCTGCAGCAGTCTGCGGGAAGCGTCTGCCGCCTTTCGAGGACGTCCACGGATCGCCTCC
CATTGTTGCCAAAAGACTGCGTTACACCTCCTCCCTTTCTCCTTCAGATAATCTGTCCAGGCTCATAGCCCTATTTCCGGCCATGGATCCCCAGCTGGTGGAGAGTGTGTTCGAATCTTGTGATGAAAACATGGATCATGCCATCACGAGCCTCAGTAATCTGTGCCTTAACCCTTCTGAGAAGAATATATTTACTGCAG
TTGATGGTTTGGTTCATTCAGATGGCCAACCAGTTCAAGCCCCTGGTTCTACAAAATCAAGTGACACTGTCTCTAGTAATCCAGAGTTTGGGCAGATCGATGGTAAATCTGGCATCCCGGCTGATGGAGTAGAGTGGGTTGAATTTCTTGTTATAGAAATGAAGAATGCATCTAATTTGGATGATGCAAGGGCTCGTGCA
TCAAGGATTTTGGAGGCATTTGAGAAAACTGTAATGTCCAGGTCCGGGGCAATATCTGAGGTTCTTTGTAAGGAAAATACTTCCCTCAAAGAACAGGTGCAAAATATGCTTCAAGAAAATAATGTCCTGAAGCGTGCTGTAGCTGTTCAACATGAACGTCAGTTGGAGCAGGAAGAAAAGTCAAAAGAAGTGCAGCAGCT
ACGGCAGCTTGTTGCTCAATACCAAGAGCAGGTTAGAACACTAGAGTTGAATAACTATGCATTGAAACTACATCTGCGTCAGGCCGAGGAAGGAAGCTCAATGCCTGGACGTTTTCATCCAGATATATTTTAGGAGGATGCTCGAAACAAGATTTTTTTTTTTGGCAATGGGGATTTTCCTTTCAAGTCAATCAGGCATT
CGATTCTGTTATATGTATATACTGGGCACTGATAGGATTTTTTATGTGCAATGAGCTGGTGCGGGATTACTGGTACTGATTTTTGTAAAAAATGCTATACGTATGGATTTTTGAACTATTCCTAAAACCCCAATATTCGTTGTAAAGAAAGGCTTGGCCAAGACAAAGACCATACGCATTTCTCGACTGTTATATTCTTC
ATTTGCAGCATTTCTGTATCATTTTCGCCATGTTTTCCACAAGCTTTTGTATTGGCATACATGGCAGCGGAAATCTTTTCGAGTTTTTGGTTATGCTGCTGGAAAATAACTTGTTATGCATGAGGTGTCGTTGATCTTCAGCCCATGCGCTCCATCTTCAGTGTCGACTTTTTAAGCTCATGATAGAAAATTATACATTC
AAAAGGTTGTACGTTTCAATTTATTCAGTTCGCAATCACTCAAGTTAACTCACCAAATATTTTTAGTTGGCAATCACTCAAGTTAACTCACCAAATTTTTTCAGTTCGCTGATTGTTGAATTTATTCAGTTTGCTGATTGTTGAATGAATGCTGTAGTTGTTAATTGTTCATTACGATGGGTACTTAAATCATTCAAGTT
AACTCA