NA ----> NA
Intron 1 GTTTTGTTAG ... TTTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.12 | 44 | 17 | 8 |
| A2 | 20.67 | 71 | 27 | 10 |
| A3 | 29.84 | 67 | 37 | 20 |
| A4 | 23.81 | 24 | 11 | 4 |
| A5 | 22.35 | 33 | 12 | 7 |
| A6 | 22.18 | 728 | 292 | 123 |
| A7 | 23.59 | 597 | 269 | 99.7 |
| A8 | 23.1 | 521 | 197 | 116 |
| A9 | 22.25 | 538 | 212 | 96 |
| A10 | 22.59 | 533 | 241 | 70 |
>TRINITY_DN44513_c1_g4_i2 from sample A6 / Example spliced isoformCGGTAGAGTTTAAATCCCACGCTGGGATAGATTCATCGAGAAGATTTTAAGGGGTCAAGGCTTTAAGGATTTATAAGTTGTTCATTGTATCTATACTCCATTTTCAGCTGGATTCGACATACGAGAATGGCGCAGACGGGAGCAGATTTACAGGCCCTCTTCCCTCACAGGAAGAAGATCAATTCCAATACTTCTTCTGC
CAAATCCAGCAAGAAACAGCTGGATGCTTATCCTTCAATCAATAGCGATGCTAAGCTCTCTATCGCCAACGTCGCTACAGATGACGAGAAGGATGAAGTGGAGGAGATATTGAGGGAGTTTGACATGGACTCGAGCTACGGGCCGTGCTTGGGGCTGAGCAGAATGGAGCGCTGGCAGCGTGCGACGGGGCTTGGGCTGA
ATCCTTCCCACCAAATTAAGGACATTCTTGAGAGGGCTGGAGGAATGCCCAACTGTCTCTGGGAAGGGCGTGTGTAGGTTCTGTGTACCGTATTTTGGGGAAACATTGCCCTCGGGAAGGGCAATTTTGGAATGTATGTAACCCTTTGTTTAGGGTTTTGCGATTAGGGTTTCGTTAGTGTAGTTCAAAAGGGTTTGAAC
TTGTCAATATTTAGGGCTTGGACGGTAATCCAAGTTCATTTGCAGTCTTAAACTGAATATATTTTTGTTGCTGTTATTTTAGTGTCTGAAATAGAGTGAACGTGCATTTCAATTCTCTCGGACCAATTCAATCTCTGAGATTATGTGTTTCTTCGATATTTGCAATTTTATTTCTTGGTTTTTAAAAAGTCTTTGGTGTA
TTTCAGACAAAATATGATGATGGATAACAATGCTCAGTTTTTTTTCGCCATTGGTGATGTCATTTACTGGTGAAGTTTCAGAGTGTTGTCTTACCCTGACCGCCAGGGTTTCATTCATATTGTGTTTTCCCACTTCAAAACAGGAACAAATCT
>TRINITY_DN44513_c1_g4_i1 from sample A6 / Example unspliced isoform:CGGTAGAGTTTAAATCCCACGCTGGGATAGATTCATCGAGAAGATTTTAAGGGGTCAAGGCTTTAAGGATTTATAAGTTGTTCATTGTATCTATACTCCATTTTCAGCTGGATTCGACATACGAGAATGGCGCAGACGGGAGCAGATTTACAGGCCCTCTTCCCTCACAGGAAGAAGATCAATTCCAATACTTCTTCTGC
CAAATCCAGCAAGAAACAGCTGGATGCTTATCCTTCAATCAATAGCGATGCTAAGCTCTCTATCGCCAACGTCGCTACAGgttttgttagctccctcccatatataaccatttgctggctttccttgctgtttcagacccgttttgctaagatttataatgtttgattttgttgcagATGACGAGAAGGATGAAGTGGAG
GAGATATTGAGGGAGTTTGACATGGACTCGAGCTACGGGCCGTGCTTGGGGCTGAGCAGAATGGAGCGCTGGCAGCGTGCGACGGGGCTTGGGCTGAATCCTTCCCACCAAATTAAGGACATTCTTGAGAGGGCTGGAGGAATGCCCAACTGTCTCTGGGAAGGGCGTGTGTAGGTTCTGTGTACCGTATTTTGGGGAAA
CATTGCCCTCGGGAAGGGCAATTTTGGAATGTATGTAACCCTTTGTTTAGGGTTTTGCGATTAGGGTTTCGTTAGTGTAGTTCAAAAGGGTTTGAACTTGTCAATATTTAGGGCTTGGACGGTAATCCAAGTTCATTTGCAGTCTTAAACTGAATATATTTTTGTTGCTGTTATTTTAGTGTCTGAAATAGAGTGAACGT
GCATTTCAATTCTCTCGGACCAATTCAATCTCTGAGATTATGTGTTTCTTCGATATTTGCAATTTTATTTCTTGGTTTTTAAAAAGTCTTTGGTGTATTTCAGACAAAATATGATGATGGATAACAATGCTCAGTTTTTTTTCGCCATTGGTGATGTCATTTACTGGTGAAGTTTCAGAGTGTTGTCTTACCCTGACCGC
CAGGGTTTCATTCATATTGTGTTTTCCCACTTCAAAACAGGAACAAATCT