sp|F4I2J8|CATIN_ARATH ----> Splicing factor Cactin

Intron 1 GTAAGTGAAT ... TCTTTACCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	31.65	54	4	25
A2	17.02	39	0	8
A3	20	56	1	14
A4	18.75	13	1	3
A5	39.39	20	3	13
A6	17.65	14	0	3
A7	16.46	132	0	26
A8	27.5	87	0	33
A9	26.34	137	0	49
A10	22.64	123	0	36

>TRINITY_DN129043_c2_g1_i6 from sample A1 / Example spliced isoform

TGGCCACACTCATCCGGGTGTGGGCTGACAAAAAGACACATTTTCTAATACATATCGTCTTAATTTGTTTGTGTAGACAATCTGCTTCTTGCACTGAGAACGCAACTTCTTTCTGCAAGTCGAGTTTTATCCATATCCATACAGAAGTACCTTAGCGTGAATGAACTTAAAAATGTTGTAGATGTCCCGTGAAAAATTTA
CAACCGATAATCTAAACAAAATGCCACAGAGAGAGATAGAAGACAGGGAAAAGGAGGGCAGCAGAAGCCGCGATAATCATCGATCGGATCGTAAAAGAGGCAGTCGCAAACACGACGTAACTTCGGAGGAAGACTCGGACACTCAAAGCAACGATTCTGAATCCAGCGAGGACGATAGACGTAGAAGATCGAGGCGCAGT
TCTTCCAGAAGGTCCGGGAAGGATTCTTCTAGAAAGAAAAGCAACACCAGCAGCAGCAGAAGACGCCATAGATCTTCCGAGACGCCCACCGACTCAGAGAGCGAAGATGAAGACGAGCCCCCTAAGAAGAAAAGGACGTTGAGAAAGATCACCGATGAAGAAATTAATGAGTATCTCGGGAAAAAAGCCCAGAAAAGGGC
GGCGAAAGTTGCAAAGAAGCTGAAAACCCAGACAGTCTCGGGCTATTCGAACGATTCTAATCCTTTCGGAGACTCCAACTTGAATGAGAAATTTGTCTGGAGGAAGAAGATAGAACGAGATGTTACACAAGGAATGTCATTGGAGGAATTGTCTGTGAAAGCTGAGAAGAAACGACGAAGGGAAAGAATGGCAGAAATTG
AGAAGGTTAAAAAGAGGAGGGAAGAAAGAGCTATTGAAAAGGCTCAGCATGAAGAGGAAATGGCAATGTTGGCTAGGGAGCGTGCCAGAGCTGAGTTCCTAGACTGGGAAAAGAAAGAGGAAGAGTTCCATTTTGATCAAAGCAAAGTTCGTTCAGACATTAGACTGCGCGAGGGTCGAGCCAAACCCATTGATATTCTT
TCAAAGAACTTGAATCTTTCTAAAGACTTTGATATTGAAATAAATGAGCCATACACTATATTCAAGGGTCTTACTGTGAAGGAAATGGAAGAACTTCAGGAAGACATAAAGATGCATCTAGAGTTGGATCGAGCAACTCCAACACACATTGAATTTTGGGAGGCTTTAATGGTAGTCTGTGACTGGGAGATAGCAGAGGC
TCGTAAAAGGGATGCACTTGACCGAGCCCGGGTGCGTGGAGAGCAGCCACCCACAGAGCTTCTTGCAGAAGAGAGGGGCTTACATGCTAGCATTGATGAAGAAGTTAGGAGTTTGTTGCAAGGTAAAACCTACAATGAGCTGTATGAGTTACAGTGTCAAATTGAATCTCAAATGCTTTCTGGGACTGCCAAAGTTGTAG
AATATTGGGAGGCAGTGTTGAAACGGCTTCAGATCTATAAAGCAAAGAGGGAGAAGTTACCATGAACAAAAATGCTTGGGGAAG

>TRINITY_DN129043_c2_g1_i4 from sample A1 / Example unspliced isoform:

GAAAAGAAAGAGGAAGAGgtaagtgaatattttggcatcatttgcttacatggcagagaacctatggttattttgtgtaaagttatagactttgtgcttttaaatttcaaattctcagtgggatctaaaatctataaaaattaaggcctcttaattgttgccttggttgatagttatgctgaaataactttattctaatc
cactttgatctttaccagTTCCATTTTGATCAAAGCAAAGTTCGTTCAGACATTAGACTGCGCGAGGGTCGAGCCAAACCCATTGATATTCTTTCAAAGAACTTGAATCTTTCTAAAGACTTTGATATTGAAATAAATGAGCCATACACTATATTCAAGGGTCTTACTGTGAAGGAAATGGAAGAACTTCAGGAAGACAT
AAAGATGCATCTAGAGTTGGATCGAGCAACTCCAACACACATTGAATTTTGGGAGGCTTTAATGGTAGTCTGTGACTGGGAGATAGCAGAGGCTCGTAAAAGGGATGCACTTGACCGAGCCCGGGTGCGTGGAGAGCAGCCACCCACAGAGCTTCTTGCAGAAGAGAGGGGCTTACATGCTAGCATTGATGAAGAAGTTA
GGAGTTTGTTGCAAGGTAAAACCTACAATGAGCTGTATGAGTTACAGTGTCAAATTGAATCTCAAATGCTTTCTGGGACTGCCAAAGTTGTAGAATATTGGGAGGCAGTGTTGAAACGGCTTCAGATCTATAAAGCAAAGGCCCGCCTCAAGGAAATTCATGCAGGCCTTCTGCGTCAGCACTTGCGACAACTACAAGAA
TCAGACAGCAATGAGCACCAGATATCTAAAGAAGAGGTGGATGTGGGACATGATGATGAGTACACAGAGGGAGCCGTGGAAGATACTGGACCTTACTCTCCTGAACTGGTTCCATTGGAGAAAGAAGTAAAGGAGCTAGAAGAAGAACCTGGATCATTTTCACCAGAGTTGTTGCATGATTCTGAAGGAGAAGAAGGTCT
TGATCCAGAAGCTGACAAGGCAGAACTGGAACGAAGACGGGCTGCTGTATTAGAAGAGCAACAGCGGAGGTTGCAGGAAGCTGCTGCAGGGCCCAGCACCGTCGAGGATAGGATTGAACTGACAAATCAGGAGAGGACACTCGCTATGAAGGCAATGGGAGCGATTGAAGAAGGAGATGCAGTAATGGGTTCTGGTGCTG
AAGTAAATCTTGAATCACAGGTTTATTGGTGGCATGATAAATATCGTCCACGGAAGCCAAAATACTTCAACCGAGTACATACGGGGTATGAATGGAACAAGTATAATCAGACACATTATGACCATGATAATCCTCCTCCAAAGATTGTACAGGGATACAAGTTCAACATATTTTATCCGGATCTAGTTGATAAAATAAAA
GCTCCTACATATACAATTGAGAAGGATGGAAGCAATGGTGAAACATGCCTGATAAGATTTCACGCTGGACCCCCATATGAGGACATTGCCTTTCGCATTGTCAATAAAGAATGGGAATATTCACATAAGAAAGGATTCAAATGCACTTTTGAACGGGGTATCTTGCATGTCTATTTCAACTTCAAACGTTACAGATATCG
CCGATAAGAACTGGTTTTACAAGTCGAACGAAGAATTGGCCATATTGTAGTTGCTACCTATATCAAAGGTCTAACTCGTAGAATGTTCTCCAGAGGTCTTGCTTTTAAATTTATGCTCCAGAGTTTTATTTCAGAAGGCGAACTCATCATGGAAATCCGATGTAAATTGTATTAATCAAAATAAGATGCAAGTTATCCTC
TCTTTTTTCATAATTTGGTCGAGGAAATTTTGTTTTCTCTTGATCAAAAAGTGTTGGTTGCTTGTATGCTTGGATATATTTTTCGAACTTGTGTTTGCTCTGCTTATAGGAATCCGATTGCTTGGAGAAAAGAAGGGGATAAAGAGTTTACAGATTCCCATGATAAATAATGGTATTATGCATTGATGATATATCTTAAA
GAATAGGGAGATGTGCGATTG