sp|Q9SK03|RAP27_ARATH ----> Ethylene-responsive transcription factor RAP2-7
Intron 1 GTAACTCTTT ... GTTACGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 0 | 1 |
| A2 | -1 | 0 | 0 | 1 |
| A3 | 66.67 | 1 | 2 | 2 |
| A4 | 100 | 0 | 5 | 1.5 |
| A5 | 70.77 | 2 | 6 | 3.8 |
| A6 | 52.54 | 9.5 | 10 | 11 |
| A7 | 64.1 | 4 | 7 | 7.4 |
| A8 | 65.05 | 8 | 17 | 12.9 |
| A9 | 65.07 | 5.5 | 12 | 8.5 |
| A10 | 81.06 | 3 | 13 | 13.3 |
>TRINITY_DN42435_c0_g2_i2 from sample A6 / Example spliced isoformCCGCTGGTTCTTCACTGGTTTTCGGTCGTCCTGCTCGCACTGCGCTGCATATTTGCCGTGTTCAACAAGTTTCAATTTTCTGAGCAACAACAGGTTTTGAGAACTGTGTTTGTGGTTAGGGTTTCGATGGGCGACGGTGCATTCCTCGGCTCTCCAAGGTCTAGAGAGGAGCTCTAAGGTGAAAGTTTAAAGAAATGGTG
CCTTTGTCGATTTCGAAGGGTCTGGAGTTACCCAATCTCTCATTGCTCCTCCAAGATTACGTCCTTGGACGCCACTGCGCAATCCTCAGGTAATGAGCCTTCTGGGAACGGCAAGACAGGCGTGGCCAGCGTTTCGAAGGAGATTTCAGGTGTGGCCGTCGTTTCGAAGGCCATTTCAGTGAATGTTTTCTCAATCAATT
AACACATACAACTCACAGACTTATTATCTGGAATGGAGAACTGTCGAAGACGCAATGAAGGGATGTGGATTATATAGAAAACGCACTCTCTAATTCCGAACATCCAGCTTACTTCAATGGTCGTTGAATAAATTCGCGGTCCTGTGAACCTGTTTTTGTTATGGTTCAGACATAATCGATTCCTTCAGCTTACCAACGTC
AGTAAAGAATAATTCATGCATATACTTTGTCATCAAAGCAATGGTTTCTCTCGAGGAAGTTCCAAGTATAGAGTCATCCTGACACTGCACAAGTGCGGTCGATGGGAAGCCAGGATGCGACTATTGTTTTGCTCAGAGTTGAGTGAGAGATATTGGGAAAGATGTGGTACCTCTATTTAAAGAGATTGAGGGCCTCGCTC
AGCGAGCTGCGCCTCACGGGTCATTTCATTCTTAACCCCTCTTTGTACTATTTGGGTTTTACTTCTTTATCAAAGTTGCTTACTGTATATTGCAATCTTTTGTCCCATAG
>TRINITY_DN42435_c0_g2_i3 from sample A6 / Example unspliced isoform:CCGCTGGTTCTTCACTGGTTTTCGGTCGTCCTGCTCGCACTGCGCTGCATATTTGCCGTGTTCAACAAGTTTCAATTTTCTGAGCAACAACAGGTTTTGAGAACTGTGTTTGTGGTTAGGGTTTCGATGGGCGACGGTGCATTCCTCGGCTCTCCAAGGTCTAGAGAGGAGCTCTAAGGTGAAAGTTTAAAGAAATGGTG
CCTTTGTCGATTTCGAAGGGTCTGGAGTTACCCAATCTCTCATTGCTCCTCCAAGATTACGTCCTTGGACGCCACTGCGCAATCCTCAGGTAATGAGCCTTCTGGGAACGGCAAGACAGGCGTGGCCAGCGTTTCGAAGGAGATTTCAGGTGTGGCCGTCGTTTCGAAGGCCATTTCAGTGAATGTTTTCTCAATCAATT
AACACATACAACTCACAGACTTATTATCTGGAATGGAGAACTGTCGAAGACGCAATGAAGGGATGTGGATTATATAGAAAACGCACTCTCTAATTCCGAACATCCAGCTTACTTCAATGGTCGTTGAATAAATTCGCGGTCCTGTGAACCTGTTTTTGTTATGGTTCAGACATAATCGATTCCTTCAGCTTACCAACGTC
AGTAAAGAATAATTCATGCATATACTTTGTCATCAAAGCAATGGTTTCTCTCGAGGAAGTTCCAAGTATAGAGTCATCCTGACACTGCACAAGTGCGGTCGAAGGGAAGCCAGGATGCGACTATTGTTTTGCTCAGAGgtaactctttttcagtcgagggttttaaatactgaaaccgttgttttgatccagccgagggt
tctaatctatatcttttttatttctacctattgtttgttacgcaagttgagtgagagctattgggaaagatgtggttctaatgtatagcttttttatttctacctattgtttgttacgcaagTTGAGTGAGAGATATTGGGAAAGATGTGGTACCTCTATTTAAAGAGATTGAGGGCCTCGCTCAGCGAGCTGCGCCTCA
CGGGTCATTTCATTCTTAACCCCTCTTTGTACTATTTGGGTTTTACTTCTTTATCAAAGTTGCTTACTGTATATTGCAATCTTTTGTCCCATAG
Intron 2 GTAAATTCTC ... GTTTCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.43 | 1 | 0 | 5 |
| A2 | 37.5 | 2 | 0 | 2 |
| A3 | 0 | 0.5 | 0 | 0 |
| A4 | 100 | 0 | 1 | 0 |
| A5 | 100 | 0 | 2 | 0 |
| A6 | 46.47 | 13.5 | 14 | 9 |
| A7 | 46.92 | 8.5 | 8 | 7 |
| A8 | 45.02 | 10.5 | 13 | 4 |
| A9 | 38.55 | 6 | 4 | 3 |
| A10 | 100 | 0 | 9 | 0 |
>TRINITY_DN43067_c0_g1_i3 from sample A7 / Example spliced isoformTGGTTTTCGGTCGTCCTGCTCGCACTGCGCTGCATATTTGCCGTGTTCAACAAGTTTCAATTTTCTGAGCAACAACAGGTTTTGAGAACTGTGTTTGTGGTTAGGGTTTCGATGGGCGACGGTGCATTCCTCGGCTCTCCAAGGTCTAGAGAGGAGCTCTAAGGTGAAAGTTTAAAGAAATGGTGCCTTTGTCGATTTCG
AAGGGTCTGGAGTTACCCAATCTCTCATTGCTCCTCCAAGATTACGTCCTTGGACGCCACTCCGCAATCCTCAGGTAATGAGCCTTCTGGGAACGGCAAGACAGGCGTGGCCAGCGTTTCGAAGGAGATTTCAGGTGTGGCCGTCGTTTCGAAGGCCATTTCAGTGAATGTTTTCTCAATCAATTAACACATACAACTCA
CAGACTTATTATCTGGAATGGAGAACTGTCGAAGACGCAATGAAGGGATGTGGATTATATAGAAAACGCACTCTCTAATTCCGAACATCCAGCTTACTTCAATGGTCGTTGAATAAATTCGCGGTCCTGTGAACCTGTTTTTGTTATGGTTCAGACATAATCGATTCCTTCAGCTTACCAACGTCAGTAAAGAATAATTC
ATGCATATACTTTGTCATCAAAGCAATGGTTTCTCTCGAGGAAGTTCCAAGTATAGAGTCATCCTGACACTGCACAAGTGCGGTCGATGGGAAGCCAGGATGCGACTATTGTTTTGCTCAGAGTTGAGTGAGAGATATTGGGAAAGATGTGGTACCTCTATTTAAAGAGATTGAGGGCCTCGCTCAGCGAGCTGCGCCTC
ACGGGTCATTTCATTCTTAACCCCTCTTTGTACTATTTGGGTTTTACTTCTTTATCAAAGTTGCTTACTGTGTATTGCAATCTTTTGTCCCATAGGGTTTCTCCTTATGTGGTTTCGAAGGATATTTTGTAGCATGCCCATGAACTTGATATTTGATCCGTAACAATAAGTTACTTTGGTGACAGTTGGACATTCAATCA
AATTTTATAGAGTTAAATTAGTTCACAAAAATTCAGATTGATTTGAAGGCTTCGAGCCTCAGCTTATGTATTGCAAAAGTAAACGTTATCTTTTCTATTTAACGTCATGCACTTGGAG
>TRINITY_DN43067_c0_g1_i2 from sample A7 / Example unspliced isoform:TGGTTTTCGGTCGTCCTGCTCGCACTGCGCTGCATATTTGCCGTGTTCAACAAGTTTCAATTTTCTGAGCAACAACAGGTTTTGAGAACTGTGTTTGTGGTTAGGGTTTCGATGGGCGACGGTGCATTCCTCGGCTCTCCAAGGTCTAGAGAGGAGCTCTAAGGTGAAAGTTTAAAGAAATGGTGCCTTTGTCGATTTCG
AAGGGTCTGGAGTTACCCAATCTCTCATTGCTCCTCCAAGATTACGTCCTTGGACGCCACTCCGCAATCCTCAGGTAATGAGCCTTCTGGGAACGGCAAGACAGGCGTGGCCAGCGTTTCGAAGGAGATTTCAGGTGTGGCCGTCGTTTCGAAGGCCATTTCAGTGAATGTTTTCTCAATCAATTAACACATACAACTCA
CAGACTTATTATCTGGAATGGAGAACTGTCGAAGACGCAATGAAGGGATGTGGATTATATAGAAAACGCACTCTCTAATTCCGAACATCCAGCTTACTTCAATGGTCGTTGAATAAATTCGCGGTCCTGTGAACCTGTTTTTGTTATGGTTCAGACATAATCGATTCCTTCAGCTTACCAACGTCAGTAAAGAATAATTC
ATGCATATACTTTGTCATCAAAGCAATGGTTTCTCTCGAGGAAGTTCCAAGTATAGAGTCATCCTGACACTGCACAAGTGCGGTCGATGGGAAGCCAGGATGCGACTATTGTTTTGCTCAGAGGTAACTCTTTTTCAGTCGAGGGTTTTAAATACTGAAACCGTTGTTTTGATCCAGCCGAGGGTTCTAATCTATATCTT
TTTTATTTCTACCTATTGTTTGTTACGCAAGTTGAGTGAGAGCTATTGGGAAAGATGTGGTTCTAATGTATAGCTTTTTTATTTCTACCTATTGTTTGTTACGCAAGTTGAGTGAGAGATATTGGGAAAGATGTGGTACCTCTATTTAAAGAGgtaaattctcatttcttatctctacagagttataggaatatactaat
tttccatatttatactagggttttgttaagaatcccttcagaatccctttcattgattttgcgtgaaagattgtaatcttatttccggtttaaactttttttaaacgctgccattatcatagtttatttaacttataaatttttaaatgatgaaaactaatcactcttttcgtttcaacagATTGAGGGCCTCGCTCAGC
GAGCTGCGCCTCACGGGTCATTTCATTCTTAACCCCTCTTTGTACTATTTGGGTTTTACTTCTTTATCAAAGTTGCTTACTGTGTATTGCAATCTTTTGTCCCATAGGGTTTCTCCTTATGTGGTTTCGAAGGATATTTTGTAGCATGCCCATGAACTTGATATTTGATCCGTAACAATAAGTTACTTTGGTGACAGTTG
GACATTCAATCAAATTTTATAGAGTTAAATTAGTTCACAAAAATTCAGATTGATTTGAAGGCTTCGAGCCTCAGCTTATGTATTGCAAAAGTAAACGTTATCTTTTCTATTTAACGTCATGCACTTGGAG